NZ_CP0428851..167966

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 167966 bp
Accession: NZ_CP042885        Location: 1..167966         Organism: Escherichia coli O10:H32 strain NMBU-W12E19       Replicon: plasmid pNMBU-W12E19_01


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FVP48_RS00010 () 1..858 + 858 WP_173002156.1 incFII family plasmid replication initiator RepA -
FVP48_RS00015 () 1768..2052 + 285 WP_001178087.1 ribbon-helix-helix domain-containing protein Antitoxin Detail
FVP48_RS00020 () 2052..2285 + 234 WP_173002157.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
FVP48_RS00025 () 2319..3016 + 698 Protein_4 IS1 family transposase IS1G Transposase
FVP48_RS00030 () 3156..3758 - 603 WP_173002158.1 proQ/FINO family protein -
FVP48_RS00035 () 3934..4986 - 1053 WP_000655519.1 hypothetical protein -
FVP48_RS00040 () 5199..5789 - 591 WP_001401589.1 hypothetical protein -
FVP48_RS00045 () 6368..6529 + 162 WP_001128311.1 hypothetical protein -
FVP48_RS00050 () 6723..6884 + 162 WP_001434039.1 type I toxin-antitoxin system Hok family toxin -
FVP48_RS00055 () 7068..7745 + 678 WP_001401776.1 IS66 family transposase ISSfl3 Transposase
FVP48_RS00060 () 7742..8089 + 348 WP_000631709.1 IS66 family transposase ISSfl3 Transposase
FVP48_RS00065 () 8109..9710 + 1602 WP_032180886.1 IS66 family transposase ISSfl3 Transposase
FVP48_RS00070 () 9744..10094 + 351 Protein_13 transposase -
FVP48_RS00075 () 10094..10441 + 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
FVP48_RS00080 () 10461..12031 + 1571 Protein_15 IS66 family transposase ISCro1 Transposase
FVP48_RS00085 () 12075..12626 + 552 WP_000637611.1 hypothetical protein -
FVP48_RS00090 () 12644..12814 - 171 WP_000186151.1 hypothetical protein -
FVP48_RS00095 () 13007..13672 - 666 WP_000532148.1 P-loop NTPase -
FVP48_RS00100 () 14290..14820 + 531 Protein_19 IS4 family transposase IS186B Transposase
FVP48_RS00105 () 14877..15574 + 698 Protein_20 IS1 family transposase IS1G Transposase
FVP48_RS00110 () 16224..16472 + 249 WP_000513532.1 type II toxin-antitoxin system HicA family toxin Toxin Detail
FVP48_RS00115 () 16469..16816 + 348 WP_094171797.1 type II toxin-antitoxin system HicB family antitoxin Antitoxin Detail
FVP48_RS00120 () 16904..17086 - 183 WP_173002225.1 hypothetical protein -
FVP48_RS00125 () 17587..17886 + 300 WP_000466320.1 type II toxin-antitoxin system HicB family antitoxin -
FVP48_RS00130 () 18147..18473 - 327 WP_173002159.1 hypothetical protein -
FVP48_RS00135 () 19316..20164 + 849 WP_173002226.1 DUF4942 domain-containing protein -
FVP48_RS00140 () 20249..20584 - 336 WP_000157095.1 molybdopterin-guanine dinucleotide biosynthesis protein MobC -
FVP48_RS00145 () 20817..21149 + 333 WP_001291058.1 hypothetical protein -
FVP48_RS00150 () 21161..23872 + 2712 WP_173002160.1 Protein TraI Relaxase
FVP48_RS00155 () 24029..24424 + 396 WP_089611172.1 tolA family protein -
FVP48_RS00160 () 24507..24668 - 162 WP_173002154.1 hypothetical protein -
FVP48_RS00165 () 25216..27519 - 2304 WP_173002161.1 TraM recognition domain-containing protein -
FVP48_RS00170 () 27500..28624 - 1125 WP_173002162.1 DsbC family protein -
FVP48_RS00175 () 28621..29946 - 1326 WP_173002163.1 IncI1-type conjugal transfer protein TrbA -
FVP48_RS00180 () 30281..30532 + 252 WP_001081067.1 hypothetical protein -
FVP48_RS00185 () 30595..30771 - 177 WP_001054907.1 hypothetical protein -
FVP48_RS00190 () 30923..31390 - 468 WP_173002164.1 thermonuclease family protein -
FVP48_RS00195 () 31550..32173 + 624 WP_173002227.1 DNA-binding protein -
FVP48_RS00200 () 32371..32586 - 216 WP_000266543.1 hypothetical protein -
FVP48_RS00205 () 32590..32958 - 369 WP_001302696.1 hypothetical protein -
FVP48_RS00210 () 32970..33161 - 192 WP_000751583.1 hypothetical protein -
FVP48_RS00215 () 33258..33500 - 243 WP_021542659.1 hypothetical protein -
FVP48_RS00220 () 33842..33994 + 153 WP_001302699.1 Hok/Gef family protein -
FVP48_RS00225 () 34132..35718 - 1587 WP_173002165.1 RNA polymerase subunit sigma -
FVP48_RS00230 () 35992..36636 - 645 WP_173002166.1 plasmid IncI1-type surface exclusion protein ExcA -
FVP48_RS00235 () 36726..38891 - 2166 WP_173002167.1 DotA/TraY family protein -
FVP48_RS00240 () 38964..39533 - 570 WP_173002168.1 conjugal transfer protein TraX -
FVP48_RS00245 () 39530..40735 - 1206 WP_173002169.1 conjugal transfer protein TraW -
FVP48_RS00250 () 40693..41313 - 621 WP_173002170.1 conjugal transfer protein TraV -
FVP48_RS00255 () 41313..44357 - 3045 WP_115759490.1 ATP-binding protein -
FVP48_RS00260 () 44490..46082 - 1593 WP_151323654.1 IS66 family transposase ISEc23 Transposase
FVP48_RS00265 () 46113..46463 - 351 WP_000624718.1 IS66 family transposase ISEc47 Transposase
FVP48_RS00270 () 46460..46822 - 363 WP_173002155.1 IS66 family transposase ISEc23 Transposase
FVP48_RS00275 () 46857..47534 + 678 WP_001401776.1 IS66 family transposase ISSfl3 Transposase
FVP48_RS00280 () 47531..47878 + 348 WP_000631709.1 IS66 family transposase ISSfl3 Transposase
FVP48_RS00285 () 47898..49499 + 1602 WP_032180886.1 IS66 family transposase ISSfl3 Transposase
FVP48_RS00290 () 49530..49796 + 267 Protein_57 IS66 family insertion sequence element accessory protein TnpB -
FVP48_RS00295 () 49816..51386 + 1571 Protein_58 IS66 family transposase ISCro1 Transposase
FVP48_RS00300 () 51426..51701 + 276 WP_001707307.1 hypothetical protein -
- () 51677..51838 + 162 NuclAT_0 - -
- () 51677..51838 + 162 NuclAT_0 - -
- () 51677..51838 + 162 NuclAT_0 - -
- () 51677..51838 + 162 NuclAT_0 - -
FVP48_RS00305 () 51882..52040 + 159 WP_001302184.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
FVP48_RS00310 () 52518..52712 + 195 WP_173002228.1 hypothetical protein -
FVP48_RS00315 () 52939..53226 + 288 WP_173002171.1 hypothetical protein -
FVP48_RS00320 () 53345..54166 + 822 WP_173002229.1 DUF945 domain-containing protein -
FVP48_RS00325 () 54463..55020 - 558 Protein_64 hypothetical protein VF
FVP48_RS00330 () 55396..55779 + 384 WP_173002172.1 relaxosome protein TraM -
FVP48_RS00335 () 55973..56664 + 692 Protein_66 PAS domain-containing protein -
FVP48_RS00340 () 56752..56979 + 228 WP_001254388.1 conjugal transfer relaxosome protein TraY -
FVP48_RS00345 () 57013..57379 + 367 Protein_68 type IV conjugative transfer system pilin TraA -
FVP48_RS00350 () 57394..57705 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
FVP48_RS00355 () 57727..58293 + 567 WP_000399780.1 type IV conjugative transfer system protein TraE -
FVP48_RS00360 () 58280..59008 + 729 WP_173002173.1 type-F conjugative transfer system secretin TraK -
FVP48_RS00365 () 59008..60543 + 1536 Protein_72 F-type conjugal transfer pilus assembly protein TraB -
FVP48_RS00370 () 60610..60897 - 288 WP_001270417.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
FVP48_RS00375 () 60894..61145 - 252 WP_173002174.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
FVP48_RS00380 () 61318..61530 - 213 WP_032334873.1 hypothetical protein -
FVP48_RS00385 () 61905..63110 + 1206 WP_173002175.1 Plasmid partition protein A VF
FVP48_RS00390 () 63107..64069 + 963 WP_173002176.1 ParB/RepB/Spo0J family partition protein -
FVP48_RS00395 () 64227..65440 + 1214 WP_173002177.1 IS3 family transposase IS629 Transposase
FVP48_RS00400 () 65604..66818 - 1215 WP_173002178.1 acyltransferase -
FVP48_RS00405 () 66830..67459 - 630 WP_173002179.1 dispersin export ABC transporter ATP-binding protein AatC -
FVP48_RS00410 () 67452..68273 - 822 WP_173002180.1 hypothetical protein -
FVP48_RS00415 () 68170..69408 - 1239 WP_173002181.1 dispersin export ABC transporter outer membrane protein AatA -
FVP48_RS00420 () 69405..70535 - 1131 WP_173002230.1 dispersin export ABC transporter permease subunit AatP -
FVP48_RS00425 () 70793..71681 + 889 Protein_84 IS630 family transposase -
FVP48_RS00430 () 72182..73395 + 1214 WP_173002182.1 IS3 family transposase IS629 Transposase
FVP48_RS00435 () 73437..73846 - 410 Protein_86 IS3 family transposase ISKpn37 Transposase
FVP48_RS00445 () 74726..75419 - 694 Protein_87 IS1 family transposase IS1N Transposase
FVP48_RS00450 () 75698..76525 - 828 WP_173002183.1 AraC family transcriptional regulator -
FVP48_RS00455 () 76695..77388 - 694 Protein_89 IS1 family transposase IS1N Transposase
FVP48_RS00460 () 77446..78049 - 604 Protein_90 transposase -
FVP48_RS00465 () 78258..78608 - 351 WP_173002184.1 hypothetical protein VF
FVP48_RS00470 () 78834..78965 - 132 Protein_92 IS3 family transposase IS2 Transposase
FVP48_RS00475 () 79113..79304 - 192 Protein_93 IS3 family transposase IS2 Transposase
FVP48_RS00480 () 79301..79570 - 270 WP_062894119.1 hypothetical protein -
FVP48_RS00485 () 79714..81333 + 1620 WP_173002185.1 ISL3 family transposase ISEc38 Transposase
FVP48_RS00490 () 81383..81658 - 276 Protein_96 transposase -
FVP48_RS00495 () 82183..82797 + 615 WP_173002186.1 Major structural subunit of bundle-forming pilus VF
FVP48_RS00500 () 82860..83282 + 423 WP_173002187.1 hypothetical protein VF
FVP48_RS00505 () 83719..84963 + 1245 WP_173002231.1 Outer membrane lipoprotein BfpB VF
FVP48_RS00510 () 84966..86213 + 1248 WP_173002188.1 hypothetical protein VF
FVP48_RS00515 () 86206..86712 + 507 WP_173002189.1 hypothetical protein -
FVP48_RS00520 () 86715..88280 + 1566 WP_173002190.1 Toxin coregulated pilus biosynthesis protein T VF
FVP48_RS00525 () 88283..89347 + 1065 WP_173002191.1 Toxin coregulated pilus biosynthesis protein E VF
FVP48_RS00530 () 89356..90333 + 978 WP_173002192.1 Putative type II secretion system protein E VF
FVP48_RS00535 () 90317..91069 + 753 WP_173002193.1 Leader peptidase PppA VF
FVP48_RS00540 () 91057..91467 + 411 WP_173002194.1 hypothetical protein VF
FVP48_RS00545 () 91529..91981 + 453 WP_173002195.1 hypothetical protein -
FVP48_RS00550 () 91978..92625 + 648 WP_173002196.1 hypothetical protein -
FVP48_RS00555 () 92618..93118 + 501 WP_173002197.1 hypothetical protein -
FVP48_RS00560 () 93163..93549 + 387 WP_173002198.1 hypothetical protein -
FVP48_RS00565 () 93590..94183 + 594 WP_173002199.1 Major structural subunit of bundle-forming pilus VF
FVP48_RS00570 () 94278..94907 - 630 Protein_112 IS3 family transposase IS2 Transposase
FVP48_RS00575 () 95037..95291 - 255 Protein_113 IS66 family transposase IS679 Transposase
FVP48_RS00580 () 95257..95730 - 474 Protein_114 IS3 family transposase IS629 Transposase
FVP48_RS00585 () 95820..97328 - 1509 WP_001189111.1 group II intron reverse transcriptase/maturase -
FVP48_RS00590 () 98001..98740 - 740 Protein_116 IS3 family transposase IS629 Transposase
FVP48_RS00595 () 98886..99442 - 557 Protein_117 Tn3 family transposase TnBth3 Transposase
FVP48_RS00600 () 99460..99954 + 495 Protein_118 Tn3 family transposase ISEc63 Transposase
FVP48_RS00605 () 100231..100386 + 156 WP_164473669.1 hypothetical protein VF
FVP48_RS00610 () 100383..100971 + 589 Protein_120 hypothetical protein -
FVP48_RS00615 () 101858..102334 + 477 WP_032180158.1 hypothetical protein VF
FVP48_RS00620 () 102337..103815 + 1479 WP_173002200.1 hypothetical protein VF
FVP48_RS00625 () 103825..104349 + 525 WP_173002201.1 type VI secretion protein -
FVP48_RS00630 () 104360..104782 + 423 WP_000555555.1 hypothetical protein -
FVP48_RS00635 () 104775..106577 + 1803 WP_173002202.1 type VI secretion system baseplate subunit TssF -
FVP48_RS00640 () 106568..107500 + 933 WP_173002203.1 type VI secretion system baseplate subunit TssG -
FVP48_RS00645 () 107513..109555 + 2043 WP_173002204.1 type VI secretion system tip protein VgrG -
FVP48_RS00650 () 109566..110033 + 468 WP_173002205.1 type VI secretion protein -
FVP48_RS00655 () 110042..110341 + 300 WP_173002206.1 PAAR domain-containing protein -
FVP48_RS00660 () 110345..111421 + 1077 WP_173002207.1 hypothetical protein VF
FVP48_RS00665 () 111429..111980 + 552 WP_173002208.1 type VI secretion lipoprotein TssJ -
FVP48_RS00670 () 111999..113378 + 1380 WP_173002209.1 type VI secretion system baseplate subunit TssK -
FVP48_RS00675 () 113717..114334 + 618 WP_173002210.1 hypothetical protein VF
FVP48_RS00680 () 114341..117745 + 3405 WP_173002211.1 type VI secretion protein -
FVP48_RS00685 () 117749..120277 + 2529 WP_173002212.1 Protein ClpV1 VF
FVP48_RS00690 () 120934..122085 + 1152 WP_173002213.1 type VI secretion system ImpA family N-terminal domain-containing protein -
FVP48_RS00695 () 122252..122761 + 510 WP_173002214.1 kinesin -
FVP48_RS00700 () 122879..123142 + 264 WP_173002215.1 hypothetical protein -
FVP48_RS00705 () 123187..123333 + 147 Protein_139 transposase -
FVP48_RS00710 () 123327..123647 + 321 Protein_140 IS3 family transposase IS1203 Transposase
FVP48_RS00715 () 123661..124849 - 1189 Protein_141 IS3 family transposase IS2 Transposase
FVP48_RS00720 () 125213..125779 + 567 WP_170881605.1 hypothetical protein -
FVP48_RS00725 () 125926..126135 - 210 Protein_143 transposase domain-containing protein -
FVP48_RS00730 () 126228..126662 + 435 WP_001421699.1 IS66 family transposase ISEc47 Transposase
FVP48_RS00735 () 126659..127009 + 351 WP_000624688.1 IS66 family transposase ISEc47 Transposase
FVP48_RS00740 () 127040..128653 + 1614 WP_000080164.1 IS66 family transposase ISEc47 Transposase
FVP48_RS00745 () 128685..128858 - 174 Protein_147 IS66 family transposase ISEc8 Transposase
FVP48_RS00750 () 128908..129255 - 348 WP_032218831.1 IS66 family transposase ISEc8 Transposase
FVP48_RS00755 () 129252..129632 - 381 WP_001466366.1 IS66 family transposase ISEc8 Transposase
FVP48_RS00760 () 129676..129845 + 170 Protein_150 IS66 family transposase -
FVP48_RS00765 () 129929..130606 + 678 WP_001401776.1 IS66 family transposase ISSfl3 Transposase
FVP48_RS00770 () 130603..130950 + 348 WP_000631709.1 IS66 family transposase ISSfl3 Transposase
FVP48_RS00775 () 130970..132571 + 1602 WP_032180886.1 IS66 family transposase ISSfl3 Transposase
FVP48_RS00780 () 132593..133831 + 1239 Protein_154 IS66 family transposase ISEc22 Transposase
FVP48_RS00785 () 133990..134337 - 348 WP_000612626.1 IS66 family transposase ISKpn24 Transposase
FVP48_RS00790 () 134334..134675 - 342 WP_021533011.1 IS66 family transposase ISEc22 Transposase
FVP48_RS00795 () 134744..136138 - 1395 Protein_157 IS66 family transposase ISEc22 Transposase
FVP48_RS00800 () 136187..136534 - 348 WP_000612626.1 IS66 family transposase ISKpn24 Transposase
FVP48_RS00805 () 136837..136935 - 99 Protein_159 IS66 family transposase ISEc22 Transposase
FVP48_RS00810 () 137243..138456 + 1214 WP_173002216.1 IS3 family transposase IS629 Transposase
FVP48_RS00815 () 138769..142614 - 3846 WP_173002217.1 Serine protease SepA autotransporter VF
FVP48_RS00820 () 142801..142980 - 180 Protein_162 IS1 family transposase -
FVP48_RS00825 () 143484..143663 + 180 Protein_163 IS91 family transposase -
FVP48_RS00830 () 144015..145018 + 1004 Protein_164 IS110 family transposase IS4321 Transposase
FVP48_RS00835 () 145795..149616 + 3822 WP_173002218.1 Serine protease SepA autotransporter VF
FVP48_RS00840 () 149921..150151 + 231 Protein_166 IS256 family transposase IS1414 Transposase
FVP48_RS00845 () 150205..151418 + 1214 WP_173002219.1 IS3 family transposase IS629 Transposase
FVP48_RS00850 () 151462..152136 - 675 Protein_168 IS21 family transposase ISEc12 Transposase
FVP48_RS00855 () 152330..152905 - 576 Protein_169 IS66 family transposase ISCro1 Transposase
FVP48_RS00860 () 152925..153272 - 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
FVP48_RS00865 () 153272..153499 - 228 Protein_171 IS66 family transposase ISCro1 Transposase
FVP48_RS00870 () 153513..153719 + 207 Protein_172 IS3 family transposase ISEc48 Transposase
FVP48_RS00875 () 153776..154360 - 585 WP_000977522.1 histidine phosphatase family protein -
FVP48_RS00880 () 154624..155199 - 576 WP_173002220.1 Major structural subunit of bundle-forming pilus VF
FVP48_RS00885 () 155279..155614 - 336 Protein_175 IS21 family transposase IS21 Transposase
FVP48_RS00890 () 155614..155733 - 120 Protein_176 IS21 family transposase -
FVP48_RS00895 () 155851..157402 + 1552 Protein_177 IS66 family transposase ISCro1 Transposase
FVP48_RS00900 () 157474..158397 + 924 Protein_178 IS256 family transposase IS1414 Transposase
FVP48_RS00905 () 158535..158747 + 213 Protein_179 IS4 family transposase -
FVP48_RS00910 () 158911..159054 + 144 WP_173002221.1 DUF1281 domain-containing protein -
FVP48_RS00915 () 159051..159341 + 291 WP_173002232.1 DUF1281 domain-containing protein -
FVP48_RS00920 () 159475..159681 + 207 Protein_182 hypothetical protein -
FVP48_RS00925 () 159707..160920 + 1214 WP_173002222.1 IS3 family transposase IS629 Transposase
FVP48_RS00930 () 160986..161180 - 195 Protein_184 IS66 family transposase ISEc23 Transposase
FVP48_RS00935 () 161389..162066 + 678 WP_001401776.1 IS66 family transposase ISSfl3 Transposase
FVP48_RS00940 () 162063..162410 + 348 WP_000631709.1 IS66 family transposase ISSfl3 Transposase
FVP48_RS00945 () 162430..164031 + 1602 WP_032180886.1 IS66 family transposase ISSfl3 Transposase
FVP48_RS00950 () 164063..164263 + 201 Protein_188 ANR family transcriptional regulator -
FVP48_RS00955 () 164508..164966 + 459 Protein_189 thermonuclease family protein -
FVP48_RS00965 () 166328..166536 + 209 Protein_191 hemolysin expression modulator Hha -
FVP48_RS00970 () 166575..167165 + 591 WP_173002224.1 DUF2726 domain-containing protein -
FVP48_RS00975 () 167405..167665 + 261 WP_000078108.1 replication regulatory protein RepA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance