MGE detailed information

MGE type: Conjugative plasmid        MGE length: 186249 bp
Accession: NZ_CP042513        Location: 1..186249         Organism: Serratia marcescens strain E28       Replicon: plasmid pE28_001


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FR888_RS26285 () 1..1011 + 1011 WP_000200070.1 RepB family plasmid replication initiator protein -
FR888_RS26290 () 1709..2449 - 741 WP_001515717.1 tyrosine-type recombinase/integrase -
FR888_RS26295 () 3080..3388 - 309 Protein_2 IS3 family transposase ISLad1 Transposase
FR888_RS26300 () 3405..4481 - 1077 WP_000227969.1 IS110 family transposase ISEc21 Transposase
FR888_RS26310 () 4763..5622 - 860 Protein_4 IS3 family transposase -
FR888_RS26315 () 5976..6224 + 249 WP_004187025.1 plasmid stabilization protein -
FR888_RS26320 () 6214..6402 + 189 Protein_6 type II toxin-antitoxin system RelE/ParE family toxin -
FR888_RS26325 () 6458..6547 + 90 Protein_7 IS1 family transposase -
FR888_RS28670 () 6516..6656 + 141 WP_192802328.1 hypothetical protein -
FR888_RS26330 () 6695..7675 - 981 WP_014386491.1 IS5 family transposase ISKpn26 Transposase
FR888_RS28675 () 8071..8184 + 114 WP_014343462.1 hypothetical protein -
FR888_RS26335 () 8313..8570 + 258 WP_009310077.1 hypothetical protein -
FR888_RS26340 () 8628..9407 - 780 WP_023287113.1 site-specific integrase -
FR888_RS26345 () 9605..10621 - 1017 WP_009309921.1 hypothetical protein -
FR888_RS26350 () 10655..10990 - 336 WP_009309920.1 hypothetical protein -
FR888_RS26355 () 11040..11351 - 312 WP_009309919.1 hypothetical protein -
FR888_RS26360 () 11409..11714 - 306 WP_004197633.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
FR888_RS26365 () 11716..11934 - 219 WP_006788213.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
FR888_RS26375 () 12104..12565 - 462 WP_192802327.1 hypothetical protein -
FR888_RS26380 () 12522..12752 + 231 WP_001261282.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
FR888_RS26385 () 12749..13165 + 417 WP_001044770.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
FR888_RS26390 () 13239..14801 + 1563 WP_004206609.1 AAA family ATPase -
FR888_RS26395 () 14786..15808 + 1023 WP_151523148.1 DNA helicase UvrD -
FR888_RS26400 () 16346..17260 + 915 WP_031592169.1 HNH endonuclease -
FR888_RS26405 () 17446..17796 - 351 WP_004187110.1 DUF305 domain-containing protein -
FR888_RS26410 () 17944..18375 - 432 WP_004187113.1 silver-binding protein SilE -
FR888_RS26415 () 18626..20101 - 1476 WP_003032875.1 copper/silver sensor histidine kinase SilS -
FR888_RS26420 () 20094..20774 - 681 WP_001572351.1 Regulator of RpoS VF
FR888_RS26425 () 20964..22349 + 1386 WP_000475512.1 hypothetical protein VF
FR888_RS26430 () 22378..22740 + 363 WP_004213578.1 cation efflux system protein CusF -
FR888_RS26435 () 22854..24146 + 1293 WP_048270279.1 Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB -
FR888_RS26440 () 24157..27303 + 3147 WP_048270278.1 Cu(+)/Ag(+) efflux RND transporter permease subunit SilA -
FR888_RS26445 () 27390..27830 + 441 WP_048270277.1 hypothetical protein -
FR888_RS26450 () 27957..30404 + 2448 WP_048270276.1 Ag(+)-translocating P-type ATPase SilP -
FR888_RS26455 () 30445..30642 + 198 WP_000843497.1 DUF2933 domain-containing protein -
FR888_RS26460 () 30676..31413 - 738 WP_000287501.1 hypothetical protein VF
FR888_RS26465 () 31702..32151 - 450 WP_001023257.1 copper resistance protein -
FR888_RS26470 () 32385..34202 + 1818 WP_000925242.1 multicopper oxidase PcoA -
FR888_RS26475 () 34208..35098 + 891 WP_001378118.1 copper resistance outer membrane transporter PcoB -
FR888_RS26480 () 35138..35518 + 381 WP_000025662.1 copper resistance system metallochaperone PcoC -
FR888_RS26485 () 35523..36452 + 930 WP_004213583.1 copper resistance inner membrane protein PcoD -
FR888_RS26490 () 36507..37187 + 681 WP_001188930.1 Regulator of RpoS VF
FR888_RS26495 () 37184..38584 + 1401 WP_004152084.1 copper resistance membrane spanning protein PcoS -
FR888_RS26500 () 38800..39234 + 435 WP_004118347.1 hypothetical protein -
FR888_RS26510 () 39613..39711 - 99 WP_004118688.1 type II toxin-antitoxin system RelE/ParE family toxin -
FR888_RS26515 () 39698..39877 - 180 WP_004118349.1 type II toxin-antitoxin system ParD family antitoxin -
FR888_RS26520 () 40191..40439 + 249 WP_032415726.1 hypothetical protein -
FR888_RS26525 () 40436..41668 + 1233 WP_004200905.1 hypothetical protein -
FR888_RS26530 () 41802..42293 + 492 WP_004200903.1 hypothetical protein -
FR888_RS28680 () 42405..42605 - 201 WP_023280894.1 hypothetical protein -
FR888_RS26540 () 43518..43826 - 309 WP_017896554.1 hypothetical protein -
FR888_RS26555 () 45545..46093 + 549 WP_001567366.1 thioredoxin fold domain-containing protein -
FR888_RS26560 () 46140..46574 + 435 WP_001567367.1 cell envelope integrity protein TolA -
FR888_RS26565 () 46819..47085 + 267 WP_003026799.1 DUF1778 domain-containing protein Antitoxin Detail
FR888_RS26570 () 47073..47555 + 483 WP_003026803.1 GNAT family N-acetyltransferase Toxin Detail
FR888_RS26575 () 47756..49159 + 1404 WP_001567368.1 ISNCY family transposase ISKpn21 Transposase
FR888_RS26580 () 49188..49820 - 633 WP_001567369.1 hypothetical protein -
FR888_RS26585 () 50046..51392 + 1347 WP_077253535.1 ISNCY family transposase ISLad2 Transposase
FR888_RS26590 () 51441..51836 + 396 WP_004143398.1 ISNCY family transposase ISKpn21 Transposase
FR888_RS26595 () 52025..53422 + 1398 WP_009653207.1 ISNCY family transposase ISKpn21 Transposase
FR888_RS26600 () 53443..53634 + 192 Protein_61 hypothetical protein -
FR888_RS26605 () 53662..53940 - 279 WP_004197671.1 hypothetical protein -
FR888_RS26610 () 54275..54841 - 567 WP_004197678.1 LuxR family transcriptional regulator -
FR888_RS26615 () 54966..56609 - 1644 WP_004197675.1 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) -
FR888_RS26620 () 56723..59170 - 2448 WP_023157975.1 glycogen phosphorylase -
FR888_RS26625 () 59189..60622 - 1434 WP_009653212.1 glycogen synthase GlgA -
FR888_RS26630 () 60778..61983 + 1206 WP_151523149.1 ISL3 family transposase ISAba43 Transposase
FR888_RS26635 () 62029..63312 - 1284 WP_151523150.1 glucose-1-phosphate adenylyltransferase -
FR888_RS26640 () 63442..65634 - 2193 WP_004099052.1 1,4-alpha-glucan branching enzyme -
FR888_RS26650 () 66007..66975 + 969 WP_013815099.1 IS5 family transposase IS903B Transposase
FR888_RS26655 () 67024..67584 - 561 Protein_71 IS110 family transposase IS5075 Transposase
FR888_RS26660 () 67663..68220 - 558 WP_003100847.1 Tn3 family transposase TnpR_ISPa38 Transposase
FR888_RS26665 () 68214..68585 - 372 WP_003100853.1 hypothetical protein -
FR888_RS26670 () 68582..69082 - 501 WP_003100856.1 hypothetical protein -
FR888_RS26675 () 69079..69405 - 327 WP_003100858.1 hypothetical protein -
FR888_RS26680 () 69660..70016 - 357 WP_003465043.1 cupin domain-containing protein -
FR888_RS26685 () 70006..70407 - 402 WP_001293886.1 DUF86 domain-containing protein -
FR888_RS26690 () 70404..70694 - 291 WP_001247892.1 nucleotidyltransferase -
FR888_RS26695 () 70853..73737 + 2885 Protein_79 Tn3 family transposase TnpA_ISPa38 Transposase
FR888_RS26700 () 73816..74820 + 1005 WP_000427614.1 IS110 family transposase IS5075 Transposase
FR888_RS26705 () 75002..75496 - 495 WP_104877020.1 NAD(P)H-dependent oxidoreductase -
FR888_RS26710 () 75493..75825 - 333 WP_001549890.1 metalloregulator ArsR/SmtB family transcription factor -
FR888_RS26715 () 76197..76328 + 132 Protein_83 IS6 family transposase -
FR888_RS26725 () 76673..77677 - 1005 WP_000427614.1 IS110 family transposase IS5075 Transposase
FR888_RS26730 () 77777..78211 - 435 WP_000429838.1 Hg(II)-responsive transcriptional regulator -
FR888_RS26735 () 78283..78633 + 351 WP_001294667.1 mercuric ion transporter MerT -
FR888_RS26740 () 78649..78924 + 276 WP_000735441.1 mercury resistance system periplasmic binding protein MerP -
FR888_RS26745 () 78927..79172 + 246 WP_000654684.1 mercury resistance system transport protein MerF -
FR888_RS26750 () 79169..80815 + 1647 WP_000136268.1 mercury(II) reductase -
FR888_RS26755 () 80832..81197 + 366 WP_003465059.1 mercury resistance co-regulator MerD -
FR888_RS26760 () 81194..81430 + 237 WP_001087809.1 broad-spectrum mercury transporter MerE -
FR888_RS26765 () 81483..82097 - 615 WP_000904941.1 Tn3 family transposase TnpR_ISMex22 Transposase
FR888_RS26770 () 82229..82702 - 474 WP_013213991.1 GNAT family N-acetyltransferase -
FR888_RS26780 () 83122..83634 - 513 Protein_94 ISL3 family transposase ISEc38 Transposase
FR888_RS28685 () 83638..83970 - 333 WP_013213994.1 hypothetical protein -
FR888_RS26785 () 84335..85315 + 981 WP_000019473.1 IS5 family transposase ISKpn26 Transposase
FR888_RS26790 () 85556..86467 - 912 WP_013213995.1 hypothetical protein -
FR888_RS26795 () 86519..88461 - 1943 Protein_98 hypothetical protein -
FR888_RS26800 () 88465..89358 - 894 WP_019706022.1 hypothetical protein -
FR888_RS26805 () 89366..90529 - 1164 WP_157845837.1 N-6 DNA methylase -
FR888_RS26815 () 91925..92782 - 858 WP_023317514.1 incFII family plasmid replication initiator RepA -
FR888_RS26820 () 92775..92852 - 78 WP_004171457.1 RepA leader peptide Tap -
FR888_RS26825 () 93069..93347 - 279 WP_004099069.1 replication regulatory protein RepA -
FR888_RS26830 () 93668..94219 - 552 WP_013213996.1 Cardiolipin synthase B VF
FR888_RS26835 () 94505..94766 - 262 Protein_105 bacteriocin immunity protein -
FR888_RS26840 () 94768..96422 - 1655 Protein_106 S-type pyocin domain-containing protein -
FR888_RS26850 () 96780..97325 + 546 WP_023317517.1 hypothetical protein -
FR888_RS26855 () 97553..97900 - 348 WP_023317518.1 hypothetical protein -
FR888_RS26860 () 97920..98516 - 597 WP_023317519.1 fertility inhibition protein FinO -
FR888_RS26865 () 98588..99313 - 726 WP_023317520.1 type-F conjugative transfer system pilin acetylase TraX -
FR888_RS26870 () 99403..104661 - 5259 WP_151523151.1 ATP-dependent RecD-like DNA helicase Relaxase
FR888_RS26875 () 104661..106970 - 2310 Protein_112 type IV conjugative transfer system coupling protein TraD -
FR888_RS28690 () 107097..107786 - 690 WP_013023831.1 hypothetical protein -
FR888_RS26885 () 107979..108596 - 618 WP_015065642.1 hypothetical protein -
FR888_RS26890 () 108562..108708 - 147 WP_004197893.1 hypothetical protein -
FR888_RS26895 () 108897..109427 - 531 WP_074187241.1 conjugal transfer protein TraS -
FR888_RS26900 () 109430..112279 - 2850 WP_042922342.1 conjugal transfer mating pair stabilization protein TraG -
FR888_RS26905 () 112279..113658 - 1380 WP_074187239.1 F-type conjugal transfer protein TraH -
FR888_RS26910 () 113636..114079 - 444 WP_015065638.1 F-type conjugal transfer protein TrbF -
FR888_RS26915 () 114124..114681 - 558 WP_004152678.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
FR888_RS26920 () 114653..114892 - 240 WP_004144400.1 type-F conjugative transfer system pilin chaperone TraQ -
FR888_RS26925 () 114903..115655 - 753 WP_042922347.1 type-F conjugative transfer system pilin assembly protein TraF -
FR888_RS26930 () 115676..116002 - 327 WP_016529362.1 hypothetical protein -
FR888_RS26940 () 116230..116466 - 237 WP_042922352.1 conjugal transfer protein TrbE -
FR888_RS26945 () 116498..118453 - 1956 WP_015065636.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
FR888_RS26950 () 118512..119150 - 639 WP_015065635.1 type-F conjugative transfer system pilin assembly protein TrbC -
FR888_RS26955 () 119163..120152 - 990 WP_009309872.1 conjugal transfer pilus assembly protein TraU -
FR888_RS26960 () 120149..120538 - 390 WP_042922355.1 hypothetical protein -
FR888_RS26965 () 120580..121206 - 627 WP_009309871.1 type-F conjugative transfer system protein TraW -
FR888_RS26970 () 121206..121595 - 390 WP_004152591.1 type-F conjugative transfer system protein TrbI -
FR888_RS26975 () 121595..124234 - 2640 WP_042922359.1 type IV secretion system protein TraC -
FR888_RS26980 () 124306..124704 - 399 WP_023179972.1 hypothetical protein -
FR888_RS26995 () 125082..125486 - 405 WP_004197817.1 hypothetical protein -
FR888_RS27000 () 125553..125864 - 312 WP_004195240.1 hypothetical protein -
FR888_RS27005 () 125865..126083 - 219 WP_004195235.1 hypothetical protein -
FR888_RS27010 () 126189..126599 - 411 WP_004152499.1 hypothetical protein -
FR888_RS27015 () 126731..127315 - 585 WP_032441881.1 type IV conjugative transfer system lipoprotein TraV -
FR888_RS27020 () 127429..128853 - 1425 WP_042922367.1 conjugal transfer protein TraB -
FR888_RS27025 () 128853..129593 - 741 WP_015065528.1 type-F conjugative transfer system secretin TraK -
FR888_RS27030 () 129580..130146 - 567 WP_004144423.1 type IV conjugative transfer system protein TraE -
FR888_RS27035 () 130166..130471 - 306 WP_004144424.1 type IV conjugative transfer system protein TraL -
FR888_RS27040 () 130485..130853 - 369 WP_004194426.1 type IV conjugative transfer system pilin TraA -
FR888_RS27045 () 130907..131278 - 372 WP_004208838.1 TraY domain-containing protein -
FR888_RS27050 () 131362..132057 - 696 WP_072271345.1 transcriptional regulator TraJ family protein -
FR888_RS27055 () 132264..132656 - 393 WP_032441878.1 relaxosome protein TraM -
FR888_RS27060 () 133091..133576 + 486 WP_001568108.1 hypothetical protein VF
FR888_RS27065 () 133609..133938 - 330 WP_192802326.1 hypothetical protein -
FR888_RS27070 () 133971..134792 - 822 WP_023316395.1 DUF945 domain-containing protein -
FR888_RS27080 () 135620..136033 - 414 WP_021312979.1 helix-turn-helix domain-containing protein -
FR888_RS27085 () 136034..136312 - 279 WP_004152721.1 helix-turn-helix domain-containing protein -
FR888_RS27090 () 136302..136622 - 321 WP_004152720.1 type II toxin-antitoxin system RelE/ParE family toxin -
FR888_RS27095 () 136703..136927 - 225 WP_014343499.1 hypothetical protein -
FR888_RS27100 () 136938..137150 - 213 WP_019706020.1 hypothetical protein -
FR888_RS27105 () 137211..137567 - 357 WP_019706019.1 hypothetical protein -
FR888_RS27115 () 138408..138725 - 318 WP_015065519.1 hypothetical protein -
FR888_RS27120 () 138740..139090 - 351 WP_032425551.1 hypothetical protein -
FR888_RS27125 () 139087..139359 - 273 WP_032425552.1 hypothetical protein -
FR888_RS27135 () 140099..141211 + 1113 WP_001300563.1 IS4 family transposase IS421 Transposase
FR888_RS27140 () 141406..141564 - 159 WP_014343509.1 type I toxin-antitoxin system Hok family toxin -
FR888_RS27145 () 141636..142670 + 1035 Protein_160 IS481 family transposase ISKpn28 Transposase
FR888_RS27150 () 142737..143024 - 288 WP_000323025.1 type II toxin-antitoxin system mRNA interferase RelE Toxin Detail
FR888_RS27155 () 143024..143263 - 240 WP_004196370.1 type II toxin-antitoxin system antitoxin RelB Antitoxin Detail
FR888_RS27160 () 143514..143879 + 366 WP_009651956.1 hypothetical protein -
FR888_RS27165 () 143923..144660 + 738 WP_008460272.1 HupE/UreJ family protein -
FR888_RS27170 () 144674..145363 + 690 WP_004196322.1 hypothetical protein -
FR888_RS27175 () 145394..146770 - 1377 Protein_166 chromate efflux transporter -
FR888_RS27180 () 146727..147704 - 978 WP_004196334.1 chromate resistance protein -
FR888_RS27185 () 147734..147926 + 193 Protein_168 MFS transporter -
FR888_RS27190 () 148051..148422 + 372 WP_004196359.1 hypothetical protein -
FR888_RS27195 () 148485..149405 + 921 WP_004196315.1 hypothetical protein -
FR888_RS27200 () 149459..150217 + 759 WP_004196325.1 hypothetical protein -
FR888_RS27205 () 150451..151749 + 1299 WP_004196314.1 nickel resistance membrane nickel efflux protein NirA -
FR888_RS27210 () 151855..152124 + 270 WP_004196355.1 nickel-sensing transcriptional repressor NcrB -
FR888_RS27215 () 152137..153267 + 1131 WP_004196366.1 Ni(II)/Co(II) efflux transporter permease subunit NcrC -
FR888_RS27220 () 153429..153851 + 423 WP_032072095.1 nickel resistance OB fold protein NcrY -
FR888_RS27225 () 154107..155447 - 1341 WP_004196353.1 ISNCY family transposase ISCARN112 Transposase
FR888_RS27230 () 155596..156669 + 1074 WP_055317801.1 IS481 family transposase ISKpn28 Transposase
FR888_RS27235 () 157001..159283 - 2283 WP_162837909.1 S8 family peptidase -
FR888_RS27240 () 159489..160529 - 1041 WP_009310020.1 ATP-binding protein -
FR888_RS27250 () 162275..162649 - 375 WP_023280872.1 hypothetical protein -
FR888_RS27260 () 162796..163764 + 969 WP_162492046.1 IS5 family transposase IS903B Transposase
FR888_RS27265 () 163820..165328 - 1509 Protein_183 ParB/RepB/Spo0J family partition protein -
FR888_RS27270 () 165398..165646 - 249 WP_001568055.1 DUF905 domain-containing protein -
FR888_RS27275 () 165695..166237 - 543 WP_110133674.1 single-stranded DNA-binding protein -
FR888_RS27290 () 167072..167635 - 564 WP_004182054.1 methyltransferase -
FR888_RS27295 () 167683..169038 - 1356 WP_151523154.1 DUF3560 domain-containing protein -
FR888_RS27300 () 169090..169320 - 231 WP_001568051.1 hypothetical protein -
FR888_RS27305 () 169412..169639 - 228 WP_001568050.1 hypothetical protein -
FR888_RS27325 () 170319..170639 - 321 WP_001568049.1 hypothetical protein -
FR888_RS27330 () 170674..170928 - 255 WP_011977779.1 DNA polymerase III subunit theta -
FR888_RS27335 () 171116..171307 - 192 WP_001568047.1 hypothetical protein -
FR888_RS27340 () 171350..171856 - 507 WP_042015157.1 antirestriction protein ArdA -
FR888_RS27345 () 171899..172327 - 429 WP_001568045.1 antirestriction protein -
FR888_RS27350 () 173008..173775 - 768 WP_022631157.1 hypothetical protein -
FR888_RS27355 () 173829..174248 - 420 WP_001568043.1 DUF1380 domain-containing protein -
FR888_RS27360 () 174258..174479 - 222 WP_001568042.1 hypothetical protein -
FR888_RS27365 () 174479..175180 - 702 WP_001568041.1 DNA methylase -
FR888_RS27375 () 175617..175847 - 231 WP_001568040.1 hypothetical protein -
FR888_RS27380 () 175910..176581 - 672 WP_042015161.1 plasmid partitioning/stability family protein -
FR888_RS27385 () 176584..177555 - 972 WP_032425559.1 StbA family protein -
FR888_RS27390 () 177804..179291 - 1488 WP_162898809.1 group II intron reverse transcriptase/maturase -
FR888_RS27400 () 179694..180119 + 426 WP_009309980.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
FR888_RS27405 () 180119..181390 + 1272 WP_004206782.1 Y-family DNA polymerase -
FR888_RS27410 () 181469..181720 + 252 WP_004206783.1 plasmid stabilization protein -
FR888_RS27415 () 181774..182079 + 306 WP_009309981.1 hypothetical protein -
FR888_RS27430 () 183362..184333 - 972 WP_009309982.1 ParB/RepB/Spo0J family plasmid partition protein -
FR888_RS27435 () 184333..185499 - 1167 WP_000523812.1 hypothetical protein VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance