MGE detailed information

MGE type: Conjugative plasmid        MGE length: 161372 bp
Accession: NZ_CP041338        Location: 1..161372         Organism: Escherichia coli strain CCUG 73778       Replicon: plasmid pSUH-1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FMA85_RS24620 () 645..949 - 305 Protein_1 hypothetical protein -
FMA85_RS24625 () 953..1855 - 903 WP_001348615.1 DUF1281 domain-containing protein -
FMA85_RS24630 () 2722..3693 - 972 WP_000817036.1 ParB/RepB/Spo0J family plasmid partition protein -
FMA85_RS24635 () 3693..4859 - 1167 WP_000772446.1 Sporulation initiation inhibitor protein Soj VF
FMA85_RS24640 () 5447..6202 - 756 WP_000852146.1 replication initiation protein RepE -
FMA85_RS24645 () 6976..7782 - 807 WP_000016982.1 site-specific integrase -
FMA85_RS24650 () 7783..8088 - 306 WP_001159868.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
FMA85_RS24655 () 8090..8308 - 219 WP_000813634.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
FMA85_RS24660 () 8942..9139 + 198 WP_000215657.1 hypothetical protein -
FMA85_RS24665 () 9136..9420 - 285 WP_000642771.1 hypothetical protein -
FMA85_RS24670 () 9440..10573 - 1134 WP_000545983.1 DUF3800 domain-containing protein -
FMA85_RS24675 () 10836..13955 - 3120 WP_001553851.1 hypothetical protein -
FMA85_RS24680 () 14262..14492 + 231 WP_001261287.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
FMA85_RS24685 () 14489..14905 + 417 WP_001044768.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
FMA85_RS24690 () 15067..17205 - 2139 WP_000350635.1 AAA family ATPase -
FMA85_RS24695 () 17670..18665 + 996 WP_000246636.1 hypothetical protein -
FMA85_RS24700 () 18669..19601 + 933 WP_000991832.1 hypothetical protein -
FMA85_RS24705 () 19738..20435 - 698 Protein_18 IS1 family transposase IS1G Transposase
FMA85_RS24710 () 20649..23765 - 3117 WP_001553854.1 HsdR family type I site-specific deoxyribonuclease -
FMA85_RS24715 () 23887..25170 - 1284 WP_001553855.1 restriction endonuclease subunit S -
FMA85_RS24720 () 25167..26723 - 1557 WP_001553856.1 type I restriction-modification system subunit M -
FMA85_RS24725 () 26906..27127 + 222 WP_001190712.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
FMA85_RS24730 () 27127..27507 + 381 WP_001216034.1 type II toxin-antitoxin system death-on-curing family toxin Toxin Detail
FMA85_RS24735 () 27512..27691 + 180 WP_001513661.1 hypothetical protein -
FMA85_RS24740 () 27719..28078 + 360 WP_001513660.1 hypothetical protein -
FMA85_RS24745 () 28002..28415 + 414 Protein_26 IS3 family transposase ISLad1 Transposase
FMA85_RS24750 () 28365..28682 - 318 WP_001513659.1 hypothetical protein -
FMA85_RS24755 () 28910..29926 - 1017 WP_012372828.1 IS5 family transposase IS5D Transposase
FMA85_RS24760 () 30134..31537 + 1404 WP_001373486.1 S-methylmethionine permease -
FMA85_RS24765 () 31524..32456 + 933 WP_000081352.1 homocysteine S-methyltransferase -
FMA85_RS24770 () 32565..32894 - 330 Protein_31 TOBE domain-containing protein -
FMA85_RS24775 () 32910..33607 - 698 Protein_32 IS1 family transposase IS1R Transposase
FMA85_RS26300 () 34094..34489 - 396 WP_175188304.1 hypothetical protein -
FMA85_RS24785 () 35610..36587 + 978 WP_000361612.1 RepB family plasmid replication initiator protein -
FMA85_RS24790 () 36872..37612 - 741 WP_001066942.1 tyrosine-type recombinase/integrase -
FMA85_RS24795 () 37733..37915 - 183 WP_042065278.1 hypothetical protein -
FMA85_RS24800 () 38258..38565 - 308 Protein_37 type II toxin-antitoxin system ParD family antitoxin -
FMA85_RS24805 () 39058..40227 + 1170 WP_001072355.1 hypothetical protein -
FMA85_RS24810 () 40260..40388 + 129 Protein_39 IS481 family transposase -
FMA85_RS24815 () 40423..40716 - 294 WP_001105060.1 hypothetical protein -
FMA85_RS24820 () 40822..41097 - 276 WP_000421272.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
FMA85_RS24825 () 41097..41381 - 285 WP_001387467.1 ribbon-helix-helix domain-containing protein Antitoxin Detail
FMA85_RS24830 () 41986..42738 + 753 WP_000562172.1 IclR family transcriptional regulator -
FMA85_RS24835 () 42784..43749 - 966 WP_001022265.1 2-keto-3-deoxygluconate transporter -
FMA85_RS24840 () 43782..44162 - 381 WP_000710783.1 Rid family detoxifying hydrolase -
FMA85_RS24845 () 44187..45077 - 891 WP_001077068.1 dihydrodipicolinate synthase family protein -
FMA85_RS24850 () 45478..45918 + 441 Protein_47 zinc-binding dehydrogenase -
FMA85_RS24855 () 46049..46927 + 879 WP_000338039.1 sugar ABC transporter permease -
FMA85_RS24860 () 46917..47804 + 888 WP_001271561.1 carbohydrate ABC transporter permease -
FMA85_RS24865 () 47815..48639 + 825 WP_000922702.1 phosphodiesterase -
FMA85_RS24870 () 48645..49718 + 1074 WP_000950177.1 sn-glycerol-3-phosphate import ATP-binding protein UgpC VF
FMA85_RS24875 () 49711..51021 + 1311 WP_000476108.1 ABC transporter substrate-binding protein -
FMA85_RS24880 () 51080..51388 - 309 Protein_53 IS4 family transposase ISEc13 Transposase
FMA85_RS24885 () 51465..51698 - 234 Protein_54 Tn3 family transposase ISPsy39 Transposase
FMA85_RS24890 () 51720..52916 - 1197 Protein_55 IS3 family transposase -
FMA85_RS24895 () 52941..53645 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
FMA85_RS24900 () 53703..54233 - 531 Protein_57 histidine-type phosphatase -
FMA85_RS24905 () 54355..54840 - 486 WP_000874189.1 hypothetical protein -
FMA85_RS24910 () 54865..55350 - 486 WP_001267177.1 TlpA family protein disulfide reductase -
FMA85_RS24915 () 55337..56032 - 696 WP_000117262.1 Lipoprotein-releasing system ATP-binding protein LolD VF
FMA85_RS24920 () 56037..57167 - 1131 WP_000729220.1 ABC transporter permease -
FMA85_RS24925 () 57157..58440 - 1284 WP_000964653.1 ABC transporter permease -
FMA85_RS24930 () 58443..59822 - 1380 WP_000119836.1 DUF2318 domain-containing protein -
FMA85_RS24935 () 59926..60453 - 528 WP_000178050.1 iron transporter -
FMA85_RS24940 () 60494..62380 - 1887 WP_000118029.1 FTR1 family iron permease -
FMA85_RS24945 () 62727..63542 - 816 WP_012372823.1 Na(+)-translocating NADH-quinone reductase subunit C -
FMA85_RS24950 () 63768..64472 + 705 WP_001067834.1 IS6 family transposase IS26 Transposase
FMA85_RS24955 () 64594..65499 + 906 WP_000219391.1 hypothetical protein ARG
FMA85_RS24960 () 65496..66734 + 1239 WP_000004159.1 MFS transporter -
FMA85_RS24965 () 66734..67318 + 585 WP_001137892.1 TetR family transcriptional regulator -
FMA85_RS24970 () 67811..68575 - 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
FMA85_RS24975 () 68802..69107 - 306 WP_000130000.1 hypothetical protein Relaxase
FMA85_RS24980 () 69118..70323 - 1206 WP_000184001.1 chromate efflux transporter -
FMA85_RS24985 () 70479..70682 - 204 WP_000376616.1 hypothetical protein -
FMA85_RS24990 () 70810..71649 - 840 WP_000259031.1 Dihydropteroate synthase ARG
FMA85_RS24995 () 71643..71990 - 348 WP_000679427.1 Multidrug transporter EmrE ARG
FMA85_RS25000 () 72196..72984 - 789 WP_000503573.1 Streptomycin 3''-adenylyltransferase ARG
FMA85_RS25005 () 73115..73588 - 474 WP_001389366.1 trimethoprim-resistant dihydrofolate reductase DfrA17 -
FMA85_RS25010 () 73746..74759 + 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
FMA85_RS25015 () 74962..75312 + 351 WP_000454193.1 DUF3330 domain-containing protein -
FMA85_RS26305 () 75438..75617 + 180 Protein_81 Tn3 family transposase TnpR_TnAs3 Transposase
FMA85_RS25025 () 75658..76362 - 705 WP_001067834.1 IS6 family transposase IS26 Transposase
FMA85_RS25030 () 76427..77677 - 1251 Protein_83 transposase -
FMA85_RS25035 () 77752..78420 - 669 WP_001300294.1 putative signaling protein VF
FMA85_RS25040 () 78456..78692 - 237 WP_000993386.1 broad-spectrum mercury transporter MerE -
FMA85_RS25045 () 78689..79051 - 363 WP_001277456.1 mercury resistance co-regulator MerD -
FMA85_RS25050 () 79069..79566 - 498 Protein_87 mercuric reductase -
FMA85_RS25055 () 79727..80587 - 861 WP_000027057.1 Beta-lactamase TEM ARG
FMA85_RS25060 () 80770..81327 - 558 WP_001235713.1 Tn3 family transposase TnpR_Tn3 Transposase
FMA85_RS25065 () 81491..84496 + 3006 WP_001143760.1 Tn3 family transposase TnpA_Tn3 Transposase
FMA85_RS25070 () 84530..84619 - 90 Protein_91 mercuric transport protein -
FMA85_RS25075 () 84691..85125 + 435 WP_000429836.1 IS607 family transposase ISChh1 Transposase
FMA85_RS25080 () 85521..85922 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
FMA85_RS25085 () 85855..86112 - 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
FMA85_RS25090 () 86205..86858 - 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
FMA85_RS25095 () 87797..88654 - 858 WP_000130948.1 incFII family plasmid replication initiator RepA -
FMA85_RS25100 () 88647..88721 - 75 WP_001365705.1 RepA leader peptide Tap -
FMA85_RS25105 () 88957..89214 - 258 WP_000083821.1 replication regulatory protein RepA -
FMA85_RS25110 () 89619..90641 + 1023 WP_000156883.1 IS110 family transposase ISSm1 Transposase
FMA85_RS25115 () 91113..91466 + 354 WP_000005489.1 hypothetical protein -
FMA85_RS25120 () 91879..92457 - 579 WP_032147503.1 DUF2726 domain-containing protein -
FMA85_RS25125 () 92490..93183 + 694 Protein_102 IS1 family transposase IS1A Transposase
FMA85_RS25130 () 93292..93654 + 363 WP_059330006.1 IS66 family transposase ISEc23 Transposase
FMA85_RS25135 () 93651..94001 + 351 WP_000624725.1 IS66 family transposase ISEc47 Transposase
FMA85_RS25140 () 94032..94253 + 222 WP_000080217.1 IS66 family transposase ISEc47 Transposase
FMA85_RS25145 () 94205..94546 + 342 Protein_106 transposase -
FMA85_RS25150 () 94610..95089 - 480 WP_001496175.1 ArgR family transcriptional regulator -
FMA85_RS25155 () 95170..96573 - 1404 WP_000514417.1 YfcC family protein -
FMA85_RS25160 () 96621..97625 - 1005 WP_000154544.1 Ornithine carbamoyltransferase VF
FMA85_RS25165 () 97710..98621 - 912 WP_000440183.1 carbamate kinase -
FMA85_RS25170 () 98632..99852 - 1221 WP_000410951.1 arginine deiminase -
FMA85_RS25175 () 100745..101227 + 483 Protein_112 VENN motif pre-toxin domain-containing protein -
FMA85_RS25180 () 101173..101619 - 447 Protein_113 incFII family plasmid replication initiator RepA -
FMA85_RS25185 () 101612..101686 - 75 WP_001365705.1 RepA leader peptide Tap -
FMA85_RS25190 () 101922..102179 - 258 WP_000083833.1 replication regulatory protein RepA -
FMA85_RS25195 () 102463..102669 - 207 WP_015387399.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 102656..102717 + 62 NuclAT_1 - -
- () 102656..102717 + 62 NuclAT_1 - -
- () 102656..102717 + 62 NuclAT_1 - -
- () 102656..102717 + 62 NuclAT_1 - -
FMA85_RS25200 () 102856..103038 - 183 WP_000968309.1 hypothetical protein -
FMA85_RS25205 () 103139..103841 + 703 Protein_118 IS1 family transposase IS1S Transposase
FMA85_RS25210 () 104142..104354 - 213 WP_005012601.1 hypothetical protein -
FMA85_RS25215 () 104487..105047 - 561 WP_000139363.1 fertility inhibition protein FinO -
FMA85_RS25220 () 105102..105848 - 747 WP_000205701.1 conjugal transfer pilus acetylase TraX -
FMA85_RS25225 () 105868..111138 - 5271 WP_001553822.1 Multifunctional conjugation protein TraI Relaxase
FMA85_RS25230 () 111138..113309 - 2172 WP_012372807.1 type IV conjugative transfer system coupling protein TraD -
FMA85_RS25235 () 113561..114292 - 732 WP_000850424.1 complement resistance protein TraT -
FMA85_RS25240 () 114361..114816 - 456 WP_001553825.1 conjugal transfer entry exclusion protein TraS -
FMA85_RS25245 () 114813..117638 - 2826 WP_001553826.1 conjugal transfer mating pair stabilization protein TraG -
FMA85_RS25250 () 117635..119008 - 1374 WP_001553827.1 conjugal transfer protein TraH -
FMA85_RS25255 () 118995..119387 - 393 WP_001553828.1 F-type conjugal transfer protein TrbF -
FMA85_RS25260 () 119341..119714 - 374 Protein_129 P-type conjugative transfer protein TrbJ -
FMA85_RS25265 () 119644..120198 - 555 WP_001553830.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
FMA85_RS25270 () 120185..120469 - 285 WP_000624105.1 type-F conjugative transfer system pilin chaperone TraQ -
FMA85_RS25275 () 120550..120885 + 336 WP_000415571.1 hypothetical protein -
FMA85_RS25280 () 120866..121207 - 342 WP_000556794.1 conjugal transfer protein TrbA -
FMA85_RS25285 () 121221..121964 - 744 WP_001030378.1 type-F conjugative transfer system pilin assembly protein TraF -
FMA85_RS25290 () 121957..122214 - 258 WP_000864318.1 conjugal transfer protein TrbE -
FMA85_RS25295 () 122241..124049 - 1809 WP_001553831.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
FMA85_RS25300 () 124046..124684 - 639 WP_001553832.1 type-F conjugative transfer system pilin assembly protein TrbC -
FMA85_RS25305 () 124693..125685 - 993 WP_001553833.1 conjugal transfer pilus assembly protein TraU -
FMA85_RS25310 () 125682..126314 - 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
FMA85_RS25315 () 126311..126697 - 387 WP_000099690.1 type-F conjugative transfer system protein TrbI -
FMA85_RS25320 () 126694..129321 - 2628 WP_001064264.1 type IV secretion system protein TraC -
FMA85_RS25325 () 129481..129702 - 222 WP_001278692.1 conjugal transfer protein TraR -
FMA85_RS25330 () 129837..130352 - 516 WP_000809832.1 type IV conjugative transfer system lipoprotein TraV -
FMA85_RS25335 () 130349..130600 - 252 WP_001038342.1 conjugal transfer protein TrbG -
FMA85_RS25340 () 130593..130754 - 162 WP_000741714.1 conjugal transfer protein TrbD -
FMA85_RS25345 () 130776..130913 - 138 WP_001553834.1 conjugal transfer protein TrbD -
FMA85_RS25350 () 130900..131490 - 591 WP_000002787.1 conjugal transfer protein TraP -
FMA85_RS25355 () 131480..132907 - 1428 WP_001553836.1 conjugal transfer protein TraB -
FMA85_RS25360 () 132907..133611 - 705 WP_148713163.1 type-F conjugative transfer system secretin TraK -
FMA85_RS25365 () 133622..134188 - 567 WP_000399790.1 type IV conjugative transfer system protein TraE -
FMA85_RS25370 () 134210..134521 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
FMA85_RS25375 () 134536..134901 - 366 WP_000340282.1 type IV conjugative transfer system pilin TraA -
FMA85_RS25380 () 134944..135159 - 216 WP_001352842.1 conjugal transfer relaxosome protein TraY -
FMA85_RS25385 () 135295..135942 - 648 WP_000332520.1 conjugal transfer transcriptional regulator TraJ -
FMA85_RS25390 () 136133..136516 - 384 WP_001063020.1 relaxosome protein TraM -
FMA85_RS25395 () 136886..137458 + 573 WP_000949660.1 hypothetical protein VF
FMA85_RS25400 () 137754..138575 - 822 WP_001234465.1 DUF945 domain-containing protein -
FMA85_RS25405 () 138694..138981 - 288 WP_000107242.1 hypothetical protein -
FMA85_RS26310 () 139006..139212 - 207 WP_000275854.1 hypothetical protein -
FMA85_RS25415 () 139880..140038 - 159 WP_001302184.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 140103..140301 - 199 NuclAT_0 - -
- () 140103..140301 - 199 NuclAT_0 - -
- () 140103..140301 - 199 NuclAT_0 - -
- () 140103..140301 - 199 NuclAT_0 - -
FMA85_RS25420 () 140270..140375 - 106 Protein_161 plasmid SOS inhibition protein A -
FMA85_RS25425 () 140530..140847 + 318 Protein_162 IS110 family transposase -
FMA85_RS25430 () 141136..141387 - 252 Protein_163 iron-containing alcohol dehydrogenase -
FMA85_RS25435 () 141472..142095 - 624 WP_000912556.1 potassium channel family protein -
FMA85_RS25440 () 142111..142804 - 694 Protein_165 IS1 family transposase IS1A Transposase
FMA85_RS25445 () 142861..142965 + 105 Protein_166 thiosulfate reductase cytochrome B subunit -
FMA85_RS25450 () 143211..144605 - 1395 WP_001037799.1 carbohydrate porin -
FMA85_RS25455 () 144800..146233 - 1434 WP_024170639.1 glycoside hydrolase family 32 protein -
FMA85_RS25460 () 146230..147507 - 1278 WP_001083369.1 MFS transporter -
FMA85_RS25465 () 147570..149696 - 2127 WP_000253905.1 alpha-galactosidase -
FMA85_RS25470 () 149792..150802 - 1011 WP_153435661.1 substrate-binding domain-containing protein -
FMA85_RS25475 () 150960..151718 - 759 Protein_172 site-specific integrase -
FMA85_RS25480 () 151809..153037 + 1229 WP_152924612.1 IS3 family transposase IS2 Transposase
FMA85_RS25485 () 153022..153591 + 570 WP_089634947.1 hypothetical protein -
FMA85_RS25495 () 154692..154946 - 255 WP_047605447.1 hypothetical protein -
FMA85_RS25500 () 154972..155535 - 564 WP_001348621.1 class I SAM-dependent methyltransferase -
FMA85_RS25505 () 155583..156944 - 1362 WP_000170714.1 DUF3560 domain-containing protein -
FMA85_RS25510 () 156996..157226 - 231 WP_000218642.1 hypothetical protein -
FMA85_RS25515 () 158261..158452 - 192 WP_001027516.1 hypothetical protein -
FMA85_RS25520 () 158449..158871 - 423 WP_000271753.1 DUF1380 family protein -
FMA85_RS25525 () 158918..159220 - 303 WP_001671341.1 antirestriction protein -
FMA85_RS25535 () 159760..160536 - 777 WP_001753849.1 hypothetical protein -
FMA85_RS25540 () 160587..161021 - 435 WP_000274437.1 DUF1380 family protein -
FMA85_RS25545 () 161035..161256 - 222 WP_001104873.1 hypothetical protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance