MGE detailed information
MGE type: Conjugative plasmid MGE length: 121214 bp
Accession: NZ_CP038413 Location: 1..121214 Organism: Escherichia coli O157:H7 strain 493/89 Replicon: plasmid p493-89-1
Accession: NZ_CP038413 Location: 1..121214 Organism: Escherichia coli O157:H7 strain 493/89 Replicon: plasmid p493-89-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3172_RS27040 () | 647..733 | + | 87 | Protein_1 | IS3 family transposase ISEhe3 | Transposase |
| E3172_RS27045 () | 837..1025 | - | 189 | Protein_2 | hypothetical protein | - |
| E3172_RS27050 () | 1078..2076 | - | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| E3172_RS27055 () | 2150..3871 | - | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| E3172_RS27060 () | 3961..5067 | - | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| E3172_RS27065 () | 5067..5888 | - | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| E3172_RS27070 () | 7330..7823 | + | 494 | Protein_7 | IS1 family transposase IS1N | Transposase |
| E3172_RS27075 () | 7888..8709 | + | 822 | Protein_8 | IS3 family transposase ISEc16 | Transposase |
| E3172_RS27080 () | 8777..9556 | - | 780 | WP_001358883.1 | IS21 family transposase IS100kyp | Transposase |
| E3172_RS27085 () | 9556..10483 | - | 928 | Protein_10 | IS21 family transposase IS100kyp | Transposase |
| E3172_RS27090 () | 10568..10822 | + | 255 | Protein_11 | IS3 family transposase ISEc16 | Transposase |
| E3172_RS27095 () | 10852..11043 | + | 192 | Protein_12 | IS1 family transposase IS1N | Transposase |
| E3172_RS27100 () | 11420..12280 | - | 861 | WP_000704535.1 | putative protein YcjY | VF |
| E3172_RS27105 () | 12623..13023 | - | 401 | Protein_14 | IS66 family transposase ISCro1 | Transposase |
| E3172_RS27110 () | 13984..14961 | + | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| E3172_RS27115 () | 15295..15698 | - | 404 | Protein_16 | helix-turn-helix transcriptional regulator | - |
| E3172_RS27120 () | 16095..17087 | - | 993 | WP_000874080.1 | hypothetical protein | - |
| E3172_RS27125 () | 17109..17621 | - | 513 | WP_001220140.1 | Minor fimbrial protein PrsF | VF |
| E3172_RS27130 () | 17696..18259 | - | 564 | WP_000091805.1 | hypothetical protein | VF |
| E3172_RS27135 () | 18295..19026 | - | 732 | WP_000916502.1 | Chaperone protein PapD | VF |
| E3172_RS27140 () | 19095..21602 | - | 2508 | WP_000795033.1 | Outer membrane usher protein PapC | VF |
| E3172_RS27145 () | 21756..22328 | - | 573 | WP_000489762.1 | PAP fimbrial minor pilin protein | VF |
| E3172_RS27150 () | 22408..22932 | - | 525 | WP_000751015.1 | Pap fimbrial major pilin protein | VF |
| E3172_RS27155 () | 23450..23906 | - | 457 | Protein_24 | IS3 family transposase | - |
| E3172_RS27160 () | 23972..24448 | - | 477 | WP_000906713.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| E3172_RS27165 () | 24437..27307 | + | 2871 | Protein_26 | Tn3 family transposase | - |
| E3172_RS27170 () | 28395..29252 | - | 858 | WP_000130951.1 | incFII family plasmid replication initiator RepA | - |
| E3172_RS27175 () | 29245..29319 | - | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| E3172_RS27180 () | 29562..29810 | - | 249 | WP_000083848.1 | replication regulatory protein RepA | - |
| E3172_RS27185 () | 30094..30243 | - | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 30289..30347 | + | 59 | NuclAT_1 | - | Antitoxin Detail |
| - () | 30289..30347 | + | 59 | NuclAT_1 | - | Antitoxin Detail |
| - () | 30289..30347 | + | 59 | NuclAT_1 | - | Antitoxin Detail |
| - () | 30289..30347 | + | 59 | NuclAT_1 | - | Antitoxin Detail |
| E3172_RS27190 () | 30522..31112 | - | 591 | WP_000766799.1 | DUF2726 domain-containing protein | - |
| E3172_RS27195 () | 31150..31363 | - | 214 | Protein_32 | transcriptional regulator | - |
| E3172_RS27200 () | 31409..31870 | - | 462 | WP_001233860.1 | thermonuclease family protein | - |
| E3172_RS27205 () | 32116..32328 | - | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| E3172_RS27210 () | 32462..33022 | - | 561 | WP_000139383.1 | fertility inhibition protein FinO | - |
| E3172_RS27215 () | 33077..33823 | - | 747 | WP_000205743.1 | conjugal transfer pilus acetylase TraX | - |
| E3172_RS27220 () | 33843..39113 | - | 5271 | Protein_37 | Multifunctional conjugation protein TraI | Relaxase |
| E3172_RS27225 () | 39195..39422 | + | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| E3172_RS27230 () | 39422..39820 | + | 399 | WP_000911317.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| E3172_RS27235 () | 39829..42018 | - | 2190 | WP_024201115.1 | type IV conjugative transfer system coupling protein TraD | - |
| E3172_RS27240 () | 42271..43002 | - | 732 | WP_000782452.1 | complement resistance protein TraT | - |
| E3172_RS27245 () | 43051..43536 | - | 486 | WP_000605866.1 | hypothetical protein | - |
| E3172_RS27250 () | 43552..46374 | - | 2823 | WP_001006998.1 | conjugal transfer mating pair stabilization protein TraG | - |
| E3172_RS27255 () | 46371..47747 | - | 1377 | WP_000982836.1 | conjugal transfer protein TraH | - |
| E3172_RS27260 () | 47744..48106 | - | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| E3172_RS27265 () | 48036..48581 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| E3172_RS27270 () | 48568..48852 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| E3172_RS27275 () | 48971..49318 | - | 348 | WP_001287897.1 | conjugal transfer protein TrbA | - |
| E3172_RS27280 () | 49334..50077 | - | 744 | WP_001030381.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| E3172_RS27285 () | 50070..50327 | - | 258 | WP_000864336.1 | conjugal transfer protein TrbE | - |
| E3172_RS27290 () | 50354..52162 | - | 1809 | Protein_51 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| E3172_RS27295 () | 52159..52797 | - | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| E3172_RS27300 () | 52806..53798 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| E3172_RS27305 () | 53795..54427 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| E3172_RS27310 () | 54424..54810 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| E3172_RS27315 () | 54807..57434 | - | 2628 | WP_001064249.1 | type IV secretion system protein TraC | - |
| E3172_RS27320 () | 57594..57815 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| E3172_RS27325 () | 57950..58465 | - | 516 | WP_000809899.1 | type IV conjugative transfer system lipoprotein TraV | - |
| E3172_RS27330 () | 58462..58713 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| E3172_RS27335 () | 58725..58955 | - | 231 | WP_001398289.1 | conjugal transfer protein TrbD | - |
| E3172_RS27340 () | 58909..59028 | - | 120 | Protein_61 | hypothetical protein | - |
| E3172_RS27345 () | 59035..59940 | - | 906 | Protein_62 | IS3 family transposase ISEc31 | Transposase |
| E3172_RS27350 () | 59950..61101 | - | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| E3172_RS27355 () | 61169..61471 | - | 303 | Protein_64 | IS3 family transposase ISEc31 | Transposase |
| E3172_RS27360 () | 61492..61692 | - | 201 | WP_000146661.1 | hypothetical protein | - |
| E3172_RS27365 () | 61692..62396 | - | 705 | WP_148713375.1 | type-F conjugative transfer system secretin TraK | - |
| E3172_RS27370 () | 62407..62973 | - | 567 | WP_000399795.1 | type IV conjugative transfer system protein TraE | - |
| E3172_RS27375 () | 62995..63306 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| E3172_RS27380 () | 63321..63719 | - | 399 | WP_000340281.1 | type IV conjugative transfer system pilin TraA | - |
| E3172_RS27385 () | 63762..63977 | - | 216 | WP_000086379.1 | conjugal transfer relaxosome protein TraY | - |
| E3172_RS27390 () | 64113..64760 | - | 648 | WP_000332519.1 | conjugal transfer transcriptional regulator TraJ | - |
| E3172_RS27395 () | 64951..65334 | - | 384 | WP_001063021.1 | relaxosome protein TraM | - |
| E3172_RS27400 () | 65685..66275 | + | 591 | WP_168940513.1 | hypothetical protein | VF |
| E3172_RS27405 () | 66571..67392 | - | 822 | WP_001234448.1 | DUF945 domain-containing protein | - |
| E3172_RS27410 () | 67512..67709 | - | 198 | WP_045174704.1 | hypothetical protein | - |
| E3172_RS27415 () | 67862..68098 | + | 237 | WP_086260624.1 | hypothetical protein | - |
| E3172_RS27420 () | 68034..68219 | - | 186 | Protein_77 | hypothetical protein | - |
| E3172_RS27425 () | 68142..68459 | + | 318 | WP_000820278.1 | hypothetical protein | - |
| E3172_RS27430 () | 68697..68855 | - | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 68920..69118 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 68920..69118 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 68920..69118 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| - () | 68920..69118 | - | 199 | NuclAT_0 | - | Antitoxin Detail |
| E3172_RS27435 () | 69130..69849 | - | 720 | WP_001276249.1 | plasmid SOS inhibition protein A | - |
| E3172_RS27440 () | 69846..70280 | - | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| E3172_RS27445 () | 70335..72293 | - | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| E3172_RS27450 () | 72359..72592 | - | 234 | WP_000005995.1 | DUF905 family protein | - |
| E3172_RS27455 () | 72649..73101 | - | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| E3172_RS27460 () | 73127..73333 | - | 207 | WP_000547965.1 | hypothetical protein | - |
| E3172_RS27465 () | 73403..73846 | + | 444 | WP_001492078.1 | hypothetical protein | - |
| E3172_RS27470 () | 73932..74495 | - | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| E3172_RS27475 () | 74542..75903 | - | 1362 | WP_000199440.1 | DUF3560 domain-containing protein | - |
| E3172_RS27480 () | 75955..76185 | - | 231 | WP_000218643.1 | hypothetical protein | - |
| E3172_RS27485 () | 76702..77223 | + | 522 | WP_054485071.1 | hypothetical protein | - |
| E3172_RS27490 () | 77193..77384 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| E3172_RS27495 () | 77381..77803 | - | 423 | WP_000271685.1 | DUF1380 family protein | - |
| E3172_RS27500 () | 77850..78152 | - | 303 | WP_010891293.1 | antirestriction protein | - |
| E3172_RS27505 () | 78248..78820 | - | 573 | WP_001310284.1 | DUF1472 domain-containing protein | - |
| E3172_RS27510 () | 79136..79469 | - | 334 | Protein_95 | hypothetical protein | - |
| E3172_RS27515 () | 79515..80069 | - | 555 | WP_001358893.1 | DUF1380 family protein | - |
| E3172_RS27520 () | 79963..80184 | - | 222 | WP_001104869.1 | hypothetical protein | - |
| E3172_RS27525 () | 80185..80868 | - | 684 | WP_000085945.1 | DNA methylase | - |
| E3172_RS27530 () | 80945..81250 | - | 306 | WP_010891292.1 | hypothetical protein | - |
| E3172_RS27535 () | 81254..82156 | - | 903 | WP_001414532.1 | DUF1281 domain-containing protein | - |
| E3172_RS27540 () | 82937..83908 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| E3172_RS27545 () | 83908..85074 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| E3172_RS27550 () | 85662..86417 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| E3172_RS27555 () | 87138..87944 | - | 807 | WP_000016989.1 | site-specific integrase | - |
| E3172_RS27560 () | 87945..88250 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E3172_RS27565 () | 88252..88470 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E3172_RS27570 () | 88929..89612 | + | 684 | WP_010891291.1 | DNA-binding protein | - |
| E3172_RS27575 () | 89609..90229 | + | 621 | WP_001248529.1 | hypothetical protein | - |
| E3172_RS27580 () | 90226..91014 | + | 789 | WP_000708303.1 | DUF2971 domain-containing protein | - |
| E3172_RS27585 () | 91050..91790 | + | 741 | WP_000933099.1 | abortive infection family protein | - |
| E3172_RS27590 () | 91949..92890 | - | 942 | WP_000554874.1 | hypothetical protein | - |
| E3172_RS27595 () | 93677..94654 | + | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| E3172_RS27600 () | 94939..95679 | - | 741 | WP_001066926.1 | IS91 family transposase ISMno23 | Transposase |
| E3172_RS27605 () | 95800..96030 | - | 231 | WP_010891288.1 | hypothetical protein | - |
| E3172_RS27610 () | 96161..96653 | - | 493 | Protein_115 | MarR family transcriptional regulator | - |
| E3172_RS27615 () | 96774..98213 | - | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| E3172_RS27620 () | 98217..100337 | - | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| E3172_RS27625 () | 100387..103383 | - | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| E3172_RS27630 () | 103385..103900 | - | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| E3172_RS27635 () | 104441..105346 | - | 906 | Protein_120 | IS3 family transposase ISLad1 | Transposase |
| E3172_RS27640 () | 105411..106562 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| E3172_RS27645 () | 106482..106832 | - | 351 | WP_000747069.1 | IS3 family transposase IS911 | Transposase |
| E3172_RS27650 () | 107011..107412 | - | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| E3172_RS27655 () | 107504..108337 | - | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| E3172_RS27660 () | 108395..108907 | - | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| E3172_RS27665 () | 108894..110066 | - | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| E3172_RS27670 () | 110105..111082 | - | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| E3172_RS27675 () | 111079..111678 | - | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| E3172_RS27680 () | 111675..112022 | - | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| E3172_RS27685 () | 112037..112591 | - | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| E3172_RS27690 () | 112588..113022 | - | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| E3172_RS27695 () | 113053..114276 | - | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| E3172_RS27700 () | 114278..115783 | - | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| E3172_RS27705 () | 115783..117750 | - | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| E3172_RS27710 () | 117751..118626 | - | 876 | WP_001454500.1 | Type II secretion system protein C | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|