MGE detailed information
MGE type: Conjugative plasmid MGE length: 89963 bp
Accession: NZ_CP035314 Location: 1..89963 Organism: Escherichia coli strain D72 Replicon: plasmid pD72-F33
Accession: NZ_CP035314 Location: 1..89963 Organism: Escherichia coli strain D72 Replicon: plasmid pD72-F33
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ERL60_RS22835 () | 10..813 | + | 804 | Protein_1 | Mobilization protein A | Relaxase |
| ERL60_RS22840 () | 826..1410 | + | 585 | WP_023281055.1 | mobilization protein MobX | - |
| ERL60_RS22845 () | 1453..4089 | - | 2637 | WP_023281054.1 | DEAD/DEAH box helicase family protein | - |
| ERL60_RS22850 () | 4094..6142 | - | 2049 | WP_023281053.1 | site-specific DNA-methyltransferase | - |
| ERL60_RS22855 () | 6391..6594 | - | 204 | WP_001567330.1 | hypothetical protein | - |
| ERL60_RS22860 () | 6637..7044 | - | 408 | WP_001567331.1 | hypothetical protein | - |
| ERL60_RS22865 () | 7116..7658 | - | 543 | WP_039021303.1 | hypothetical protein | - |
| ERL60_RS22870 () | 7642..8091 | - | 450 | WP_039021304.1 | hypothetical protein | - |
| ERL60_RS22875 () | 8102..8641 | - | 540 | WP_039021305.1 | hypothetical protein | - |
| ERL60_RS23995 () | 9161..9310 | - | 150 | WP_152930637.1 | hypothetical protein | - |
| ERL60_RS22880 () | 9289..9738 | - | 450 | WP_023281052.1 | hypothetical protein | - |
| ERL60_RS22885 () | 9746..9940 | - | 195 | Protein_12 | replication initiation protein | - |
| ERL60_RS22890 () | 10049..10753 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| ERL60_RS22895 () | 10803..11546 | + | 744 | Protein_14 | Beta-lactamase TEM | ARG |
| ERL60_RS22900 () | 11805..12281 | + | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| ERL60_RS22905 () | 12328..13203 | - | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| ERL60_RS22910 () | 13625..14329 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| ERL60_RS22920 () | 15288..15522 | + | 235 | Protein_18 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| ERL60_RS22925 () | 15650..15931 | + | 282 | WP_001333089.1 | hypothetical protein | - |
| ERL60_RS22930 () | 16054..16404 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| ERL60_RS22935 () | 16407..17369 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| ERL60_RS22940 () | 17516..17809 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| ERL60_RS22950 () | 17886..18569 | + | 684 | WP_000085883.1 | DNA methylase | - |
| ERL60_RS22955 () | 18570..18791 | + | 222 | WP_001104881.1 | hypothetical protein | - |
| ERL60_RS22960 () | 18805..19239 | + | 435 | WP_000274503.1 | DUF1380 family protein | - |
| ERL60_RS24070 () | 19290..20066 | + | 777 | WP_001383963.1 | hypothetical protein | - |
| ERL60_RS22975 () | 20607..20909 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| ERL60_RS22980 () | 20956..21378 | + | 423 | WP_000271762.1 | DUF1380 family protein | - |
| ERL60_RS22985 () | 21375..21566 | + | 192 | WP_001027493.1 | hypothetical protein | - |
| ERL60_RS22995 () | 22604..22834 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| ERL60_RS23000 () | 22886..24247 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| ERL60_RS23005 () | 24294..24857 | + | 564 | WP_015059007.1 | class I SAM-dependent methyltransferase | - |
| ERL60_RS23025 () | 25724..26251 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| ERL60_RS23030 () | 26309..26542 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| ERL60_RS23035 () | 26603..28626 | + | 2024 | Protein_35 | ParB/RepB/Spo0J family partition protein | - |
| ERL60_RS23040 () | 28695..29129 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| ERL60_RS23045 () | 29126..29845 | + | 720 | WP_131419573.1 | plasmid SOS inhibition protein A | - |
| - () | 29857..30081 | + | 225 | NuclAT_0 | - | - |
| - () | 29857..30081 | + | 225 | NuclAT_0 | - | - |
| - () | 29857..30081 | + | 225 | NuclAT_0 | - | - |
| - () | 29857..30081 | + | 225 | NuclAT_0 | - | - |
| ERL60_RS24000 () | 29866..30045 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| ERL60_RS23050 () | 30125..30283 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| ERL60_RS24075 () | 30521..30898 | - | 378 | Protein_40 | hypothetical protein | - |
| ERL60_RS23070 () | 31198..31494 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| ERL60_RS23075 () | 31605..32426 | + | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| ERL60_RS23080 () | 32723..33370 | - | 648 | WP_015059008.1 | hypothetical protein | VF |
| ERL60_RS23085 () | 33647..34030 | + | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| ERL60_RS23090 () | 34221..34907 | + | 687 | WP_015059009.1 | PAS domain-containing protein | - |
| ERL60_RS23095 () | 35001..35228 | + | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| ERL60_RS23100 () | 35262..35627 | + | 366 | WP_021519752.1 | type IV conjugative transfer system pilin TraA | - |
| ERL60_RS23105 () | 35642..35953 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| ERL60_RS23110 () | 35975..36541 | + | 567 | WP_000399794.1 | type IV conjugative transfer system protein TraE | - |
| ERL60_RS23115 () | 36552..37256 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| ERL60_RS23120 () | 37256..38683 | + | 1428 | WP_032297072.1 | conjugal transfer protein TraB | - |
| ERL60_RS23125 () | 38673..39263 | + | 591 | WP_000002778.1 | conjugal transfer protein TraP | - |
| ERL60_RS23130 () | 39217..39447 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| ERL60_RS23135 () | 39459..39710 | + | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| ERL60_RS23140 () | 39707..40222 | + | 516 | WP_000809902.1 | type IV conjugative transfer system lipoprotein TraV | - |
| ERL60_RS23145 () | 40357..40578 | + | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| ERL60_RS23150 () | 40738..43365 | + | 2628 | WP_015059012.1 | type IV secretion system protein TraC | - |
| ERL60_RS23155 () | 43362..43748 | + | 387 | WP_015059013.1 | type-F conjugative transfer system protein TrbI | - |
| ERL60_RS23160 () | 43745..44377 | + | 633 | WP_001203735.1 | type-F conjugative transfer system protein TraW | - |
| ERL60_RS23165 () | 44374..45366 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| ERL60_RS23170 () | 45393..45701 | + | 309 | WP_000412447.1 | hypothetical protein | - |
| ERL60_RS23175 () | 45764..46285 | + | 522 | WP_015059014.1 | hypothetical protein | - |
| ERL60_RS23180 () | 46312..46950 | + | 639 | WP_000087532.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| ERL60_RS23185 () | 46947..47318 | + | 372 | WP_000056336.1 | hypothetical protein | - |
| ERL60_RS23190 () | 47344..47766 | + | 423 | WP_001229309.1 | HNH endonuclease | - |
| ERL60_RS23195 () | 47763..49613 | + | 1851 | WP_015059015.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| ERL60_RS23200 () | 49640..49897 | + | 258 | WP_053913405.1 | conjugal transfer protein TrbE | - |
| ERL60_RS23205 () | 49890..50633 | + | 744 | WP_015059017.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| ERL60_RS23210 () | 50749..51030 | + | 282 | WP_000549793.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| ERL60_RS23215 () | 51017..51562 | + | 546 | WP_000059817.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| ERL60_RS23220 () | 51492..51866 | + | 375 | WP_071776752.1 | P-type conjugative transfer protein TrbJ | - |
| ERL60_RS23225 () | 51820..52212 | + | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| ERL60_RS23230 () | 52199..53572 | + | 1374 | WP_000944325.1 | conjugal transfer protein TraH | - |
| ERL60_RS23235 () | 53569..56385 | + | 2817 | WP_015059018.1 | conjugal transfer mating pair stabilization protein TraG | - |
| ERL60_RS23240 () | 56418..56939 | + | 522 | WP_000632668.1 | conjugal transfer entry exclusion protein TraS | - |
| ERL60_RS23245 () | 56964..57695 | + | 732 | WP_021559024.1 | complement resistance protein TraT | - |
| ERL60_RS23250 () | 57898..58635 | + | 738 | WP_015059020.1 | hypothetical protein | - |
| ERL60_RS23255 () | 58686..60866 | + | 2181 | WP_021518883.1 | type IV conjugative transfer system coupling protein TraD | - |
| ERL60_RS23260 () | 60866..66136 | + | 5271 | WP_131419575.1 | Multifunctional conjugation protein TraI | Relaxase |
| ERL60_RS23265 () | 66156..66902 | + | 747 | WP_000205770.1 | conjugal transfer pilus acetylase TraX | - |
| ERL60_RS23270 () | 66957..67517 | + | 561 | WP_000139328.1 | fertility inhibition protein FinO | - |
| ERL60_RS23275 () | 67649..67849 | + | 201 | WP_015059022.1 | hypothetical protein | - |
| ERL60_RS23280 () | 68235..68834 | + | 600 | WP_032083981.1 | hypothetical protein | - |
| - () | 69429..69488 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 69429..69488 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 69429..69488 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 69429..69488 | - | 60 | NuclAT_1 | - | Antitoxin Detail |
| ERL60_RS23295 () | 69533..69682 | + | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| ERL60_RS23300 () | 69966..70214 | + | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| ERL60_RS23310 () | 70459..70533 | + | 75 | WP_001375168.1 | RepA leader peptide Tap | - |
| ERL60_RS23315 () | 70526..71383 | + | 858 | WP_032495102.1 | incFII family plasmid replication initiator RepA | - |
| ERL60_RS23325 () | 72322..72975 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| ERL60_RS23330 () | 73068..73325 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| ERL60_RS23335 () | 73258..73659 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| ERL60_RS23340 () | 73908..74323 | + | 416 | Protein_91 | IS1 family transposase IS1R | Transposase |
| ERL60_RS23345 () | 74359..74904 | - | 546 | Protein_92 | Tn3 family transposase TnpA_Tn3 | Transposase |
| ERL60_RS24005 () | 74970..75062 | - | 93 | Protein_93 | IS6 family transposase | - |
| ERL60_RS23355 () | 75228..76427 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| ERL60_RS23360 () | 76437..76625 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| ERL60_RS23365 () | 76799..77089 | - | 291 | WP_000111771.1 | hypothetical protein | - |
| ERL60_RS23375 () | 77385..77615 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| ERL60_RS23380 () | 77612..78028 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| ERL60_RS23385 () | 78190..80328 | - | 2139 | WP_000350638.1 | AAA family ATPase | - |
| ERL60_RS23390 () | 80682..80939 | + | 258 | WP_000343085.1 | hypothetical protein | - |
| ERL60_RS23395 () | 80939..81529 | + | 591 | WP_000194575.1 | hypothetical protein | - |
| ERL60_RS23400 () | 81792..83348 | + | 1557 | WP_000818556.1 | AAA family ATPase | - |
| ERL60_RS23405 () | 83540..84157 | + | 618 | WP_000521603.1 | hypothetical protein | - |
| ERL60_RS23410 () | 84450..85487 | - | 1038 | WP_044502555.1 | permease | - |
| ERL60_RS23415 () | 85592..85915 | + | 324 | WP_001175594.1 | helix-turn-helix domain-containing protein | - |
| ERL60_RS23420 () | 86114..86818 | + | 705 | WP_102204227.1 | IS6 family transposase IS15DI | Transposase |
| ERL60_RS23425 () | 86848..87552 | + | 705 | WP_032193599.1 | replication initiation protein | - |
| ERL60_RS23440 () | 89155..89751 | - | 597 | WP_000583524.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|