MGE detailed information
MGE type: Prophage MGE length: 55206 bp
Accession: NZ_CP034259 Location: 2040226..2095431 Organism: Staphylococcus aureus strain P1D12C1 Replicon: chromosome
Accession: NZ_CP034259 Location: 2040226..2095431 Organism: Staphylococcus aureus strain P1D12C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFD74_RS10015 () | 2036724..2037014 | - | 291 | WP_000671712.1 | MAP domain-containing protein | - |
| EFD74_RS10020 () | 2037025..2038458 | - | 1434 | WP_001558588.1 | extracellular adherence protein Eap/Map | - |
| EFD74_RS10025 () | 2038844..2039094 | + | 251 | Protein_1921 | sphingomyelin phosphodiesterase | - |
| EFD74_RS10030 () | 2039416..2039595 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| EFD74_RS10035 () | 2039913..2040173 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| EFD74_RS10040 () | 2040226..2040576 | - | 351 | WP_000702262.1 | Staphylococcal complement inhibitor | VF |
| EFD74_RS10045 () | 2041259..2041708 | + | 450 | WP_000727645.1 | Chemotaxis inhibitory protein | VF |
| EFD74_RS10050 () | 2041803..2042137 | - | 335 | Protein_1926 | SH3 domain-containing protein | - |
| EFD74_RS10055 () | 2042784..2043275 | - | 492 | WP_000920042.1 | Staphylokinase | VF |
| EFD74_RS10060 () | 2043466..2044221 | - | 756 | WP_002955266.1 | CHAP domain-containing protein | - |
| EFD74_RS10065 () | 2044233..2044487 | - | 255 | WP_000611512.1 | phage holin | - |
| EFD74_RS10070 () | 2044539..2044646 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 2044568..2044707 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2044568..2044707 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2044568..2044707 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2044568..2044707 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| EFD74_RS10075 () | 2044699..2044875 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| EFD74_RS10080 () | 2045078..2045851 | - | 774 | WP_025174055.1 | Enterotoxin type E | VF |
| EFD74_RS10085 () | 2046272..2046646 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| EFD74_RS10090 () | 2046702..2046989 | - | 288 | WP_001262621.1 | hypothetical protein | - |
| EFD74_RS10095 () | 2047035..2047187 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| EFD74_RS10100 () | 2047180..2050962 | - | 3783 | WP_156668036.1 | hypothetical protein | - |
| EFD74_RS10105 () | 2050978..2052462 | - | 1485 | WP_000567396.1 | phage tail family protein | - |
| EFD74_RS10110 () | 2052459..2056988 | - | 4530 | WP_000504568.1 | phage tail tape measure protein | - |
| EFD74_RS10115 () | 2057233..2057583 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| EFD74_RS10120 () | 2057633..2057857 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| EFD74_RS10125 () | 2057899..2058543 | - | 645 | WP_000268740.1 | phage tail protein | - |
| EFD74_RS10130 () | 2058544..2058951 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| EFD74_RS10135 () | 2058948..2059352 | - | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| EFD74_RS10140 () | 2059349..2059711 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| EFD74_RS10145 () | 2059695..2059979 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| EFD74_RS10150 () | 2059969..2060253 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| EFD74_RS10155 () | 2060273..2061418 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| EFD74_RS10160 () | 2061442..2062179 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| EFD74_RS10165 () | 2062163..2063350 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| EFD74_RS10170 () | 2063366..2065027 | - | 1662 | WP_112380264.1 | terminase large subunit | - |
| EFD74_RS10175 () | 2065024..2065368 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| EFD74_RS10180 () | 2065498..2065797 | - | 300 | WP_064125997.1 | HNH endonuclease | - |
| EFD74_RS10185 () | 2066029..2066445 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| EFD74_RS10190 () | 2066473..2066673 | - | 201 | WP_001557462.1 | DUF1514 family protein | - |
| EFD74_RS10195 () | 2066673..2066822 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| EFD74_RS10200 () | 2066819..2067025 | - | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| EFD74_RS10205 () | 2067022..2067267 | - | 246 | WP_001282077.1 | hypothetical protein | - |
| EFD74_RS10210 () | 2067304..2067840 | - | 537 | WP_000185693.1 | dUTPase | - |
| EFD74_RS10215 () | 2067837..2068082 | - | 246 | WP_001065108.1 | DUF1024 family protein | - |
| EFD74_RS10220 () | 2068097..2068345 | - | 249 | WP_000178987.1 | hypothetical protein | - |
| EFD74_RS10225 () | 2068342..2068599 | - | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| EFD74_RS10230 () | 2068599..2068970 | - | 372 | WP_000101279.1 | hypothetical protein | - |
| EFD74_RS10235 () | 2068983..2069387 | - | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EFD74_RS10240 () | 2069396..2069614 | - | 219 | WP_000338528.1 | hypothetical protein | - |
| EFD74_RS10245 () | 2069621..2070514 | - | 894 | WP_156668037.1 | DnaD domain-containing protein | - |
| EFD74_RS10250 () | 2070544..2071014 | - | 471 | WP_000934759.1 | single-stranded DNA-binding protein | - |
| EFD74_RS10255 () | 2071015..2071632 | - | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| EFD74_RS10260 () | 2071713..2072633 | - | 921 | WP_000180600.1 | recombinase RecT | - |
| EFD74_RS10265 () | 2072635..2074571 | - | 1937 | Protein_1969 | AAA family ATPase | - |
| EFD74_RS10270 () | 2074580..2074843 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| EFD74_RS10275 () | 2074852..2075112 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
| EFD74_RS10280 () | 2075117..2075419 | - | 303 | WP_000165371.1 | DUF2482 family protein | - |
| EFD74_RS10285 () | 2075514..2075675 | - | 162 | WP_000048129.1 | DUF1270 family protein | - |
| EFD74_RS10290 () | 2075672..2075995 | - | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| EFD74_RS10295 () | 2076050..2076430 | + | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| EFD74_RS10300 () | 2076417..2076614 | - | 198 | WP_001148856.1 | hypothetical protein | - |
| EFD74_RS10305 () | 2076630..2077382 | - | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| EFD74_RS10310 () | 2077433..2077762 | + | 330 | WP_000128909.1 | hypothetical protein | - |
| EFD74_RS10315 () | 2077751..2077966 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| EFD74_RS10320 () | 2077982..2078245 | - | 264 | WP_000854072.1 | helix-turn-helix domain-containing protein | - |
| EFD74_RS10325 () | 2078242..2078416 | - | 175 | Protein_1981 | transcriptional regulator | - |
| EFD74_RS10330 () | 2078379..2079092 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| EFD74_RS10335 () | 2079108..2080040 | + | 933 | WP_000759682.1 | ATP-dependent helicase | - |
| EFD74_RS10340 () | 2080046..2080387 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| EFD74_RS10345 () | 2080591..2080773 | + | 183 | WP_000694772.1 | hypothetical protein | - |
| EFD74_RS10350 () | 2080873..2081856 | + | 984 | WP_001558608.1 | Putative teichuronic acid biosynthesis glycosyltransferase TuaG | VF |
| EFD74_RS10355 () | 2081867..2082109 | + | 243 | WP_000427213.1 | hypothetical protein | - |
| EFD74_RS10360 () | 2082172..2083209 | + | 1038 | WP_000857180.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EFD74_RS10365 () | 2083260..2084090 | + | 831 | Protein_1989 | Phospholipase C | VF |
| EFD74_RS10370 () | 2084328..2085344 | - | 1017 | WP_000595392.1 | putative leukocidin-like protein 1 | VF |
| EFD74_RS10375 () | 2085366..2086421 | - | 1056 | WP_000791411.1 | putative leukocidin-like protein 2 | VF |
| EFD74_RS10380 () | 2086857..2088080 | + | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| EFD74_RS10385 () | 2088583..2089890 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| EFD74_RS10390 () | 2090430..2092046 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| EFD74_RS10395 () | 2092122..2092406 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| EFD74_RS10400 () | 2092581..2093324 | + | 744 | WP_156668038.1 | CPBP family intramembrane metalloprotease | - |
| EFD74_RS10405 () | 2093349..2094608 | - | 1260 | WP_000120297.1 | hypothetical protein | VF |
| EFD74_RS10410 () | 2094805..2095431 | + | 627 | WP_000522381.1 | nitroreductase family protein | - |
| EFD74_RS10415 () | 2095792..2096577 | + | 786 | WP_000867951.1 | carbon-nitrogen family hydrolase | - |
| EFD74_RS10420 () | 2097177..2097311 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| EFD74_RS10425 () | 2097547..2098110 | + | 564 | WP_001105696.1 | accessory gene regulator ArgB-like protein | - |
| EFD74_RS10430 () | 2098113..2098256 | + | 144 | WP_001094921.1 | cyclic lactone autoinducer peptide | - |
| EFD74_RS10435 () | 2098286..2099569 | + | 1284 | WP_000447888.1 | sensor histidine kinase | - |
| EFD74_RS10440 () | 2099588..2100304 | + | 717 | WP_000688492.1 | LytTR family DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA6360, TA10116, TA20387 | NC_002745 | 2006528..2074317 | 0.008 |