MGE detailed information
MGE type: Prophage MGE length: 52181 bp
Accession: NZ_CP033987 Location: 2086970..2139150 Organism: Staphylococcus aureus strain P2D1C1 Replicon: chromosome
Accession: NZ_CP033987 Location: 2086970..2139150 Organism: Staphylococcus aureus strain P2D1C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFD76_RS10425 () | 2083468..2083758 | - | 291 | WP_000671712.1 | MAP domain-containing protein | - |
| EFD76_RS10430 () | 2083769..2085202 | - | 1434 | WP_001558588.1 | extracellular adherence protein Eap/Map | - |
| EFD76_RS10435 () | 2085588..2085838 | + | 251 | Protein_1976 | sphingomyelin phosphodiesterase | - |
| EFD76_RS10440 () | 2086160..2086339 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| EFD76_RS10445 () | 2086657..2086917 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| EFD76_RS10450 () | 2086970..2087320 | - | 351 | WP_000702262.1 | Staphylococcal complement inhibitor | VF |
| EFD76_RS10455 () | 2088003..2088452 | + | 450 | WP_000727645.1 | Chemotaxis inhibitory protein | VF |
| EFD76_RS10460 () | 2088547..2088881 | - | 335 | Protein_1981 | SH3 domain-containing protein | - |
| EFD76_RS10465 () | 2089528..2090019 | - | 492 | WP_000920042.1 | Staphylokinase | VF |
| EFD76_RS10470 () | 2090210..2090965 | - | 756 | WP_002955266.1 | CHAP domain-containing protein | - |
| EFD76_RS10475 () | 2090977..2091231 | - | 255 | WP_000611512.1 | phage holin | - |
| EFD76_RS10480 () | 2091283..2091390 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 2091312..2091451 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2091312..2091451 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2091312..2091451 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2091312..2091451 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| EFD76_RS10485 () | 2091443..2091619 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| EFD76_RS10490 () | 2091822..2092595 | - | 774 | WP_025174055.1 | Enterotoxin type E | VF |
| EFD76_RS10495 () | 2093016..2093390 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| EFD76_RS10500 () | 2093446..2093733 | - | 288 | WP_001262621.1 | hypothetical protein | - |
| EFD76_RS10505 () | 2093779..2093931 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| EFD76_RS10510 () | 2093924..2097706 | - | 3783 | WP_156668036.1 | hypothetical protein | - |
| EFD76_RS10515 () | 2097722..2099206 | - | 1485 | WP_000567396.1 | phage tail family protein | - |
| EFD76_RS10520 () | 2099203..2103732 | - | 4530 | WP_000504568.1 | phage tail tape measure protein | - |
| EFD76_RS14460 () | 2103789..2103926 | - | 138 | WP_001549167.1 | hypothetical protein | - |
| EFD76_RS10525 () | 2103977..2104327 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| EFD76_RS10530 () | 2104377..2104601 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| EFD76_RS10535 () | 2104643..2105287 | - | 645 | WP_000268740.1 | phage tail protein | - |
| EFD76_RS10540 () | 2105288..2105695 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| EFD76_RS10545 () | 2105692..2106096 | - | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| EFD76_RS10550 () | 2106093..2106455 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| EFD76_RS10555 () | 2106439..2106723 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| EFD76_RS10560 () | 2106713..2106997 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| EFD76_RS10565 () | 2107017..2108162 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| EFD76_RS10570 () | 2108186..2108923 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| EFD76_RS10575 () | 2108907..2110094 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| EFD76_RS10580 () | 2110110..2111771 | - | 1662 | WP_112380264.1 | terminase large subunit | - |
| EFD76_RS10585 () | 2111768..2112112 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| EFD76_RS10590 () | 2112242..2112541 | - | 300 | WP_064125997.1 | HNH endonuclease | - |
| EFD76_RS10595 () | 2112773..2113189 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| EFD76_RS10600 () | 2113217..2113417 | - | 201 | WP_001557462.1 | DUF1514 family protein | - |
| EFD76_RS10605 () | 2113417..2113566 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| EFD76_RS10610 () | 2113563..2113769 | - | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| EFD76_RS10615 () | 2113766..2114011 | - | 246 | WP_001282077.1 | hypothetical protein | - |
| EFD76_RS10620 () | 2114048..2114584 | - | 537 | WP_000185693.1 | dUTPase | - |
| EFD76_RS10625 () | 2114581..2114826 | - | 246 | WP_001065108.1 | DUF1024 family protein | - |
| EFD76_RS10630 () | 2114841..2115089 | - | 249 | WP_000178987.1 | hypothetical protein | - |
| EFD76_RS10635 () | 2115086..2115343 | - | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| EFD76_RS10640 () | 2115343..2115714 | - | 372 | WP_000101279.1 | hypothetical protein | - |
| EFD76_RS10645 () | 2115727..2116131 | - | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EFD76_RS10650 () | 2116140..2116358 | - | 219 | WP_000338528.1 | hypothetical protein | - |
| EFD76_RS10655 () | 2116365..2117258 | - | 894 | WP_156668037.1 | DnaD domain-containing protein | - |
| EFD76_RS10660 () | 2117288..2117758 | - | 471 | WP_000934759.1 | single-stranded DNA-binding protein | - |
| EFD76_RS10665 () | 2117759..2118376 | - | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| EFD76_RS10670 () | 2118457..2119377 | - | 921 | WP_000180600.1 | recombinase RecT | - |
| EFD76_RS10675 () | 2119379..2121315 | - | 1937 | Protein_2025 | AAA family ATPase | - |
| EFD76_RS10680 () | 2121324..2121587 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| EFD76_RS10685 () | 2121596..2121856 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
| EFD76_RS10690 () | 2121861..2122163 | - | 303 | WP_000165371.1 | DUF2482 family protein | - |
| EFD76_RS10695 () | 2122258..2122419 | - | 162 | WP_000048129.1 | DUF1270 family protein | - |
| EFD76_RS10700 () | 2122416..2122739 | - | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| EFD76_RS10705 () | 2122794..2123174 | + | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| EFD76_RS10710 () | 2123161..2123358 | - | 198 | WP_001148856.1 | hypothetical protein | - |
| EFD76_RS10715 () | 2123374..2124126 | - | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| EFD76_RS10720 () | 2124177..2124506 | + | 330 | WP_000128909.1 | hypothetical protein | - |
| EFD76_RS10725 () | 2124495..2124710 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| EFD76_RS10730 () | 2124726..2124989 | - | 264 | WP_000854072.1 | helix-turn-helix domain-containing protein | - |
| EFD76_RS10735 () | 2124986..2125160 | - | 175 | Protein_2037 | transcriptional regulator | - |
| EFD76_RS10740 () | 2125123..2125836 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| EFD76_RS10745 () | 2125852..2126784 | + | 933 | WP_000759682.1 | ATP-dependent helicase | - |
| EFD76_RS10750 () | 2126790..2127131 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| EFD76_RS10755 () | 2127335..2127517 | + | 183 | WP_000694772.1 | hypothetical protein | - |
| EFD76_RS10760 () | 2127617..2128600 | + | 984 | WP_001558608.1 | Putative teichuronic acid biosynthesis glycosyltransferase TuaG | VF |
| EFD76_RS10765 () | 2128611..2128853 | + | 243 | WP_000427213.1 | hypothetical protein | - |
| EFD76_RS10770 () | 2128916..2129953 | + | 1038 | WP_000857180.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EFD76_RS10775 () | 2130004..2130834 | + | 831 | Protein_2045 | Phospholipase C | VF |
| EFD76_RS10780 () | 2131072..2132088 | - | 1017 | WP_000595392.1 | putative leukocidin-like protein 1 | VF |
| EFD76_RS10785 () | 2132110..2133165 | - | 1056 | WP_000791411.1 | putative leukocidin-like protein 2 | VF |
| EFD76_RS10790 () | 2133601..2134824 | + | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| EFD76_RS10795 () | 2135327..2136634 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| EFD76_RS10800 () | 2137174..2138790 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| EFD76_RS10805 () | 2138866..2139150 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| EFD76_RS10810 () | 2139325..2140068 | + | 744 | WP_156668038.1 | CPBP family intramembrane metalloprotease | - |
| EFD76_RS10815 () | 2140093..2141352 | - | 1260 | WP_000120297.1 | hypothetical protein | - |
| EFD76_RS10820 () | 2141549..2142175 | + | 627 | WP_000522381.1 | nitroreductase family protein | - |
| EFD76_RS10825 () | 2142536..2143321 | + | 786 | WP_000867951.1 | carbon-nitrogen family hydrolase | - |
| EFD76_RS10830 () | 2143921..2144055 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA6360, TA10116, TA20387 | NC_002745 | 2006528..2074317 | 0.007 |