MGE detailed information
MGE type: Prophage MGE length: 52181 bp
Accession: NZ_CP033977 Location: 2086965..2139145 Organism: Staphylococcus aureus strain P2D15C1 Replicon: chromosome
Accession: NZ_CP033977 Location: 2086965..2139145 Organism: Staphylococcus aureus strain P2D15C1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EFD78_RS10440 () | 2083463..2083753 | - | 291 | WP_000671712.1 | MAP domain-containing protein | - |
| EFD78_RS10445 () | 2083764..2085197 | - | 1434 | WP_001558588.1 | extracellular adherence protein Eap/Map | - |
| EFD78_RS10450 () | 2085583..2085833 | + | 251 | Protein_1976 | sphingomyelin phosphodiesterase | - |
| EFD78_RS10455 () | 2086155..2086334 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| EFD78_RS10460 () | 2086652..2086912 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| EFD78_RS10465 () | 2086965..2087315 | - | 351 | WP_000702262.1 | Staphylococcal complement inhibitor | VF |
| EFD78_RS10470 () | 2087998..2088447 | + | 450 | WP_000727645.1 | Chemotaxis inhibitory protein | VF |
| EFD78_RS10475 () | 2088542..2088876 | - | 335 | Protein_1981 | SH3 domain-containing protein | - |
| EFD78_RS10480 () | 2089523..2090014 | - | 492 | WP_000920042.1 | Staphylokinase | VF |
| EFD78_RS10485 () | 2090205..2090960 | - | 756 | WP_002955266.1 | CHAP domain-containing protein | - |
| EFD78_RS10490 () | 2090972..2091226 | - | 255 | WP_000611512.1 | phage holin | - |
| EFD78_RS10495 () | 2091278..2091385 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 2091307..2091446 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2091307..2091446 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2091307..2091446 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2091307..2091446 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| EFD78_RS10500 () | 2091438..2091614 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| EFD78_RS10505 () | 2091817..2092590 | - | 774 | WP_025174055.1 | Enterotoxin type E | VF |
| EFD78_RS10510 () | 2093011..2093385 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| EFD78_RS10515 () | 2093441..2093728 | - | 288 | WP_001262621.1 | hypothetical protein | - |
| EFD78_RS10520 () | 2093774..2093926 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| EFD78_RS10525 () | 2093919..2097701 | - | 3783 | WP_156668036.1 | hypothetical protein | - |
| EFD78_RS10530 () | 2097717..2099201 | - | 1485 | WP_000567396.1 | phage tail family protein | - |
| EFD78_RS10535 () | 2099198..2103727 | - | 4530 | WP_000504568.1 | phage tail tape measure protein | - |
| EFD78_RS14485 () | 2103784..2103921 | - | 138 | WP_001549167.1 | hypothetical protein | - |
| EFD78_RS10540 () | 2103972..2104322 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| EFD78_RS10545 () | 2104372..2104596 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| EFD78_RS10550 () | 2104638..2105282 | - | 645 | WP_000268740.1 | phage tail protein | - |
| EFD78_RS10555 () | 2105283..2105690 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| EFD78_RS10560 () | 2105687..2106091 | - | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| EFD78_RS10565 () | 2106088..2106450 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| EFD78_RS10570 () | 2106434..2106718 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| EFD78_RS10575 () | 2106708..2106992 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| EFD78_RS10580 () | 2107012..2108157 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| EFD78_RS10585 () | 2108181..2108918 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| EFD78_RS10590 () | 2108902..2110089 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| EFD78_RS10595 () | 2110105..2111766 | - | 1662 | WP_112380264.1 | terminase large subunit | - |
| EFD78_RS10600 () | 2111763..2112107 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| EFD78_RS10605 () | 2112237..2112536 | - | 300 | WP_064125997.1 | HNH endonuclease | - |
| EFD78_RS10610 () | 2112768..2113184 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| EFD78_RS10615 () | 2113212..2113412 | - | 201 | WP_001557462.1 | DUF1514 family protein | - |
| EFD78_RS10620 () | 2113412..2113561 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| EFD78_RS10625 () | 2113558..2113764 | - | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| EFD78_RS10630 () | 2113761..2114006 | - | 246 | WP_001282077.1 | hypothetical protein | - |
| EFD78_RS10635 () | 2114043..2114579 | - | 537 | WP_000185693.1 | dUTPase | - |
| EFD78_RS10640 () | 2114576..2114821 | - | 246 | WP_001065108.1 | DUF1024 family protein | - |
| EFD78_RS10645 () | 2114836..2115084 | - | 249 | WP_000178987.1 | hypothetical protein | - |
| EFD78_RS10650 () | 2115081..2115338 | - | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| EFD78_RS10655 () | 2115338..2115709 | - | 372 | WP_000101279.1 | hypothetical protein | - |
| EFD78_RS10660 () | 2115722..2116126 | - | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EFD78_RS10665 () | 2116135..2116353 | - | 219 | WP_000338528.1 | hypothetical protein | - |
| EFD78_RS10670 () | 2116360..2117253 | - | 894 | WP_156668037.1 | DnaD domain-containing protein | - |
| EFD78_RS10675 () | 2117283..2117753 | - | 471 | WP_000934759.1 | single-stranded DNA-binding protein | - |
| EFD78_RS10680 () | 2117754..2118371 | - | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| EFD78_RS10685 () | 2118452..2119372 | - | 921 | WP_000180600.1 | recombinase RecT | - |
| EFD78_RS10690 () | 2119374..2121310 | - | 1937 | Protein_2025 | AAA family ATPase | - |
| EFD78_RS10695 () | 2121319..2121582 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| EFD78_RS10700 () | 2121591..2121851 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
| EFD78_RS10705 () | 2121856..2122158 | - | 303 | WP_000165371.1 | DUF2482 family protein | - |
| EFD78_RS10710 () | 2122253..2122414 | - | 162 | WP_000048129.1 | DUF1270 family protein | - |
| EFD78_RS10715 () | 2122411..2122734 | - | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| EFD78_RS10720 () | 2122789..2123169 | + | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| EFD78_RS10725 () | 2123156..2123353 | - | 198 | WP_001148856.1 | hypothetical protein | - |
| EFD78_RS10730 () | 2123369..2124121 | - | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| EFD78_RS10735 () | 2124172..2124501 | + | 330 | WP_000128909.1 | hypothetical protein | - |
| EFD78_RS10740 () | 2124490..2124705 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| EFD78_RS10745 () | 2124721..2124984 | - | 264 | WP_000854072.1 | helix-turn-helix domain-containing protein | - |
| EFD78_RS10750 () | 2124981..2125155 | - | 175 | Protein_2037 | transcriptional regulator | - |
| EFD78_RS10755 () | 2125118..2125831 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| EFD78_RS10760 () | 2125847..2126779 | + | 933 | WP_000759682.1 | ATP-dependent helicase | - |
| EFD78_RS10765 () | 2126785..2127126 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| EFD78_RS10770 () | 2127330..2127512 | + | 183 | WP_000694772.1 | hypothetical protein | - |
| EFD78_RS10775 () | 2127612..2128595 | + | 984 | WP_001558608.1 | Putative teichuronic acid biosynthesis glycosyltransferase TuaG | VF |
| EFD78_RS10780 () | 2128606..2128848 | + | 243 | WP_000427213.1 | hypothetical protein | - |
| EFD78_RS10785 () | 2128911..2129948 | + | 1038 | WP_000857180.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EFD78_RS10790 () | 2129999..2130829 | + | 831 | Protein_2045 | Phospholipase C | VF |
| EFD78_RS10795 () | 2131067..2132083 | - | 1017 | WP_000595392.1 | putative leukocidin-like protein 1 | VF |
| EFD78_RS10800 () | 2132105..2133160 | - | 1056 | WP_000791411.1 | putative leukocidin-like protein 2 | VF |
| EFD78_RS10805 () | 2133596..2134819 | + | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| EFD78_RS10810 () | 2135322..2136629 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| EFD78_RS10815 () | 2137169..2138785 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| EFD78_RS10820 () | 2138861..2139145 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| EFD78_RS10825 () | 2139320..2140063 | + | 744 | WP_156668038.1 | CPBP family intramembrane metalloprotease | - |
| EFD78_RS10830 () | 2140088..2141347 | - | 1260 | WP_000120297.1 | hypothetical protein | - |
| EFD78_RS10835 () | 2141544..2142170 | + | 627 | WP_000522381.1 | nitroreductase family protein | - |
| EFD78_RS10840 () | 2142531..2143316 | + | 786 | WP_000867951.1 | carbon-nitrogen family hydrolase | - |
| EFD78_RS10845 () | 2143916..2144050 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA6360, TA10116, TA20387 | NC_002745 | 2006528..2074317 | 0.007 |