MGE detailed information
MGE type: Conjugative plasmid MGE length: 139752 bp
Accession: NZ_CP033633 Location: 1..139752 Organism: Escherichia coli isolate ECCNB12-2 Replicon: plasmid pTB-nb2
Accession: NZ_CP033633 Location: 1..139752 Organism: Escherichia coli isolate ECCNB12-2 Replicon: plasmid pTB-nb2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CQP61_RS31335 () | 568..744 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| CQP61_RS01040 () | 895..1362 | - | 468 | WP_045145415.1 | thermonuclease family protein | - |
| CQP61_RS01045 () | 1527..2150 | + | 624 | WP_045145414.1 | DNA-binding protein | - |
| CQP61_RS01055 () | 2348..2563 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| CQP61_RS01060 () | 2567..2935 | - | 369 | WP_001302696.1 | hypothetical protein | - |
| CQP61_RS01065 () | 2947..3138 | - | 192 | WP_045145413.1 | hypothetical protein | - |
| CQP61_RS01070 () | 3235..3477 | - | 243 | WP_000650933.1 | hypothetical protein | - |
| CQP61_RS01075 () | 3806..3958 | + | 153 | WP_021532728.1 | Hok/Gef family protein | - |
| CQP61_RS01085 () | 4527..4679 | + | 153 | WP_001536636.1 | Hok/Gef family protein | - |
| CQP61_RS01090 () | 4676..4837 | - | 162 | WP_001138649.1 | hypothetical protein | - |
| CQP61_RS01095 () | 4993..5637 | - | 645 | WP_045145409.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CQP61_RS01100 () | 5724..7889 | - | 2166 | WP_045145407.1 | DotA/TraY family protein | - |
| CQP61_RS01105 () | 7962..8531 | - | 570 | WP_000650755.1 | conjugal transfer protein TraX | - |
| CQP61_RS01110 () | 8528..9733 | - | 1206 | WP_029391944.1 | conjugal transfer protein TraW | - |
| CQP61_RS01115 () | 9694..10311 | - | 618 | WP_029391943.1 | hypothetical protein | - |
| CQP61_RS01120 () | 10311..13355 | - | 3045 | WP_021552467.1 | hypothetical protein | - |
| CQP61_RS01125 () | 13531..13911 | - | 381 | WP_045145405.1 | hypothetical protein | - |
| CQP61_RS01130 () | 13911..14270 | - | 360 | WP_045145404.1 | hypothetical protein | - |
| CQP61_RS01135 () | 14336..15154 | - | 819 | WP_148936802.1 | conjugal transfer protein TraT | - |
| CQP61_RS01140 () | 15069..15320 | - | 252 | WP_001277575.1 | hypothetical protein | - |
| CQP61_RS01145 () | 15377..15775 | - | 399 | WP_029391936.1 | hypothetical protein | - |
| CQP61_RS01150 () | 15822..16349 | - | 528 | WP_001379391.1 | conjugal transfer protein TraQ | - |
| CQP61_RS01155 () | 16349..17062 | - | 714 | WP_021532717.1 | conjugal transfer protein TraP | - |
| CQP61_RS01160 () | 17059..18390 | - | 1332 | WP_045145399.1 | conjugal transfer protein TraO | - |
| CQP61_RS01165 () | 18394..19368 | - | 975 | WP_021532715.1 | hypothetical protein | VF |
| CQP61_RS01170 () | 19379..20074 | - | 696 | WP_045145396.1 | DotI/IcmL family type IV secretion protein | - |
| CQP61_RS01175 () | 20086..20436 | - | 351 | WP_021532713.1 | hypothetical protein | - |
| CQP61_RS01180 () | 20453..24298 | - | 3846 | WP_121832067.1 | DNA primase | - |
| CQP61_RS01185 () | 24652..25233 | - | 582 | WP_045145393.1 | hypothetical protein | - |
| CQP61_RS01190 () | 25465..25755 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| CQP61_RS01195 () | 25752..26900 | - | 1149 | WP_000775210.1 | putative protein YggR | VF |
| CQP61_RS01200 () | 26884..27720 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| CQP61_RS01205 () | 27717..28175 | - | 459 | WP_045145391.1 | DotD/TraH family lipoprotein | - |
| CQP61_RS01210 () | 28279..29481 | - | 1203 | WP_123891602.1 | conjugal transfer protein TraF | - |
| CQP61_RS01215 () | 29583..30404 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| CQP61_RS01220 () | 30678..30998 | + | 321 | WP_000695052.1 | hypothetical protein | - |
| CQP61_RS01225 () | 31090..31380 | - | 291 | WP_021532709.1 | hypothetical protein | - |
| CQP61_RS01230 () | 31422..32591 | - | 1170 | WP_021532708.1 | site-specific integrase | - |
| CQP61_RS01245 () | 33162..33539 | + | 378 | WP_089577059.1 | phage tail protein | - |
| CQP61_RS01250 () | 33544..34878 | - | 1335 | WP_072652285.1 | hypothetical protein | VF |
| CQP61_RS01255 () | 34875..35525 | - | 651 | WP_045147317.1 | A24 family peptidase | - |
| CQP61_RS01260 () | 35542..36018 | - | 477 | WP_021532704.1 | hypothetical protein | VF |
| CQP61_RS01265 () | 36077..36613 | - | 537 | WP_021532703.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| CQP61_RS01270 () | 36663..37763 | - | 1101 | WP_072667218.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| CQP61_RS01275 () | 37765..39273 | - | 1509 | WP_072721654.1 | Type II secretion system protein E | VF |
| CQP61_RS01280 () | 39370..39966 | - | 597 | WP_021547655.1 | hypothetical protein | - |
| CQP61_RS01285 () | 40062..40616 | - | 555 | Protein_47 | hypothetical protein | - |
| CQP61_RS01290 () | 40665..41117 | - | 453 | WP_021532698.1 | hypothetical protein | VF |
| CQP61_RS01295 () | 41107..42402 | - | 1296 | WP_021532697.1 | type 4b pilus protein PilO2 | - |
| CQP61_RS01300 () | 42423..44042 | - | 1620 | WP_021532696.1 | Outer membrane lipoprotein BfpB | VF |
| CQP61_RS01305 () | 44073..44510 | - | 438 | WP_021532695.1 | type IV pilus biogenesis protein PilM | - |
| CQP61_RS01310 () | 44515..45585 | - | 1071 | WP_021532694.1 | hypothetical protein | VF |
| CQP61_RS01315 () | 45707..46102 | + | 396 | WP_021532693.1 | hypothetical protein | - |
| CQP61_RS01320 () | 46607..46924 | - | 318 | WP_045145559.1 | PilI type IV pilus biogenesis protein | - |
| CQP61_RS01325 () | 46930..48624 | - | 1695 | WP_045145557.1 | flotillin family protein | - |
| CQP61_RS01330 () | 48651..49271 | - | 621 | WP_032353888.1 | DUF1449 family protein | - |
| CQP61_RS01340 () | 49538..50203 | - | 666 | WP_021547664.1 | hypothetical protein | - |
| CQP61_RS01345 () | 50344..50985 | - | 642 | WP_021547665.1 | hypothetical protein | - |
| CQP61_RS01355 () | 51686..52558 | + | 873 | WP_045145554.1 | incFII family plasmid replication initiator RepA | - |
| CQP61_RS31340 () | 53251..53418 | + | 168 | WP_045145553.1 | hypothetical protein | - |
| CQP61_RS01370 () | 53505..53756 | + | 252 | WP_045145550.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CQP61_RS01375 () | 53753..54040 | + | 288 | WP_032353555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CQP61_RS31345 () | 54050..54337 | + | 288 | WP_045145547.1 | hypothetical protein | - |
| CQP61_RS01390 () | 55498..55944 | + | 447 | WP_021560313.1 | Serine acetyltransferase | VF |
| CQP61_RS01395 () | 56224..56817 | - | 594 | WP_032353553.1 | proQ/FINO family protein | - |
| CQP61_RS01415 () | 57671..58859 | - | 1189 | Protein_66 | IS91 family transposase ISEc37 | Transposase |
| CQP61_RS01420 () | 58859..59224 | - | 366 | WP_072643186.1 | transposase | - |
| CQP61_RS01430 () | 59315..59590 | + | 276 | Protein_68 | protein McbF | - |
| CQP61_RS01435 () | 59634..60197 | + | 564 | WP_032353959.1 | pentapeptide repeat-containing protein | - |
| CQP61_RS01440 () | 60398..61606 | - | 1209 | WP_072643187.1 | IS256 family transposase IS1414 | Transposase |
| CQP61_RS01445 () | 61665..61940 | - | 276 | WP_032354012.1 | PerC family transcriptional regulator | - |
| CQP61_RS01450 () | 62030..62764 | + | 735 | WP_032354011.1 | helix-turn-helix domain-containing protein | - |
| CQP61_RS01455 () | 62919..63101 | - | 183 | Protein_73 | iron-containing alcohol dehydrogenase | - |
| CQP61_RS01460 () | 63174..64708 | + | 1535 | WP_089581263.1 | IS3 family transposase ISKpn38 | Transposase |
| CQP61_RS01465 () | 64770..65015 | + | 246 | Protein_75 | IS91 family transposase ISEc37 | Transposase |
| CQP61_RS01470 () | 65601..69098 | + | 3498 | WP_123891603.1 | Outer membrane protein IcsA autotransporter | VF |
| CQP61_RS01475 () | 69287..70012 | - | 726 | Protein_77 | IS256 family transposase IS1414 | Transposase |
| CQP61_RS01480 () | 70148..70453 | + | 306 | Protein_78 | IS3 family transposase ISEcB1 | Transposase |
| CQP61_RS31665 () | 71747..72007 | + | 261 | WP_032353703.1 | hypothetical protein | - |
| CQP61_RS01495 () | 72004..72594 | + | 591 | WP_032353705.1 | hypothetical protein | - |
| CQP61_RS01500 () | 73115..74473 | + | 1359 | WP_032353707.1 | esterase-like activity of phytase family protein | - |
| CQP61_RS01505 () | 74527..75253 | - | 727 | Protein_83 | IS256 family transposase IS1414 | Transposase |
| CQP61_RS01510 () | 75361..75741 | + | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| CQP61_RS01515 () | 75738..76085 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| CQP61_RS01520 () | 76135..77672 | + | 1538 | Protein_86 | IS66 family transposase ISEc8 | Transposase |
| CQP61_RS01525 () | 77811..78086 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CQP61_RS01530 () | 78086..78370 | - | 285 | WP_012006537.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| CQP61_RS01540 () | 78871..79461 | + | 591 | WP_000086536.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| CQP61_RS01545 () | 79508..79666 | + | 159 | Protein_90 | integrase core domain-containing protein | - |
| CQP61_RS01550 () | 79816..80814 | + | 999 | WP_032353474.1 | ABC transporter substrate-binding protein | - |
| CQP61_RS01555 () | 80814..81851 | + | 1038 | WP_032353476.1 | Fe(3+) dicitrate transport system permease protein FecD | VF |
| CQP61_RS01560 () | 81851..82612 | + | 762 | WP_000020503.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| CQP61_RS01565 () | 82669..83856 | + | 1188 | WP_160377741.1 | MFS transporter | - |
| CQP61_RS01570 () | 83934..84101 | - | 168 | Protein_95 | bacteriocin immunity protein | - |
| CQP61_RS01575 () | 84165..84862 | + | 698 | Protein_96 | IS1 family transposase | - |
| CQP61_RS01580 () | 84893..85072 | + | 180 | WP_077250632.1 | Hin recombinase | - |
| CQP61_RS01590 () | 85332..86195 | - | 864 | WP_021534910.1 | endonuclease/exonuclease/phosphatase family protein | - |
| CQP61_RS01595 () | 86377..87074 | - | 698 | Protein_99 | IS1 family transposase | - |
| CQP61_RS01600 () | 87305..87694 | - | 390 | WP_045146805.1 | cytochrome B562 | - |
| CQP61_RS01605 () | 88079..89566 | - | 1488 | Protein_101 | IncI1-type relaxase NikB | - |
| CQP61_RS01610 () | 89751..89981 | + | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CQP61_RS01615 () | 89978..90394 | + | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CQP61_RS01625 () | 90956..92169 | + | 1214 | WP_164473236.1 | IS3 family transposase IS629 | Transposase |
| CQP61_RS01630 () | 92560..93012 | + | 453 | WP_032353631.1 | N-acetyltransferase | - |
| CQP61_RS01635 () | 93044..93229 | - | 186 | WP_032353630.1 | hypothetical protein | - |
| CQP61_RS01640 () | 93277..93408 | - | 132 | Protein_107 | IS3 family transposase ISSfl10 | Transposase |
| CQP61_RS01650 () | 94390..94608 | + | 219 | WP_121832161.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CQP61_RS01655 () | 94610..94915 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CQP61_RS01660 () | 94916..95725 | + | 810 | WP_045145707.1 | site-specific integrase | - |
| CQP61_RS01665 () | 95863..96560 | + | 698 | Protein_111 | IS1 family transposase | - |
| CQP61_RS01670 () | 96577..97455 | - | 879 | Protein_112 | colicin-B | - |
| CQP61_RS01675 () | 97632..98129 | + | 498 | WP_072157241.1 | IS91 family transposase ISSod25 | Transposase |
| CQP61_RS01680 () | 98266..98541 | - | 276 | WP_001536593.1 | hypothetical protein | - |
| CQP61_RS01685 () | 98535..99179 | - | 645 | WP_000633911.1 | AAA family ATPase | - |
| CQP61_RS01690 () | 99408..100379 | + | 972 | WP_021580010.1 | stable plasmid inheritance protein | - |
| CQP61_RS01695 () | 100384..100776 | + | 393 | WP_000340830.1 | plasmid partitioning/stability family protein | - |
| CQP61_RS01700 () | 100781..102052 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| CQP61_RS01705 () | 102052..102489 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| CQP61_RS01710 () | 102486..102734 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| CQP61_RS01720 () | 103152..104054 | + | 903 | WP_123891605.1 | DUF1281 domain-containing protein | - |
| CQP61_RS01735 () | 104583..104885 | + | 303 | WP_072770674.1 | antirestriction protein | - |
| CQP61_RS01740 () | 104932..105351 | + | 420 | WP_000271736.1 | DUF1380 family protein | - |
| CQP61_RS01745 () | 105351..105542 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| CQP61_RS31670 () | 105875..105943 | - | 69 | Protein_125 | pilus protein | - |
| CQP61_RS01755 () | 106312..106839 | + | 528 | WP_029391983.1 | single-stranded DNA-binding protein | - |
| CQP61_RS01760 () | 106897..107130 | + | 234 | WP_021534894.1 | DUF905 domain-containing protein | - |
| CQP61_RS01765 () | 107194..109151 | + | 1958 | Protein_128 | ParB/RepB/Spo0J family partition protein | - |
| CQP61_RS01770 () | 109206..109640 | + | 435 | WP_029391985.1 | conjugation system SOS inhibitor PsiB | - |
| CQP61_RS01775 () | 109637..110356 | + | 720 | WP_045146528.1 | plasmid SOS inhibition protein A | - |
| CQP61_RS01780 () | 110353..110949 | + | 597 | WP_045146526.1 | hypothetical protein | - |
| CQP61_RS01790 () | 111415..111915 | + | 501 | WP_045146524.1 | antirestriction protein ArdA | - |
| CQP61_RS31355 () | 112132..112319 | - | 188 | Protein_133 | hypothetical protein | - |
| CQP61_RS01805 () | 112647..113081 | + | 435 | WP_000218850.1 | hypothetical protein | - |
| CQP61_RS01810 () | 113174..113440 | + | 267 | WP_021580018.1 | hypothetical protein | - |
| CQP61_RS01815 () | 113505..114467 | + | 963 | WP_045147178.1 | Recombination-promoting nuclease RpnA | VF |
| CQP61_RS31360 () | 114467..114703 | + | 237 | WP_169051179.1 | hypothetical protein | VF |
| CQP61_RS01820 () | 114762..114992 | + | 231 | WP_045147179.1 | hypothetical protein | VF |
| CQP61_RS01825 () | 115023..115274 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| CQP61_RS31365 () | 115333..115611 | - | 279 | WP_072048130.1 | hypothetical protein | - |
| CQP61_RS01835 () | 115855..116703 | + | 849 | WP_045147182.1 | DUF4942 domain-containing protein | - |
| CQP61_RS01840 () | 116789..117124 | - | 336 | WP_000157103.1 | hypothetical protein | - |
| CQP61_RS01845 () | 117357..117689 | + | 333 | WP_072648817.1 | nikA protein | - |
| CQP61_RS01850 () | 117701..120403 | + | 2703 | WP_072648818.1 | Protein TraI | Relaxase |
| CQP61_RS01855 () | 120472..120720 | + | 249 | WP_033810804.1 | cell growth regulatory protein MazE | - |
| CQP61_RS01860 () | 120720..121064 | + | 345 | WP_032354044.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CQP61_RS01865 () | 121100..121322 | - | 223 | Protein_147 | transposase | - |
| CQP61_RS01870 () | 121376..122094 | + | 719 | Protein_148 | IS3 family transposase | - |
| CQP61_RS01880 () | 122767..124275 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| CQP61_RS01885 () | 124365..124838 | + | 474 | Protein_150 | IS3 family transposase IS629 | Transposase |
| CQP61_RS01895 () | 125434..126216 | - | 783 | Protein_151 | IS21 family transposase IS100kyp | Transposase |
| CQP61_RS01900 () | 126213..127235 | - | 1023 | WP_121832204.1 | IS21 family transposase IS100kyp | Transposase |
| CQP61_RS01910 () | 129381..130609 | + | 1229 | WP_162829751.1 | IS3 family transposase IS2 | Transposase |
| CQP61_RS01915 () | 130811..131056 | + | 246 | WP_045148228.1 | hypothetical protein | - |
| CQP61_RS01920 () | 131143..132351 | + | 1209 | Protein_155 | IS256 family transposase IS1414 | Transposase |
| CQP61_RS01925 () | 132542..134113 | - | 1572 | WP_123891604.1 | IS66 family transposase ISCro1 | Transposase |
| CQP61_RS01930 () | 134133..134480 | - | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| CQP61_RS01935 () | 134480..135157 | - | 678 | WP_072740705.1 | IS66 family transposase ISCro1 | Transposase |
| CQP61_RS01945 () | 135490..137619 | - | 2130 | Protein_159 | TraM recognition domain-containing protein | - |
| CQP61_RS01950 () | 137600..138724 | - | 1125 | WP_045145418.1 | DsbC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|