MGE detailed information
MGE type: Conjugative plasmid MGE length: 139740 bp
Accession: NZ_CP029742 Location: 1..139740 Organism: Escherichia coli strain AR_0085 Replicon: plasmid unnamed1
Accession: NZ_CP029742 Location: 1..139740 Organism: Escherichia coli strain AR_0085 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM464_RS27255 () | 59..778 | + | 720 | WP_045146528.1 | plasmid SOS inhibition protein A | - |
| AM464_RS27260 () | 775..1227 | + | 453 | WP_106631284.1 | hypothetical protein | - |
| AM464_RS30075 () | 2665..2817 | + | 153 | WP_159457096.1 | hypothetical protein | - |
| AM464_RS27275 () | 3283..3783 | + | 501 | WP_045146524.1 | antirestriction protein ArdA | - |
| AM464_RS30355 () | 4000..4187 | - | 188 | Protein_6 | hypothetical protein | - |
| AM464_RS27290 () | 4515..4949 | + | 435 | WP_000218850.1 | hypothetical protein | - |
| AM464_RS27295 () | 5042..5308 | + | 267 | WP_021580018.1 | hypothetical protein | - |
| AM464_RS27300 () | 5373..6335 | + | 963 | WP_045147178.1 | Recombination-promoting nuclease RpnA | VF |
| AM464_RS30360 () | 6335..6571 | + | 237 | WP_169051179.1 | hypothetical protein | VF |
| AM464_RS27305 () | 6630..6860 | + | 231 | WP_045147179.1 | hypothetical protein | VF |
| AM464_RS27310 () | 6891..7142 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| AM464_RS30085 () | 7201..7479 | - | 279 | WP_072048130.1 | hypothetical protein | - |
| AM464_RS27320 () | 7723..8571 | + | 849 | WP_110844348.1 | DUF4942 domain-containing protein | - |
| AM464_RS27325 () | 8657..8992 | - | 336 | WP_000157103.1 | hypothetical protein | - |
| AM464_RS27330 () | 9225..9557 | + | 333 | WP_001291058.1 | hypothetical protein | - |
| AM464_RS27335 () | 9569..12280 | + | 2712 | WP_106631278.1 | Protein TraI | Relaxase |
| AM464_RS27340 () | 12348..12479 | + | 132 | Protein_18 | tolA family protein | - |
| AM464_RS27345 () | 12463..12861 | + | 399 | Protein_19 | IS3 family transposase IS629 | Transposase |
| AM464_RS27350 () | 12916..13593 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| AM464_RS27355 () | 13593..13940 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| AM464_RS27360 () | 13960..15531 | + | 1572 | WP_110843859.1 | IS66 family transposase ISCro1 | Transposase |
| AM464_RS27365 () | 15563..15961 | + | 399 | Protein_23 | IS3 family transposase IS629 | Transposase |
| AM464_RS30090 () | 16514..16840 | + | 327 | WP_162617001.1 | hypothetical protein | - |
| AM464_RS27375 () | 17232..17929 | + | 698 | Protein_25 | IS1 family transposase | - |
| AM464_RS27380 () | 18928..20121 | - | 1194 | Protein_26 | IS3 family transposase IS629 | Transposase |
| AM464_RS27390 () | 20711..23014 | - | 2304 | WP_106631268.1 | TraM recognition domain-containing protein | - |
| AM464_RS27395 () | 22995..24119 | - | 1125 | WP_021532733.1 | DsbC family protein | - |
| AM464_RS27400 () | 24116..25378 | - | 1263 | WP_106631267.1 | IncI1-type conjugal transfer protein TrbA | - |
| AM464_RS27405 () | 26043..26510 | - | 468 | WP_045145415.1 | thermonuclease family protein | - |
| AM464_RS27410 () | 26675..27298 | + | 624 | WP_045145414.1 | DNA-binding protein | - |
| AM464_RS27420 () | 27496..27711 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| AM464_RS27425 () | 27715..28083 | - | 369 | WP_001302696.1 | hypothetical protein | - |
| AM464_RS27430 () | 28095..28286 | - | 192 | WP_106631266.1 | hypothetical protein | - |
| AM464_RS27435 () | 28383..28625 | - | 243 | WP_000650933.1 | hypothetical protein | - |
| AM464_RS27440 () | 28954..29106 | + | 153 | WP_021532728.1 | Hok/Gef family protein | - |
| AM464_RS27450 () | 29675..29827 | + | 153 | WP_001536636.1 | Hok/Gef family protein | - |
| AM464_RS27455 () | 29824..29985 | - | 162 | WP_001138649.1 | hypothetical protein | - |
| AM464_RS27460 () | 30141..30272 | - | 132 | Protein_39 | ethanolamine utilization protein EutE | - |
| AM464_RS27465 () | 30367..30576 | + | 210 | WP_000062945.1 | HEAT repeat domain-containing protein | - |
| AM464_RS27470 () | 30641..31285 | - | 645 | WP_045145409.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| AM464_RS27475 () | 31372..33537 | - | 2166 | WP_106631265.1 | DotA/TraY family protein | - |
| AM464_RS27480 () | 33610..34179 | - | 570 | WP_000650755.1 | conjugal transfer protein TraX | - |
| AM464_RS27485 () | 34176..35381 | - | 1206 | WP_053287749.1 | conjugal transfer protein TraW | - |
| AM464_RS27490 () | 35339..35959 | - | 621 | WP_072643640.1 | conjugal transfer protein TraV | - |
| AM464_RS27495 () | 35959..39003 | - | 3045 | WP_095454468.1 | conjugal transfer protein | - |
| AM464_RS30095 () | 39561..39776 | - | 216 | Protein_47 | hypothetical protein | - |
| AM464_RS27505 () | 39831..40649 | - | 819 | WP_153069262.1 | conjugal transfer protein TraT | - |
| AM464_RS27510 () | 40564..40815 | - | 252 | WP_001277575.1 | hypothetical protein | - |
| AM464_RS27515 () | 40872..41270 | - | 399 | WP_029391936.1 | hypothetical protein | - |
| AM464_RS27520 () | 41317..41844 | - | 528 | WP_001379391.1 | conjugal transfer protein TraQ | - |
| AM464_RS27525 () | 41844..42557 | - | 714 | WP_000787009.1 | conjugal transfer protein TraP | - |
| AM464_RS27530 () | 42554..43885 | - | 1332 | WP_045145399.1 | conjugal transfer protein TraO | - |
| AM464_RS27535 () | 43889..44863 | - | 975 | WP_021532715.1 | hypothetical protein | VF |
| AM464_RS27540 () | 44874..45569 | - | 696 | WP_106631241.1 | DotI/IcmL family type IV secretion protein | - |
| AM464_RS27545 () | 45581..45931 | - | 351 | WP_001056369.1 | hypothetical protein | - |
| AM464_RS27550 () | 45948..50009 | - | 4062 | WP_106631240.1 | DNA primase | - |
| AM464_RS27555 () | 50073..50363 | - | 291 | WP_000817799.1 | hypothetical protein | - |
| AM464_RS27560 () | 50360..51508 | - | 1149 | WP_058100838.1 | putative protein YggR | VF |
| AM464_RS27565 () | 51492..52328 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| AM464_RS27570 () | 52325..52783 | - | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| AM464_RS27575 () | 52887..54089 | - | 1203 | WP_053287757.1 | conjugal transfer protein TraF | - |
| AM464_RS27580 () | 54191..55012 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| AM464_RS27585 () | 55286..55606 | + | 321 | WP_000695052.1 | hypothetical protein | - |
| AM464_RS27590 () | 55698..55988 | - | 291 | WP_021532709.1 | hypothetical protein | - |
| AM464_RS27595 () | 56030..57199 | - | 1170 | WP_021532708.1 | site-specific integrase | - |
| AM464_RS27605 () | 57536..58813 | - | 1278 | WP_077891451.1 | hypothetical protein | VF |
| AM464_RS27610 () | 58810..59460 | - | 651 | WP_106631246.1 | prepilin peptidase | - |
| AM464_RS27615 () | 59477..59953 | - | 477 | WP_021532704.1 | hypothetical protein | VF |
| AM464_RS27620 () | 60012..60548 | - | 537 | WP_021532703.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| AM464_RS27625 () | 60598..61698 | - | 1101 | WP_072661742.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| AM464_RS27630 () | 61700..63208 | - | 1509 | WP_106631238.1 | Type II secretion system protein E | VF |
| AM464_RS27635 () | 63305..63901 | - | 597 | WP_021547655.1 | hypothetical protein | - |
| AM464_RS27640 () | 63997..64551 | - | 555 | WP_021532699.1 | hypothetical protein | - |
| AM464_RS27645 () | 64600..65052 | - | 453 | WP_021532698.1 | hypothetical protein | VF |
| AM464_RS27650 () | 65042..66337 | - | 1296 | WP_106631237.1 | type 4b pilus protein PilO2 | - |
| AM464_RS27655 () | 66358..67977 | - | 1620 | WP_021532696.1 | Outer membrane lipoprotein BfpB | VF |
| AM464_RS27660 () | 68008..68445 | - | 438 | WP_106631236.1 | type IV pilus biogenesis protein PilM | - |
| AM464_RS27665 () | 68450..69520 | - | 1071 | WP_021532694.1 | hypothetical protein | VF |
| AM464_RS27675 () | 70234..70551 | - | 318 | WP_086795421.1 | PilI type IV pilus biogenesis protein | - |
| AM464_RS27680 () | 70557..72251 | - | 1695 | WP_110844349.1 | flotillin family protein | - |
| AM464_RS27685 () | 72278..72703 | - | 426 | Protein_82 | DUF1449 family protein | - |
| AM464_RS27700 () | 74034..74234 | - | 201 | Protein_84 | DUF1449 family protein | - |
| AM464_RS27710 () | 74501..75166 | - | 666 | WP_000154146.1 | hypothetical protein | - |
| AM464_RS27715 () | 75307..75948 | - | 642 | WP_021547665.1 | hypothetical protein | - |
| AM464_RS27735 () | 76644..77516 | + | 873 | WP_181869882.1 | incFII family plasmid replication initiator RepA | - |
| AM464_RS30100 () | 78207..78374 | + | 168 | WP_065898644.1 | hypothetical protein | - |
| AM464_RS27755 () | 78461..78712 | + | 252 | WP_045145550.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AM464_RS27760 () | 78709..78996 | + | 288 | WP_032353555.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AM464_RS30105 () | 79006..79293 | + | 288 | WP_045145547.1 | hypothetical protein | - |
| AM464_RS27775 () | 80453..80899 | + | 447 | WP_021560313.1 | Serine acetyltransferase | VF |
| AM464_RS27780 () | 81179..81772 | - | 594 | WP_032353553.1 | proQ/FINO family protein | - |
| AM464_RS27800 () | 82626..83813 | - | 1188 | WP_045145541.1 | IS91 family transposase ISEc37 | Transposase |
| AM464_RS27805 () | 83813..84178 | - | 366 | WP_032353961.1 | hypothetical protein | - |
| AM464_RS27815 () | 84269..84544 | + | 276 | Protein_96 | protein McbF | - |
| AM464_RS27820 () | 84588..85151 | + | 564 | WP_032353959.1 | pentapeptide repeat-containing protein | - |
| AM464_RS27825 () | 85352..86077 | - | 726 | Protein_98 | IS256 family transposase IS1414 | Transposase |
| AM464_RS27830 () | 86213..86518 | + | 306 | Protein_99 | IS3 family transposase ISEcB1 | Transposase |
| AM464_RS27845 () | 88336..88752 | - | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AM464_RS27850 () | 88749..88979 | - | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AM464_RS27855 () | 89164..90651 | + | 1488 | Protein_103 | IncI1-type relaxase NikB | - |
| AM464_RS27860 () | 91110..91778 | + | 669 | WP_032353458.1 | cysteine hydrolase | - |
| AM464_RS27865 () | 91784..92644 | + | 861 | WP_001442105.1 | DUF2877 domain-containing protein | - |
| AM464_RS27870 () | 92739..94298 | + | 1560 | WP_000865634.1 | acyl-CoA synthetase FdrA | - |
| AM464_RS27875 () | 94295..95719 | + | 1425 | WP_053287902.1 | DUF1116 domain-containing protein | - |
| AM464_RS27880 () | 95712..96668 | + | 957 | WP_032353537.1 | carbamate kinase | - |
| AM464_RS27885 () | 96685..97074 | + | 390 | WP_001696803.1 | hypothetical protein | - |
| AM464_RS27890 () | 97097..98320 | + | 1224 | WP_024188138.1 | cytosine permease | - |
| AM464_RS27895 () | 98398..99288 | + | 891 | WP_000470711.1 | putative HTH-type transcriptional regulator YahB | VF |
| AM464_RS27900 () | 99722..100111 | + | 390 | WP_032354229.1 | cytochrome B562 | - |
| AM464_RS27910 () | 100342..101039 | + | 698 | Protein_113 | IS1 family transposase | - |
| AM464_RS27915 () | 101221..102084 | + | 864 | WP_021534910.1 | endonuclease/exonuclease/phosphatase family protein | - |
| AM464_RS27925 () | 102344..102523 | - | 180 | WP_077250632.1 | Hin recombinase | - |
| AM464_RS27930 () | 102554..103251 | - | 698 | Protein_116 | IS1 family transposase | - |
| AM464_RS27940 () | 103315..103482 | + | 168 | Protein_117 | bacteriocin immunity protein | - |
| AM464_RS27945 () | 103560..104747 | - | 1188 | WP_160377741.1 | MFS transporter | - |
| AM464_RS27950 () | 104804..105565 | - | 762 | WP_000020503.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| AM464_RS27955 () | 105565..106602 | - | 1038 | WP_032353476.1 | Fe(3+) dicitrate transport system permease protein FecD | VF |
| AM464_RS27960 () | 106602..107600 | - | 999 | WP_032353474.1 | ABC transporter substrate-binding protein | - |
| AM464_RS27965 () | 107750..107908 | - | 159 | Protein_122 | integrase core domain-containing protein | - |
| AM464_RS27970 () | 108186..109190 | - | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| AM464_RS27975 () | 109282..109872 | - | 591 | WP_000086536.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| AM464_RS27985 () | 110373..110657 | + | 285 | WP_106631289.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| AM464_RS27990 () | 110657..110932 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AM464_RS27995 () | 111071..112608 | - | 1538 | Protein_127 | IS66 family transposase ISEc8 | Transposase |
| AM464_RS28000 () | 112658..113005 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| AM464_RS28005 () | 113002..113382 | - | 381 | WP_110844351.1 | IS66 family transposase ISEc8 | Transposase |
| AM464_RS28010 () | 113490..114216 | + | 727 | Protein_130 | IS256 family transposase IS1414 | Transposase |
| AM464_RS28015 () | 114270..115628 | - | 1359 | WP_032353707.1 | esterase-like activity of phytase family protein | - |
| AM464_RS28020 () | 116149..116739 | - | 591 | WP_032353705.1 | hypothetical protein | - |
| AM464_RS30365 () | 116736..116996 | - | 261 | WP_032353703.1 | hypothetical protein | - |
| AM464_RS28030 () | 117034..118247 | + | 1214 | WP_164473236.1 | IS3 family transposase IS629 | Transposase |
| AM464_RS28035 () | 118638..119090 | + | 453 | WP_032353631.1 | N-acetyltransferase | - |
| AM464_RS28040 () | 119122..119307 | - | 186 | WP_032353630.1 | hypothetical protein | - |
| AM464_RS28045 () | 119355..119486 | - | 132 | Protein_137 | IS3 family transposase ISSfl10 | Transposase |
| AM464_RS28055 () | 120468..120686 | + | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AM464_RS28060 () | 120688..120993 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AM464_RS28065 () | 120994..121803 | + | 810 | WP_045145707.1 | site-specific integrase | - |
| AM464_RS28070 () | 121976..122329 | + | 354 | WP_000864812.1 | colicin M immunity protein | - |
| AM464_RS28075 () | 122379..123194 | - | 816 | WP_000449473.1 | lipid II-degrading bacteriocin colicin M | - |
| AM464_RS28085 () | 123318..124526 | + | 1209 | WP_064149665.1 | IS256 family transposase IS1414 | Transposase |
| AM464_RS28095 () | 124759..125286 | + | 528 | WP_032353548.1 | colicin B immunity protein | - |
| AM464_RS28100 () | 125304..125963 | - | 660 | Protein_145 | colicin-B | - |
| AM464_RS28110 () | 126024..126721 | + | 698 | Protein_146 | IS1 family transposase | - |
| AM464_RS28115 () | 126738..127616 | - | 879 | Protein_147 | colicin-B | - |
| AM464_RS28120 () | 127793..128290 | + | 498 | WP_072157241.1 | IS91 family transposase ISSod25 | Transposase |
| AM464_RS28125 () | 128427..128702 | - | 276 | WP_001536593.1 | hypothetical protein | - |
| AM464_RS28130 () | 128696..129340 | - | 645 | WP_000633911.1 | AAA family ATPase | - |
| AM464_RS28135 () | 129569..130540 | + | 972 | WP_021580010.1 | stable plasmid inheritance protein | - |
| AM464_RS28140 () | 130545..130937 | + | 393 | WP_000340830.1 | plasmid partitioning/stability family protein | - |
| AM464_RS28145 () | 130942..132213 | - | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| AM464_RS28150 () | 132213..132650 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AM464_RS28155 () | 132647..132895 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| AM464_RS28165 () | 133313..134215 | + | 903 | WP_139244410.1 | DUF1281 domain-containing protein | - |
| AM464_RS28175 () | 134744..135046 | + | 303 | WP_072770674.1 | antirestriction protein | - |
| AM464_RS28180 () | 135093..135512 | + | 420 | WP_000271736.1 | DUF1380 family protein | - |
| AM464_RS28185 () | 135512..135703 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| AM464_RS30370 () | 136036..136104 | - | 69 | Protein_160 | pilus protein | - |
| AM464_RS28200 () | 136473..137000 | + | 528 | WP_029391983.1 | single-stranded DNA-binding protein | - |
| AM464_RS28205 () | 137058..137291 | + | 234 | WP_021534894.1 | DUF905 domain-containing protein | - |
| AM464_RS28210 () | 137355..139313 | + | 1959 | WP_110844350.1 | ParB/RepB/Spo0J family partition protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|