MGE detailed information
MGE type: Conjugative plasmid MGE length: 118863 bp
Accession: NZ_CP027375 Location: 1..118863 Organism: Escherichia coli strain 05-3629 Replicon: plasmid unnamed2
Accession: NZ_CP027375 Location: 1..118863 Organism: Escherichia coli strain 05-3629 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6P66_RS26035 () | 678..935 | - | 258 | WP_024213663.1 | conjugal transfer protein TrbE | - |
| C6P66_RS26040 () | 949..2778 | - | 1830 | WP_038812163.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| C6P66_RS26045 () | 3088..3468 | - | 381 | WP_024213661.1 | hypothetical protein | - |
| C6P66_RS26050 () | 3465..4103 | - | 639 | WP_024213660.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| C6P66_RS26055 () | 4332..4665 | - | 334 | Protein_5 | hypothetical protein | - |
| C6P66_RS26060 () | 4692..5684 | - | 993 | WP_000817328.1 | conjugal transfer pilus assembly protein TraU | - |
| C6P66_RS26065 () | 5681..6313 | - | 633 | WP_000877291.1 | type-F conjugative transfer system protein TraW | - |
| C6P66_RS26070 () | 6310..6696 | - | 387 | WP_000214090.1 | type-F conjugative transfer system protein TrbI | - |
| C6P66_RS26075 () | 6693..9323 | - | 2631 | WP_024213658.1 | type IV secretion system protein TraC | - |
| C6P66_RS27055 () | 9448..9795 | - | 348 | WP_000836684.1 | hypothetical protein | - |
| C6P66_RS26090 () | 10121..10594 | - | 474 | Protein_11 | hypothetical protein | - |
| C6P66_RS26095 () | 10605..11000 | - | 396 | WP_000549593.1 | hypothetical protein | - |
| C6P66_RS26100 () | 10993..11214 | - | 222 | WP_001278977.1 | conjugal transfer protein TraR | - |
| C6P66_RS26105 () | 11349..11864 | - | 516 | WP_024213657.1 | type IV conjugative transfer system lipoprotein TraV | - |
| C6P66_RS26110 () | 11861..12112 | - | 252 | WP_001038336.1 | conjugal transfer protein TrbG | - |
| C6P66_RS26115 () | 12105..12425 | - | 321 | WP_024214338.1 | conjugal transfer protein TrbD | - |
| C6P66_RS26120 () | 12412..12999 | - | 588 | WP_000002895.1 | conjugal transfer protein TraP | - |
| C6P66_RS26125 () | 12989..14419 | - | 1431 | WP_000146622.1 | conjugal transfer protein TraB | - |
| C6P66_RS26130 () | 14419..15147 | - | 729 | WP_106916398.1 | type-F conjugative transfer system secretin TraK | - |
| C6P66_RS26135 () | 15134..15700 | - | 567 | WP_000399759.1 | type IV conjugative transfer system protein TraE | - |
| C6P66_RS26140 () | 15722..16033 | - | 312 | WP_000012108.1 | type IV conjugative transfer system protein TraL | - |
| C6P66_RS26145 () | 16048..16401 | - | 354 | WP_001098216.1 | type IV conjugative transfer system pilin TraA | - |
| C6P66_RS26150 () | 16436..16663 | - | 228 | WP_000589554.1 | conjugal transfer relaxosome protein TraY | - |
| C6P66_RS26155 () | 16782..17429 | - | 648 | WP_052892413.1 | transcriptional regulator TraJ family protein | - |
| C6P66_RS26160 () | 17623..18006 | - | 384 | WP_001585112.1 | relaxosome protein TraM | - |
| C6P66_RS26165 () | 18327..18929 | + | 603 | WP_106916400.1 | hypothetical protein | VF |
| C6P66_RS26170 () | 19225..20046 | - | 822 | WP_024213651.1 | DUF945 domain-containing protein | - |
| C6P66_RS26175 () | 20165..20452 | - | 288 | WP_000107542.1 | hypothetical protein | - |
| C6P66_RS26185 () | 20608..20910 | - | 303 | WP_024213649.1 | hypothetical protein | - |
| C6P66_RS27185 () | 21213..21510 | + | 298 | Protein_30 | hypothetical protein | - |
| C6P66_RS26205 () | 21811..21972 | - | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 22037..22231 | - | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 22037..22231 | - | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 22037..22231 | - | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 22037..22231 | - | 195 | NuclAT_0 | - | Antitoxin Detail |
| C6P66_RS26210 () | 22180..22494 | - | 315 | Protein_32 | theronine dehydrogenase | - |
| C6P66_RS26215 () | 22491..23210 | - | 720 | WP_001276237.1 | plasmid SOS inhibition protein A | - |
| C6P66_RS26220 () | 23207..23641 | - | 435 | WP_024213646.1 | conjugation system SOS inhibitor PsiB | - |
| C6P66_RS26225 () | 23696..25654 | - | 1959 | WP_052892458.1 | ParB/RepB/Spo0J family partition protein | - |
| C6P66_RS26230 () | 25720..25953 | - | 234 | WP_021564200.1 | DUF905 family protein | - |
| C6P66_RS26235 () | 26011..26544 | - | 534 | WP_024213643.1 | single-stranded DNA-binding protein | - |
| C6P66_RS26255 () | 27027..27383 | + | 357 | WP_077814912.1 | pilus protein | - |
| C6P66_RS26260 () | 27364..27927 | - | 564 | WP_001385677.1 | class I SAM-dependent methyltransferase | - |
| C6P66_RS26265 () | 27973..29334 | - | 1362 | WP_024213835.1 | DUF3560 domain-containing protein | - |
| C6P66_RS26270 () | 29386..29616 | - | 231 | WP_000218649.1 | hypothetical protein | - |
| C6P66_RS26285 () | 30294..30599 | + | 306 | WP_052892427.1 | hypothetical protein | - |
| C6P66_RS26290 () | 30578..30769 | - | 192 | WP_052892425.1 | hypothetical protein | - |
| C6P66_RS26295 () | 30769..31188 | - | 420 | WP_000271736.1 | DUF1380 family protein | - |
| C6P66_RS26300 () | 31235..31537 | - | 303 | WP_001364029.1 | antirestriction protein | - |
| C6P66_RS27065 () | 32076..32846 | - | 771 | WP_052892426.1 | hypothetical protein | - |
| C6P66_RS26315 () | 32891..33325 | - | 435 | WP_000274419.1 | DUF1380 family protein | - |
| C6P66_RS26320 () | 33339..33560 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| C6P66_RS26325 () | 33561..34214 | - | 654 | WP_000769464.1 | DNA methylase | - |
| C6P66_RS26330 () | 34794..36494 | + | 1701 | WP_000125552.1 | group II intron reverse transcriptase/maturase | - |
| C6P66_RS26335 () | 36724..37036 | - | 313 | Protein_51 | hypothetical protein | - |
| C6P66_RS26340 () | 37033..37935 | - | 903 | WP_106916408.1 | DUF1281 domain-containing protein | - |
| C6P66_RS26345 () | 38211..38459 | + | 249 | WP_000618108.1 | DinI-like family protein | - |
| C6P66_RS26350 () | 38456..38893 | + | 438 | WP_000109074.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C6P66_RS26355 () | 38893..40163 | + | 1271 | Protein_55 | translesion error-prone DNA polymerase V subunit UmuC | - |
| C6P66_RS26365 () | 40168..40560 | - | 393 | WP_000340836.1 | plasmid partitioning/stability family protein | - |
| C6P66_RS26370 () | 40565..41536 | - | 972 | WP_001103695.1 | hypothetical protein | - |
| C6P66_RS26375 () | 41765..42409 | + | 645 | WP_000633912.1 | AAA family ATPase | - |
| C6P66_RS26380 () | 42403..42678 | + | 276 | WP_000239527.1 | hypothetical protein | - |
| C6P66_RS26385 () | 42816..43625 | - | 810 | WP_052892429.1 | site-specific integrase | - |
| C6P66_RS26390 () | 43626..43931 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| C6P66_RS26395 () | 43933..44151 | - | 219 | WP_000813639.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| C6P66_RS26400 () | 44747..44995 | + | 249 | WP_052892430.1 | hypothetical protein | - |
| C6P66_RS26405 () | 44992..45582 | + | 591 | WP_052892431.1 | hypothetical protein | - |
| C6P66_RS26410 () | 45600..45947 | - | 348 | WP_000142427.1 | hypothetical protein | - |
| C6P66_RS26420 () | 46430..46801 | - | 372 | WP_052892432.1 | colicin | - |
| C6P66_RS26425 () | 46861..47592 | - | 732 | WP_000850414.1 | complement resistance protein TraT | - |
| C6P66_RS26435 () | 47864..47974 | - | 111 | Protein_68 | IS481 family transposase | - |
| C6P66_RS26450 () | 48758..49735 | + | 978 | WP_011310114.1 | RepB family plasmid replication initiator protein | - |
| C6P66_RS26455 () | 50020..50730 | - | 711 | Protein_70 | tyrosine-type recombinase/integrase | - |
| C6P66_RS26460 () | 50784..52010 | - | 1227 | Protein_71 | ISL3 family transposase | - |
| C6P66_RS26465 () | 52167..52397 | - | 231 | WP_072127350.1 | serine/threonine protein kinase | - |
| C6P66_RS26475 () | 52527..53021 | - | 495 | WP_024213727.1 | Transcriptional repressor MprA | VF |
| C6P66_RS26480 () | 53142..54581 | - | 1440 | WP_001213534.1 | Hemolysin secretion protein D, chromosomal | VF |
| C6P66_RS26485 () | 54585..56705 | - | 2121 | WP_072094473.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| C6P66_RS26490 () | 56755..59751 | - | 2997 | WP_032489272.1 | Hemolysin, chromosomal | VF |
| C6P66_RS26495 () | 59753..60268 | - | 516 | WP_001365635.1 | RTX-I toxin-activating lysine-acyltransferase ApxIC | VF |
| C6P66_RS26505 () | 60696..61499 | - | 804 | WP_052892433.1 | Outer membrane protein A | VF |
| C6P66_RS26510 () | 61524..65864 | - | 4341 | WP_052892434.1 | Autotransporter adhesin SadA | VF |
| C6P66_RS26515 () | 65877..66167 | - | 291 | WP_072127352.1 | Major pilu subunit operon regulatory protein PapB | VF |
| C6P66_RS27190 () | 66885..67047 | + | 163 | Protein_81 | IS91 family transposase | - |
| C6P66_RS26525 () | 67271..68418 | + | 1148 | Protein_82 | IS3 family transposase | - |
| C6P66_RS26530 () | 68444..68763 | - | 320 | Protein_83 | IS91 family transposase ISEc37 | Transposase |
| C6P66_RS26535 () | 69051..69473 | + | 423 | WP_001212725.1 | Exc2 family lipoprotein | - |
| C6P66_RS26540 () | 69734..71821 | - | 2088 | WP_001223214.1 | bifunctional siderophore receptor/adhesin Iha | - |
| C6P66_RS26550 () | 72129..72308 | - | 180 | Protein_86 | integrase core domain-containing protein | - |
| C6P66_RS26555 () | 72653..73801 | - | 1149 | Protein_87 | IS3 family transposase | - |
| C6P66_RS27195 () | 73868..73957 | - | 90 | Protein_88 | transposase | - |
| C6P66_RS26560 () | 74211..75815 | + | 1605 | WP_159032336.1 | Adhesin YadA | VF |
| C6P66_RS27070 () | 76081..76230 | + | 150 | WP_000539306.1 | hypothetical protein | - |
| C6P66_RS26565 () | 76313..77461 | + | 1149 | Protein_91 | IS3 family transposase | - |
| C6P66_RS26570 () | 77519..77839 | + | 321 | WP_000220092.1 | hypothetical protein | - |
| C6P66_RS26585 () | 78329..79006 | - | 678 | WP_001158025.1 | hypothetical protein | - |
| C6P66_RS26590 () | 79165..79551 | + | 387 | WP_052892435.1 | thermonuclease family protein | - |
| C6P66_RS26595 () | 80048..83950 | + | 3903 | WP_047091594.1 | Serine protease EspP | VF |
| C6P66_RS26600 () | 84112..84321 | - | 210 | WP_062896385.1 | hypothetical protein | - |
| C6P66_RS26610 () | 84455..84820 | + | 366 | WP_000997727.1 | hypothetical protein | - |
| C6P66_RS26615 () | 84830..85021 | + | 192 | WP_000264906.1 | hypothetical protein | - |
| C6P66_RS26620 () | 85049..85360 | + | 312 | WP_000204186.1 | hypothetical protein | - |
| C6P66_RS26625 () | 85476..85940 | + | 465 | WP_077629759.1 | IS3 family transposase ISKpn8 | Transposase |
| C6P66_RS26630 () | 86008..86244 | + | 237 | WP_001369996.1 | hypothetical protein | - |
| C6P66_RS26635 () | 86285..86983 | - | 699 | WP_000431492.1 | lactate utilization protein C | - |
| C6P66_RS26640 () | 86988..88403 | - | 1416 | WP_000054160.1 | iron-sulfur cluster-binding protein | - |
| C6P66_RS26645 () | 88414..89133 | - | 720 | WP_001102093.1 | (Fe-S)-binding protein | - |
| C6P66_RS26650 () | 89184..90740 | - | 1557 | WP_052892436.1 | L-lactate permease | - |
| C6P66_RS26655 () | 91843..92124 | + | 282 | WP_077814914.1 | Major pilu subunit operon regulatory protein PapB | VF |
| C6P66_RS26660 () | 92140..93456 | + | 1317 | WP_106916402.1 | Autotransporter adhesin UpaG | VF |
| C6P66_RS26675 () | 95153..95392 | - | 240 | WP_001365702.1 | MarR family transcriptional regulator | - |
| C6P66_RS26680 () | 95405..95665 | - | 261 | WP_072127342.1 | hypothetical protein | - |
| C6P66_RS26695 () | 96368..97225 | - | 858 | WP_052892418.1 | incFII family plasmid replication initiator RepA | - |
| C6P66_RS26700 () | 97218..97292 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| C6P66_RS26710 () | 97527..97784 | - | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| C6P66_RS26715 () | 98068..98217 | - | 150 | WP_001336447.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 98265..98321 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 98265..98321 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 98265..98321 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - () | 98265..98321 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| C6P66_RS26730 () | 98981..99442 | - | 462 | WP_000760084.1 | thermonuclease family protein | - |
| C6P66_RS26740 () | 100538..101095 | - | 558 | WP_024213676.1 | fertility inhibition protein FinO | - |
| C6P66_RS26745 () | 101131..101499 | - | 369 | WP_052892417.1 | NirD/YgiW/YdeI family stress tolerance protein | - |
| C6P66_RS26750 () | 101582..102328 | - | 747 | WP_052892416.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| C6P66_RS26755 () | 102348..107618 | - | 5271 | WP_052892415.1 | Multifunctional conjugation protein TraI | Relaxase |
| C6P66_RS26760 () | 107618..109933 | - | 2316 | WP_106916406.1 | Coupling protein TraD | VF |
| C6P66_RS26765 () | 110215..110694 | - | 480 | WP_001473214.1 | hypothetical protein | - |
| C6P66_RS26770 () | 110898..111629 | - | 732 | WP_033800894.1 | complement resistance protein TraT | - |
| C6P66_RS26775 () | 111661..112164 | - | 504 | WP_077637628.1 | surface exclusion protein | - |
| C6P66_RS26780 () | 112180..115002 | - | 2823 | WP_024213669.1 | conjugal transfer mating pair stabilization protein TraG | - |
| C6P66_RS26785 () | 114999..116372 | - | 1374 | WP_024213668.1 | conjugal transfer protein TraH | - |
| C6P66_RS26790 () | 116359..116784 | - | 426 | WP_071600111.1 | F-type conjugal transfer protein TrbF | - |
| C6P66_RS26795 () | 116732..117079 | - | 348 | WP_071531747.1 | P-type conjugative transfer protein TrbJ | - |
| C6P66_RS26800 () | 117009..117554 | - | 546 | WP_001477377.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| C6P66_RS26805 () | 117541..117828 | - | 288 | WP_000335419.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| C6P66_RS26810 () | 117894..118340 | - | 447 | WP_077637625.1 | hypothetical protein | - |
| C6P66_RS26815 () | 118426..118791 | - | 366 | WP_024213665.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|