MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 31764 bp
Accession: NZ_CP026942 Location: 1..31764 Organism: Escherichia coli strain CFS3313 Replicon: plasmid pCFS3313-3
Accession: NZ_CP026942 Location: 1..31764 Organism: Escherichia coli strain CFS3313 Replicon: plasmid pCFS3313-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5F74_RS25015 () | 7..873 | + | 867 | WP_001353743.1 | replication initiation protein | - |
| C5F74_RS25020 () | 886..1290 | + | 405 | WP_012421203.1 | hypothetical protein | - |
| C5F74_RS25025 () | 1425..1952 | + | 528 | WP_000577043.1 | DUF2726 domain-containing protein | - |
| C5F74_RS25030 () | 2536..2787 | - | 252 | WP_000928750.1 | hypothetical protein | - |
| C5F74_RS25035 () | 2823..3125 | - | 303 | WP_001096507.1 | hypothetical protein | - |
| C5F74_RS25040 () | 3219..3878 | - | 660 | WP_000516222.1 | hypothetical protein | VF |
| C5F74_RS25045 () | 3983..4807 | - | 825 | WP_001353741.1 | Tyrosine recombinase XerD | VF |
| C5F74_RS25050 () | 5363..6019 | - | 657 | WP_000972912.1 | hypothetical protein | - |
| C5F74_RS25055 () | 6123..6587 | - | 465 | WP_001293141.1 | H-NS histone family protein | - |
| C5F74_RS25060 () | 6605..6811 | - | 207 | WP_000850856.1 | hemolysin expression modulator Hha | - |
| C5F74_RS25065 () | 6808..8961 | - | 2154 | WP_001235750.1 | type IA DNA topoisomerase | - |
| C5F74_RS25070 () | 8966..9541 | - | 576 | WP_001199074.1 | hypothetical protein | - |
| C5F74_RS25075 () | 9647..10051 | - | 405 | WP_001218543.1 | hypothetical protein | - |
| C5F74_RS25080 () | 10067..10561 | - | 495 | WP_001215680.1 | thermonuclease family protein | - |
| C5F74_RS25085 () | 10558..10866 | - | 309 | WP_000647576.1 | hypothetical protein | - |
| C5F74_RS25090 () | 10969..11223 | - | 255 | WP_000415096.1 | hypothetical protein | - |
| C5F74_RS25095 () | 11229..11534 | - | 306 | WP_000147044.1 | IncN plasmid KikA protein | - |
| C5F74_RS25100 () | 11518..11937 | - | 420 | WP_000737411.1 | hypothetical protein | - |
| C5F74_RS25105 () | 11949..13811 | - | 1863 | WP_000847106.1 | type IV secretory system conjugative DNA transfer family protein | - |
| C5F74_RS25110 () | 13798..14826 | - | 1029 | WP_000017226.1 | Type IV secretion system protein VirB11 | VF |
| C5F74_RS25115 () | 14828..15946 | - | 1119 | WP_000131271.1 | Type IV secretion system protein virB10 | VF |
| C5F74_RS25120 () | 15939..16847 | - | 909 | WP_001329500.1 | Type IV secretion system protein virB9 | VF |
| C5F74_RS25125 () | 16844..17530 | - | 687 | WP_001290765.1 | Type IV secretion system protein virB8 | VF |
| C5F74_RS25130 () | 18045..19139 | - | 1095 | WP_000046889.1 | type IV secretion system protein | - |
| C5F74_RS25135 () | 19151..19867 | - | 717 | WP_000832283.1 | type IV secretion system VirB5 protein | - |
| C5F74_RS25140 () | 19879..22626 | - | 2748 | WP_000105985.1 | Type IV secretion system protein virB4 | VF |
| C5F74_RS25145 () | 22645..22917 | - | 273 | WP_001328551.1 | Type IV secretion system protein virB2 | VF |
| C5F74_RS25150 () | 22985..23605 | - | 621 | WP_000157549.1 | Type IV secretion system protein virB1 | VF |
| C5F74_RS25155 () | 23962..24177 | - | 216 | WP_000760375.1 | EexN family lipoprotein | - |
| C5F74_RS25160 () | 24174..24467 | - | 294 | WP_000134733.1 | LuxR family transcriptional regulator | - |
| C5F74_RS25165 () | 24544..25773 | - | 1230 | WP_001329504.1 | hypothetical protein | Relaxase |
| C5F74_RS25170 () | 25777..26280 | - | 504 | WP_000781813.1 | hypothetical protein | - |
| C5F74_RS25175 () | 26641..26988 | - | 348 | WP_000681613.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| C5F74_RS25180 () | 26985..27233 | - | 249 | WP_000520549.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| C5F74_RS25185 () | 27538..27888 | - | 351 | WP_000854259.1 | hypothetical protein | - |
| C5F74_RS25190 () | 27979..28278 | - | 300 | WP_000650309.1 | hypothetical protein | - |
| C5F74_RS25195 () | 28732..28959 | - | 228 | WP_000801440.1 | hypothetical protein | - |
| C5F74_RS25200 () | 28946..29197 | - | 252 | WP_001230707.1 | hypothetical protein | - |
| C5F74_RS25205 () | 29194..29736 | - | 543 | WP_001083906.1 | hypothetical protein | - |
| C5F74_RS25210 () | 29841..30356 | - | 516 | WP_001025395.1 | J domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli strain JIE143 transconjugant Tx143 | Non-Mobilizable plasmid | TA10150, TA10151, TA20092 | JN194214 | 1..34345 | 0.004 |