MGE detailed information
MGE type: Conjugative plasmid MGE length: 111813 bp
Accession: NZ_CP026941 Location: 1..111813 Organism: Escherichia coli strain CFS3313 Replicon: plasmid pCFS3313-2
Accession: NZ_CP026941 Location: 1..111813 Organism: Escherichia coli strain CFS3313 Replicon: plasmid pCFS3313-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5F74_RS24390 () | 162..1193 | + | 1032 | WP_000907870.1 | replication initiation protein | - |
| C5F74_RS25310 () | 1889..2101 | + | 213 | WP_021265676.1 | hypothetical protein | - |
| C5F74_RS24395 () | 2216..3424 | - | 1209 | WP_000198533.1 | IS91 family transposase | - |
| C5F74_RS24400 () | 3405..3677 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| C5F74_RS24405 () | 3754..4953 | - | 1200 | Protein_4 | Tn3-like element TnAs1 family transposase | - |
| C5F74_RS24410 () | 4957..5349 | + | 393 | WP_001351729.1 | cysteine hydrolase | - |
| C5F74_RS24415 () | 5487..6371 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| C5F74_RS24420 () | 6403..7602 | - | 1200 | WP_000804064.1 | tetracycline efflux MFS transporter Tet(A) | - |
| C5F74_RS24425 () | 7708..8358 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| C5F74_RS24430 () | 8390..8578 | - | 189 | WP_001191969.1 | hypothetical protein | - |
| C5F74_RS24435 () | 8585..9001 | - | 417 | WP_080861963.1 | recombinase family protein | - |
| C5F74_RS24440 () | 9060..9764 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| C5F74_RS24445 () | 9817..10572 | + | 756 | Protein_12 | IS110-like element IS5075 family transposase | - |
| C5F74_RS24450 () | 10754..10930 | - | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| C5F74_RS24455 () | 11159..11236 | - | 78 | Protein_14 | transcriptional regulator | - |
| C5F74_RS24460 () | 11260..12075 | + | 816 | WP_001043260.1 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| C5F74_RS24465 () | 12162..12464 | + | 303 | WP_000251875.1 | phosphoglucosamine mutase | - |
| C5F74_RS24470 () | 12358..12609 | - | 252 | WP_001445143.1 | hypothetical protein | - |
| C5F74_RS24475 () | 12640..13776 | - | 1137 | WP_023140202.1 | IS91 family transposase | - |
| C5F74_RS24480 () | 14143..14412 | + | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| C5F74_RS24485 () | 14409..14690 | + | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| C5F74_RS24490 () | 14730..15578 | + | 849 | WP_021265674.1 | 3'-5' exonuclease | - |
| C5F74_RS24495 () | 15695..16168 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| C5F74_RS24500 () | 16911..17405 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| C5F74_RS24505 () | 17461..18063 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| C5F74_RS24515 () | 19753..21099 | + | 1347 | WP_001132032.1 | hypothetical protein | - |
| C5F74_RS24520 () | 21378..23258 | + | 1881 | WP_001283341.1 | colicin 1B | - |
| C5F74_RS24525 () | 23276..23623 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| C5F74_RS24530 () | 23742..24090 | + | 349 | Protein_29 | hypothetical protein | - |
| C5F74_RS24535 () | 24110..24700 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| C5F74_RS24540 () | 24700..24957 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| C5F74_RS24545 () | 25308..26309 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| C5F74_RS24550 () | 26485..26829 | - | 345 | WP_025653526.1 | hypothetical protein | - |
| C5F74_RS24555 () | 27328..27582 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| C5F74_RS24560 () | 27627..28553 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| C5F74_RS24565 () | 29174..29458 | + | 285 | WP_001331078.1 | hypothetical protein | - |
| C5F74_RS24570 () | 29451..30140 | + | 690 | WP_000796232.1 | hypothetical protein | - |
| C5F74_RS24575 () | 30137..30925 | + | 789 | WP_000016498.1 | site-specific integrase | - |
| C5F74_RS24580 () | 31105..31749 | + | 645 | WP_001144036.1 | ParA family protein | - |
| C5F74_RS24585 () | 31836..32144 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| C5F74_RS24590 () | 32558..33538 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| C5F74_RS24595 () | 33531..33947 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| C5F74_RS24600 () | 33949..35223 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| C5F74_RS24605 () | 35223..35660 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| C5F74_RS24610 () | 35657..35905 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| C5F74_RS24615 () | 36254..37225 | + | 972 | WP_077250494.1 | DUF1281 domain-containing protein | - |
| C5F74_RS24620 () | 37222..37533 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| C5F74_RS24625 () | 37610..38293 | + | 684 | WP_000086178.1 | DNA methylase | - |
| C5F74_RS24630 () | 38294..38515 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| C5F74_RS24635 () | 38527..38961 | + | 435 | WP_000274403.1 | DUF1380 family protein | - |
| C5F74_RS24640 () | 38961..39770 | + | 810 | Protein_51 | hypothetical protein | - |
| C5F74_RS24645 () | 39655..40227 | + | 573 | WP_015059345.1 | YubH family protein | - |
| C5F74_RS24650 () | 40323..40625 | + | 303 | WP_072132163.1 | antirestriction protein | - |
| C5F74_RS24655 () | 40672..41094 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| C5F74_RS24660 () | 41091..41282 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| C5F74_RS24665 () | 41560..43227 | - | 1668 | WP_001762494.1 | group II intron reverse transcriptase/maturase | - |
| C5F74_RS24670 () | 44000..44385 | - | 386 | Protein_57 | hypothetical protein | - |
| C5F74_RS24675 () | 44395..44922 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| C5F74_RS24680 () | 44980..45213 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| C5F74_RS24685 () | 45272..47230 | + | 1959 | WP_021265661.1 | ParB/RepB/Spo0J family partition protein | - |
| C5F74_RS24690 () | 47285..47719 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| C5F74_RS24695 () | 47716..48435 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| C5F74_RS24700 () | 48432..49028 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| C5F74_RS24705 () | 49100..49570 | + | 471 | WP_001347396.1 | YubH family protein | - |
| C5F74_RS24710 () | 49491..49991 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| C5F74_RS24715 () | 50720..51154 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| C5F74_RS24720 () | 51246..51512 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| C5F74_RS24725 () | 51577..52518 | + | 942 | WP_000038339.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| C5F74_RS25315 () | 52580..52750 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| C5F74_RS24730 () | 52781..53032 | - | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| C5F74_RS24735 () | 53612..54460 | + | 849 | WP_025653527.1 | DUF4942 domain-containing protein | - |
| C5F74_RS24740 () | 54545..54880 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| C5F74_RS24745 () | 55114..55446 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| C5F74_RS24750 () | 55457..58156 | + | 2700 | WP_024143648.1 | IncI1-type relaxase NikB | - |
| C5F74_RS24755 () | 58193..60484 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| C5F74_RS24760 () | 60477..61547 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| C5F74_RS24765 () | 61566..62774 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 62954..63011 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 62954..63011 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 62954..63011 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 62954..63011 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| C5F74_RS24770 () | 63066..63218 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| C5F74_RS24775 () | 63290..63541 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| C5F74_RS25320 () | 64200..64376 | - | 177 | WP_001054904.1 | hypothetical protein | - |
| C5F74_RS24780 () | 64768..64977 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| C5F74_RS24785 () | 65049..65699 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| C5F74_RS24790 () | 65773..67941 | - | 2169 | WP_021537350.1 | DotA/TraY family protein | - |
| C5F74_RS24795 () | 68038..68622 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| C5F74_RS24800 () | 68651..69853 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| C5F74_RS24805 () | 69820..70434 | - | 615 | WP_000337398.1 | IncI1-type conjugal transfer protein TraV | - |
| C5F74_RS24810 () | 70434..73478 | - | 3045 | WP_021265678.1 | IncI1-type conjugal transfer protein TraU | - |
| C5F74_RS24815 () | 73568..74368 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| C5F74_RS24820 () | 74352..74540 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| C5F74_RS24825 () | 74604..75008 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| C5F74_RS24830 () | 75059..75586 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| C5F74_RS24835 () | 75586..76290 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| C5F74_RS24840 () | 76290..77579 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| C5F74_RS24845 () | 77582..78565 | - | 984 | WP_001191877.1 | IncI1-type conjugal transfer protein TraN | - |
| C5F74_RS24850 () | 78576..79268 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| C5F74_RS24855 () | 79265..79612 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| C5F74_RS24860 () | 79630..83397 | - | 3768 | WP_001141527.1 | DNA primase | - |
| C5F74_RS24865 () | 83486..84037 | - | 552 | WP_000014583.1 | phospholipase D family protein | - |
| C5F74_RS24870 () | 84052..84342 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| C5F74_RS24875 () | 84339..85487 | - | 1149 | WP_001024972.1 | plasmid transfer ATPase TraJ | - |
| C5F74_RS24880 () | 85484..86302 | - | 819 | WP_000646098.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| C5F74_RS24885 () | 86299..86757 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| C5F74_RS24890 () | 87152..87736 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| C5F74_RS24895 () | 87796..88998 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| C5F74_RS24900 () | 89083..89907 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| C5F74_RS24905 () | 90058..91212 | - | 1155 | WP_001139957.1 | integrase | - |
| C5F74_RS24910 () | 91506..92768 | + | 1263 | WP_000608644.1 | IS1380-like element ISEc9 family transposase | - |
| C5F74_RS24915 () | 93056..93931 | + | 876 | WP_013188473.1 | class A extended-spectrum beta-lactamase CTX-M-1 | - |
| C5F74_RS24920 () | 93978..94310 | - | 333 | WP_064754192.1 | WbuC family cupin fold metalloprotein | - |
| C5F74_RS24925 () | 95522..96943 | - | 1422 | Protein_110 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| C5F74_RS24930 () | 96943..97599 | - | 657 | WP_001193553.1 | prepilin peptidase | - |
| C5F74_RS24935 () | 97584..98144 | - | 561 | WP_000014116.1 | lytic transglycosylase domain-containing protein | - |
| C5F74_RS24940 () | 98154..98768 | - | 615 | WP_000959785.1 | pilus assembly protein PilX | - |
| C5F74_RS24945 () | 98786..99883 | - | 1098 | WP_001208805.1 | type II secretion system F family protein | - |
| C5F74_RS24950 () | 99896..101449 | - | 1554 | WP_000362202.1 | Flp pilus assembly complex ATPase component TadA | - |
| C5F74_RS24955 () | 101460..101912 | - | 453 | WP_001247334.1 | type IV pilus biogenesis protein PilP | - |
| C5F74_RS24960 () | 101899..103194 | - | 1296 | WP_000752772.1 | type 4b pilus protein PilO2 | - |
| C5F74_RS24965 () | 103187..104869 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| C5F74_RS24970 () | 104883..105320 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| C5F74_RS24975 () | 105320..106386 | - | 1067 | Protein_120 | type IV pilus biogenesis lipoprotein PilL | - |
| C5F74_RS24980 () | 107010..107306 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| C5F74_RS24985 () | 107482..107736 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| C5F74_RS24990 () | 107898..108449 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| C5F74_RS24995 () | 108622..109305 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| C5F74_RS25000 () | 109559..110092 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| C5F74_RS25005 () | 110534..110770 | - | 237 | WP_000483804.1 | conjugal transfer protein TraA | - |
| C5F74_RS25010 () | 110739..111002 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA6370, TA30448 | NC_023329 | 1..104399 | 0.008 |