NZ_CP0263491631002..1664463

MGE detailed information

MGE type: Prophage        MGE length: 33462 bp
Accession: NZ_CP026349        Location: 1631002..1664463         Organism: Escherichia coli strain 6A       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
C2R14_RS08495 () 1627517..1628263 + 747 WP_000636571.1 bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG -
C2R14_RS08500 () 1628352..1629038 + 687 WP_000215549.1 DNA-binding transcriptional regulator YdfH -
C2R14_RS08505 () 1629215..1629418 + 204 WP_000214712.1 putative selenium delivery protein YdfZ -
C2R14_RS08510 () 1629453..1630913 - 1461 WP_000527743.1 mannitol dehydrogenase family protein -
C2R14_RS08515 () 1631002..1632369 - 1368 Protein_1552 MHS family MFS transporter -
C2R14_RS24160 () 1632890..1633003 + 114 WP_120795384.1 hypothetical protein -
C2R14_RS08520 () 1633072..1633305 + 234 WP_000836768.1 cold shock protein YdfK -
C2R14_RS08525 () 1633622..1634212 + 591 WP_000078177.1 Tn3 family transposase TnpR_ISSba14 Transposase
C2R14_RS08530 () 1634310..1634885 - 576 WP_000885611.1 tail fiber assembly protein -
C2R14_RS08535 () 1634885..1635847 - 963 WP_001027733.1 phage tail protein -
C2R14_RS08540 () 1635798..1636367 - 570 WP_000453612.1 DNA-packaging protein -
C2R14_RS08550 () 1636756..1636989 + 234 WP_001368374.1 YlcI/YnfO family protein -
C2R14_RS08555 () 1637047..1637457 + 411 WP_000373090.1 DUF1398 domain-containing protein -
C2R14_RS08560 () 1637609..1637782 - 174 WP_001019606.1 addiction module toxin, GnsA/GnsB family -
C2R14_RS08565 () 1637954..1638109 - 156 WP_001309517.1 hypothetical protein -
C2R14_RS24165 () 1638188..1638253 - 66 WP_120795388.1 hypothetical protein -
C2R14_RS08570 () 1638256..1638444 - 189 WP_071524604.1 cold-shock protein -
C2R14_RS08575 () 1638455..1638667 - 213 WP_000066495.1 cold shock protein CspI -
C2R14_RS08580 () 1639030..1639527 - 498 WP_001071769.1 DUF2514 domain-containing protein -
C2R14_RS08585 () 1639524..1640057 - 534 WP_001092971.1 lysozyme -
C2R14_RS08590 () 1640054..1640365 - 312 WP_000189916.1 YdfR family protein -
C2R14_RS08595 () 1640370..1640585 - 216 WP_000839590.1 phage lysis protein EssD -
C2R14_RS24445 () 1640805..1640975 + 171 WP_211180497.1 putative zinc-binding protein YnfU -
C2R14_RS08600 () 1641339..1641554 - 216 WP_000066484.1 cold shock-like protein CspB -
C2R14_RS08605 () 1641855..1642067 + 213 WP_000087756.1 cold shock-like protein CspF -
C2R14_RS24170 () 1642122..1642211 + 90 WP_120795389.1 hypothetical protein -
C2R14_RS08610 () 1642489..1643241 - 753 WP_001047135.1 antitermination protein -
C2R14_RS08615 () 1643255..1644304 - 1050 WP_001393597.1 DUF968 domain-containing protein -
C2R14_RS08620 () 1644306..1644584 - 279 WP_012304870.1 hypothetical protein -
C2R14_RS08625 () 1644651..1644902 - 252 WP_000980994.1 hypothetical protein -
C2R14_RS08630 () 1645119..1645274 - 156 WP_000813254.1 type I toxin-antitoxin system toxin HokD -
C2R14_RS08635 () 1645346..1645633 - 288 WP_000323025.1 type II toxin-antitoxin system mRNA interferase RelE Toxin Detail
C2R14_RS08640 () 1645633..1645872 - 240 WP_000534858.1 type II toxin-antitoxin system antitoxin RelB Antitoxin Detail
C2R14_RS08645 () 1645897..1646202 + 306 WP_001326990.1 hypothetical protein -
C2R14_RS08650 () 1646405..1646737 + 333 WP_001301033.1 protein FlxA -
C2R14_RS24175 () 1647174..1647323 - 150 WP_011443592.1 hypothetical protein -
C2R14_RS08660 () 1647358..1647636 - 279 Protein_1584 hypothetical protein -
C2R14_RS08665 () 1647620..1647850 - 231 WP_000920568.1 dicB transcriptional regulator DicC -
C2R14_RS08670 () 1647934..1648341 + 408 WP_000448564.1 DNA-binding transcriptional dual regulator DicA -
C2R14_RS08675 () 1648508..1648663 + 156 WP_000379575.1 DUF1391 family protein -
C2R14_RS08685 () 1648823..1649041 + 219 WP_001171942.1 hypothetical protein -
C2R14_RS08695 () 1649609..1649797 + 189 WP_000854559.1 cell division inhibition protein DicB -
C2R14_RS08700 () 1649794..1649985 + 192 WP_001083297.1 lysis protein YdfD -
C2R14_RS08705 () 1650078..1650845 + 768 Protein_1591 exonuclease -
C2R14_RS08710 () 1650842..1651537 + 696 Protein_1592 IS3 family transposase IS2 Transposase
C2R14_RS08715 () 1651551..1652708 + 1158 Protein_1593 Putative defective protein IntQ ; Integrase Integrase
C2R14_RS08725 () 1652896..1653915 - 1020 WP_000836066.1 Zn-dependent oxidoreductase -
C2R14_RS08730 () 1653927..1655141 - 1215 WP_001295394.1 starvation-sensing protein RspA -
C2R14_RS08740 () 1655347..1655673 - 327 WP_000598292.1 YnfA family protein -
C2R14_RS08745 () 1655808..1656149 + 342 WP_000705211.1 DUF1283 family protein -
C2R14_RS08750 () 1656184..1656744 + 561 WP_001138581.1 spermidine N1-acetyltransferase -
C2R14_RS08755 () 1656747..1657457 - 711 WP_001321287.1 YnfC family lipoprotein -
C2R14_RS08760 () 1657565..1657870 + 306 WP_001300836.1 DUF1161 domain-containing protein -
C2R14_RS08765 () 1658069..1660495 + 2427 WP_000041675.1 dimethyl sulfoxide reductase subunit A -
C2R14_RS08770 () 1660556..1662979 + 2424 WP_001340362.1 dimethyl sulfoxide reductase subunit A -
C2R14_RS08775 () 1662990..1663607 + 618 WP_000213028.1 dimethylsulfoxide reductase subunit B -
C2R14_RS08780 () 1663609..1664463 + 855 WP_000526503.1 dimethyl sulfoxide reductase anchor subunit -
C2R14_RS08785 () 1664506..1665120 + 615 WP_000148710.1 Tat proofreading chaperone DmsD -
C2R14_RS08790 () 1665279..1666571 + 1293 WP_071592181.1 voltage-gated ClC-type chloride channel ClcB -
C2R14_RS08795 () 1666524..1667219 - 696 WP_000919231.1 dethiobiotin synthase -
C2R14_RS08800 () 1667344..1668564 - 1221 WP_000225262.1 DNA-binding transcriptional repressor Mlc -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Escherichia coli str. K-12 substr. MC4100 Prophage TA20067 HG738867 1519531..1552992 0
Escherichia coli str. K-12 substr. MG1655 Prophage TA1041 NC_000913 1631002..1664463 0
Escherichia coli str. K-12 substr. DH10B Prophage TA22686 NC_010473 1718651..1753448 0
Escherichia coli BW2952 Prophage TA23854 NC_012759 1521085..1554546 0
Escherichia coli BW25113 Prophage TA48683 NZ_CP009273 1625259..1658720 0
Escherichia coli str. K-12 substr. MC4100 strain K-12 Prophage TA285017 NZ_HG738867 1519531..1552992 0