MGE detailed information
MGE type: Conjugative plasmid MGE length: 108475 bp
Accession: NZ_CP025857 Location: 1..108475 Organism: Escherichia coli strain 504838 Replicon: plasmid p504838_108
Accession: NZ_CP025857 Location: 1..108475 Organism: Escherichia coli strain 504838 Replicon: plasmid p504838_108
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXV93_RS25400 () | 1..858 | - | 858 | WP_001537577.1 | incFII family plasmid replication initiator RepA | - |
| CXV93_RS25405 () | 851..925 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| CXV93_RS25415 () | 1159..1416 | - | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| CXV93_RS25420 () | 1701..1850 | - | 150 | WP_001336447.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 1898..1954 | + | 57 | NuclAT_2 | - | Antitoxin Detail |
| - () | 1898..1954 | + | 57 | NuclAT_2 | - | Antitoxin Detail |
| - () | 1898..1954 | + | 57 | NuclAT_2 | - | Antitoxin Detail |
| - () | 1898..1954 | + | 57 | NuclAT_2 | - | Antitoxin Detail |
| CXV93_RS25430 () | 2049..2486 | - | 438 | WP_000872609.1 | hypothetical protein | - |
| CXV93_RS25435 () | 2639..3022 | - | 384 | WP_001109264.1 | hypothetical protein | - |
| CXV93_RS25440 () | 3084..3781 | + | 698 | Protein_6 | IS1 family transposase | - |
| CXV93_RS25445 () | 3902..4363 | - | 462 | WP_000760080.1 | thermonuclease family protein | - |
| CXV93_RS25450 () | 5116..5319 | - | 204 | WP_001336517.1 | hypothetical protein | - |
| CXV93_RS25455 () | 5471..6028 | - | 558 | WP_000139329.1 | fertility inhibition protein FinO | - |
| CXV93_RS25460 () | 6083..6829 | - | 747 | WP_000205709.1 | conjugal transfer pilus acetylase TraX | - |
| CXV93_RS25465 () | 6849..7013 | - | 165 | Protein_11 | DNA helicase | - |
| CXV93_RS25470 () | 7186..8394 | - | 1209 | WP_001695118.1 | IS91 family transposase | - |
| CXV93_RS25475 () | 8375..8647 | - | 273 | WP_001695087.1 | hypothetical protein | - |
| CXV93_RS25480 () | 8680..13833 | - | 5154 | WP_126125593.1 | conjugative transfer relaxase/helicase TraI | - |
| CXV93_RS25485 () | 13833..16058 | - | 2226 | WP_016238718.1 | type IV conjugative transfer system coupling protein TraD | - |
| CXV93_RS25490 () | 16109..16846 | - | 738 | WP_000199901.1 | hypothetical protein | - |
| CXV93_RS25495 () | 16879..18450 | - | 1572 | WP_001743889.1 | IS66 family transposase | - |
| CXV93_RS25500 () | 18470..18817 | - | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CXV93_RS25505 () | 18817..19494 | - | 678 | WP_001339397.1 | IS66 family insertion sequence hypothetical protein | - |
| CXV93_RS25515 () | 19756..20487 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| CXV93_RS25520 () | 20519..21016 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| CXV93_RS25525 () | 21035..23854 | - | 2820 | WP_001537571.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CXV93_RS25530 () | 23851..25224 | - | 1374 | WP_126125594.1 | conjugal transfer protein TraH | - |
| CXV93_RS25535 () | 25211..25636 | - | 426 | WP_001336804.1 | F-type conjugal transfer protein TrbF | - |
| CXV93_RS25540 () | 25557..25931 | - | 375 | WP_071586940.1 | P-type conjugative transfer protein TrbJ | - |
| CXV93_RS25545 () | 25861..26406 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CXV93_RS25550 () | 26393..26677 | - | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CXV93_RS25560 () | 27074..27415 | - | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| CXV93_RS25565 () | 27429..28172 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CXV93_RS25570 () | 28165..28422 | - | 258 | WP_000864310.1 | conjugal transfer protein TrbE | - |
| CXV93_RS25575 () | 28449..30299 | - | 1851 | WP_000826177.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CXV93_RS25580 () | 30296..30718 | - | 423 | WP_001229309.1 | HNH endonuclease | - |
| CXV93_RS25585 () | 30743..31114 | - | 372 | WP_000174465.1 | hypothetical protein | - |
| CXV93_RS25590 () | 31111..31749 | - | 639 | WP_000087539.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CXV93_RS25595 () | 31776..32294 | - | 519 | WP_000009088.1 | hypothetical protein | - |
| CXV93_RS25600 () | 32357..32665 | - | 309 | WP_000412445.1 | hypothetical protein | - |
| CXV93_RS25605 () | 32692..33684 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| CXV93_RS25610 () | 33681..34313 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| CXV93_RS25615 () | 34310..34696 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| CXV93_RS25620 () | 34693..37323 | - | 2631 | WP_000069771.1 | type IV secretion system protein TraC | - |
| CXV93_RS25635 () | 37988..38461 | - | 474 | WP_000549566.1 | hypothetical protein | - |
| CXV93_RS25640 () | 38454..38867 | - | 414 | WP_000549574.1 | hypothetical protein | - |
| CXV93_RS25645 () | 38860..39081 | - | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| CXV93_RS25650 () | 39216..39731 | - | 516 | WP_000809872.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CXV93_RS25655 () | 39731..40081 | - | 351 | WP_071586941.1 | conjugal transfer protein TrbD | - |
| CXV93_RS25660 () | 40035..40622 | - | 588 | WP_001309238.1 | conjugal transfer protein TraP | - |
| CXV93_RS25665 () | 40591..42042 | - | 1452 | WP_000146663.1 | conjugal transfer protein TraB | - |
| CXV93_RS25670 () | 42042..42770 | - | 729 | WP_001230767.1 | type-F conjugative transfer system secretin TraK | - |
| CXV93_RS25675 () | 42757..43323 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| CXV93_RS25680 () | 43345..43656 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| CXV93_RS25685 () | 43671..44030 | - | 360 | WP_001099001.1 | type IV conjugative transfer system pilin TraA | - |
| CXV93_RS25690 () | 44063..44458 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| CXV93_RS25695 () | 44557..45246 | - | 690 | WP_000283387.1 | conjugal transfer transcriptional regulator TraJ | - |
| CXV93_RS25700 () | 45433..45816 | - | 384 | WP_001151538.1 | relaxosome protein TraM | - |
| CXV93_RS25705 () | 46230..46739 | + | 510 | WP_000759173.1 | transglycosylase SLT domain-containing protein | - |
| CXV93_RS25710 () | 47036..47857 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| CXV93_RS25715 () | 47967..48263 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| CXV93_RS25725 () | 48655..48859 | + | 205 | Protein_58 | pilus protein | - |
| CXV93_RS25730 () | 49160..49318 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 49362..49586 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 49362..49586 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 49362..49586 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 49362..49586 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| CXV93_RS26915 () | 49398..49577 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| CXV93_RS25735 () | 49598..50317 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| CXV93_RS25740 () | 50314..50748 | - | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| CXV93_RS25745 () | 50817..52781 | - | 1965 | WP_032327613.1 | ParB/RepB/Spo0J family partition protein | - |
| CXV93_RS25750 () | 52842..53075 | - | 234 | WP_000006003.1 | DUF905 family protein | - |
| CXV93_RS25755 () | 53133..53660 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| CXV93_RS27050 () | 54054..54447 | + | 394 | Protein_66 | pilus protein | - |
| CXV93_RS25775 () | 54532..55095 | - | 564 | WP_001309257.1 | class I SAM-dependent methyltransferase | - |
| CXV93_RS25780 () | 55142..56503 | - | 1362 | WP_000170705.1 | DUF3560 domain-containing protein | - |
| CXV93_RS25785 () | 56555..56785 | - | 231 | WP_001537563.1 | hypothetical protein | - |
| CXV93_RS27055 () | 57466..57774 | + | 309 | WP_050576143.1 | hypothetical protein | - |
| CXV93_RS25800 () | 57753..57944 | - | 192 | WP_001027049.1 | hypothetical protein | - |
| CXV93_RS25805 () | 57944..58363 | - | 420 | WP_000271761.1 | DUF1380 family protein | - |
| CXV93_RS25810 () | 58410..58712 | - | 303 | WP_001364029.1 | antirestriction protein | - |
| CXV93_RS25825 () | 59249..60019 | - | 771 | WP_001696195.1 | hypothetical protein | - |
| CXV93_RS25830 () | 60064..60498 | - | 435 | WP_000274451.1 | DUF1380 family protein | - |
| CXV93_RS25835 () | 60512..60733 | - | 222 | WP_001104892.1 | hypothetical protein | - |
| CXV93_RS25840 () | 60734..61417 | - | 684 | WP_000086171.1 | DNA methylase | - |
| CXV93_RS25845 () | 61493..61804 | - | 312 | WP_001309256.1 | hypothetical protein | - |
| CXV93_RS26920 () | 61868..62227 | - | 360 | WP_001336695.1 | DUF1281 domain-containing protein | - |
| CXV93_RS26925 () | 62234..62377 | - | 144 | WP_000270807.1 | DUF1281 domain-containing protein | - |
| CXV93_RS25865 () | 62544..63320 | - | 777 | Protein_81 | hypothetical protein | - |
| CXV93_RS25870 () | 63554..64516 | - | 963 | WP_000756328.1 | ParB/RepB/Spo0J family partition protein | - |
| CXV93_RS25875 () | 64513..65718 | - | 1206 | WP_000817635.1 | AAA family ATPase | - |
| CXV93_RS25880 () | 65980..66252 | + | 273 | WP_001695087.1 | hypothetical protein | - |
| CXV93_RS25885 () | 66233..67441 | + | 1209 | WP_001695118.1 | IS91 family transposase | - |
| CXV93_RS25890 () | 68124..68375 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CXV93_RS25895 () | 68372..68659 | + | 288 | WP_001270422.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CXV93_RS25900 () | 68661..69072 | + | 412 | Protein_88 | DDE-type integrase/transposase/recombinase | - |
| CXV93_RS25910 () | 69716..70693 | + | 978 | WP_000361613.1 | RepB family plasmid replication initiator protein | - |
| CXV93_RS25915 () | 70936..71676 | - | 741 | WP_001066944.1 | tyrosine-type recombinase/integrase | - |
| CXV93_RS25920 () | 71797..71925 | - | 129 | WP_032164396.1 | hypothetical protein | - |
| CXV93_RS25930 () | 72888..73193 | + | 306 | WP_000336590.1 | major pilus subunit operon regulatory protein PapB | - |
| CXV93_RS25935 () | 73445..74341 | + | 897 | WP_126125596.1 | transcriptional regulator HilD | - |
| CXV93_RS25940 () | 74355..74798 | + | 444 | WP_001220546.1 | lytic transglycosylase domain-containing protein | - |
| CXV93_RS25945 () | 75097..75807 | + | 711 | WP_113705914.1 | type IV pilus major pilin | - |
| CXV93_RS25950 () | 75870..77441 | + | 1572 | WP_001759776.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| CXV93_RS25955 () | 77460..77873 | + | 414 | WP_001201934.1 | TcpQ domain-containing protein | - |
| CXV93_RS25960 () | 77891..79348 | + | 1458 | WP_000768353.1 | hypothetical protein | - |
| CXV93_RS25965 () | 79351..79911 | + | 561 | WP_001047585.1 | hypothetical protein | - |
| CXV93_RS25970 () | 79913..80740 | + | 828 | WP_001054274.1 | hypothetical protein | - |
| CXV93_RS25975 () | 80728..81213 | + | 486 | WP_000336151.1 | hypothetical protein | - |
| CXV93_RS25980 () | 81411..82745 | + | 1335 | WP_001380305.1 | Flp pilus assembly complex ATPase component TadA | - |
| CXV93_RS25985 () | 82729..83754 | + | 1026 | WP_001759772.1 | type II secretion system F family protein | - |
| CXV93_RS25990 () | 83769..84890 | + | 1122 | WP_000857355.1 | hypothetical protein | - |
| CXV93_RS25995 () | 84893..85747 | + | 855 | WP_000289148.1 | A24 family peptidase | - |
| CXV93_RS26005 () | 86766..87994 | + | 1229 | WP_088895425.1 | IS3-like element IS2 family transposase | - |
| CXV93_RS26010 () | 88197..88607 | - | 411 | Protein_107 | Tn3 family transposase | - |
| CXV93_RS26015 () | 88816..88962 | + | 147 | Protein_108 | IS30 family transposase | - |
| CXV93_RS26025 () | 89298..89681 | - | 384 | WP_126125597.1 | hypothetical protein | - |
| CXV93_RS26030 () | 90281..90880 | - | 600 | WP_001695206.1 | proQ/FINO family protein | - |
| CXV93_RS26035 () | 90942..91166 | + | 225 | WP_001695205.1 | hypothetical protein | - |
| CXV93_RS26040 () | 91094..91279 | + | 186 | Protein_112 | transposase domain-containing protein | - |
| CXV93_RS26050 () | 91336..91809 | - | 474 | Protein_113 | IS3 family transposase | - |
| CXV93_RS26055 () | 91899..93095 | - | 1197 | Protein_114 | group II intron reverse transcriptase/maturase | - |
| CXV93_RS26065 () | 93169..93441 | + | 273 | WP_001695087.1 | hypothetical protein | - |
| CXV93_RS26070 () | 93422..94630 | + | 1209 | WP_001695118.1 | IS91 family transposase | - |
| CXV93_RS26075 () | 94795..95121 | - | 327 | WP_205755194.1 | reverse transcriptase | - |
| CXV93_RS26085 () | 95794..96533 | - | 740 | Protein_118 | IS3 family transposase | - |
| CXV93_RS26090 () | 96958..97116 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 97181..97375 | - | 195 | NuclAT_1 | - | Antitoxin Detail |
| - () | 97181..97375 | - | 195 | NuclAT_1 | - | Antitoxin Detail |
| - () | 97181..97375 | - | 195 | NuclAT_1 | - | Antitoxin Detail |
| - () | 97181..97375 | - | 195 | NuclAT_1 | - | Antitoxin Detail |
| CXV93_RS26095 () | 97387..98106 | - | 720 | WP_001759770.1 | plasmid SOS inhibition protein A | - |
| CXV93_RS26100 () | 98103..98537 | - | 435 | WP_000845924.1 | conjugation system SOS inhibitor PsiB | - |
| CXV93_RS26105 () | 98592..99890 | - | 1299 | Protein_122 | hypothetical protein | - |
| CXV93_RS26110 () | 99889..100725 | + | 837 | Protein_123 | IS91 family transposase | - |
| CXV93_RS26120 () | 101002..101367 | + | 366 | WP_000124102.1 | hypothetical protein | - |
| CXV93_RS26930 () | 101352..101495 | + | 144 | Protein_125 | IS91 family transposase | - |
| CXV93_RS26130 () | 101682..102295 | - | 614 | Protein_126 | transposase | - |
| CXV93_RS26135 () | 102452..102793 | - | 342 | Protein_127 | hypothetical protein | - |
| CXV93_RS26145 () | 104044..104886 | - | 843 | Protein_129 | hypothetical protein | - |
| CXV93_RS26155 () | 105074..105346 | + | 273 | WP_001695087.1 | hypothetical protein | - |
| CXV93_RS26160 () | 105327..106535 | + | 1209 | WP_001695118.1 | IS91 family transposase | - |
| CXV93_RS26170 () | 106858..107445 | + | 588 | Protein_132 | IS91 family transposase | - |
| CXV93_RS26175 () | 107596..107775 | - | 180 | WP_032243407.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|