MGE detailed information
MGE type: Conjugative plasmid MGE length: 96413 bp
Accession: NZ_CP024854 Location: 1..96413 Organism: Escherichia coli strain AR_0006 Replicon: plasmid tig00000311
Accession: NZ_CP024854 Location: 1..96413 Organism: Escherichia coli strain AR_0006 Replicon: plasmid tig00000311
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM333_RS27290 () | 555..1754 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| AM333_RS27295 () | 1764..1952 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| AM333_RS27310 () | 2743..3774 | + | 1032 | WP_000907874.1 | replication initiation protein | - |
| AM333_RS28435 () | 4470..4628 | + | 159 | WP_000841008.1 | hypothetical protein | - |
| AM333_RS27325 () | 4683..4952 | + | 270 | WP_000079928.1 | hypothetical protein | Antitoxin Detail |
| AM333_RS27330 () | 4949..5230 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AM333_RS27335 () | 5270..6118 | + | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| AM333_RS27340 () | 6476..7675 | - | 1200 | WP_000948429.1 | IS91 family transposase ISSbo1 | Transposase |
| AM333_RS27345 () | 7685..7873 | - | 189 | WP_000957857.1 | hypothetical protein | - |
| AM333_RS27350 () | 8270..9415 | + | 1146 | WP_000976514.1 | Beta-lactamase | ARG |
| AM333_RS27355 () | 9509..10042 | + | 534 | WP_001221666.1 | lipocalin family protein | - |
| AM333_RS27360 () | 10039..10356 | - | 318 | WP_000118520.1 | quaternary ammonium compound efflux SMR transporter SugE | - |
| AM333_RS27370 () | 11216..12319 | + | 1104 | WP_040028050.1 | colicin transporter | - |
| AM333_RS27375 () | 12336..12671 | - | 336 | WP_023166814.1 | colicin immunity protein | - |
| AM333_RS27385 () | 12800..13147 | + | 348 | WP_000142441.1 | hypothetical protein | - |
| AM333_RS27390 () | 13165..13755 | - | 591 | WP_000194573.1 | hypothetical protein | - |
| AM333_RS27395 () | 13755..14012 | - | 258 | WP_000371885.1 | hypothetical protein | - |
| AM333_RS27400 () | 14670..14954 | + | 285 | WP_001331078.1 | hypothetical protein | - |
| AM333_RS27405 () | 14947..15636 | + | 690 | WP_000796232.1 | hypothetical protein | - |
| AM333_RS27410 () | 15633..16421 | + | 789 | WP_000016498.1 | site-specific integrase | - |
| AM333_RS27415 () | 16601..17245 | + | 645 | WP_001144036.1 | ParA family protein | - |
| AM333_RS27420 () | 17332..17640 | + | 309 | WP_000048808.1 | hypothetical protein | - |
| AM333_RS27425 () | 18054..19034 | + | 981 | WP_000688519.1 | plasmid segregation protein ParM | - |
| AM333_RS27430 () | 19027..19443 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| AM333_RS27435 () | 19445..20719 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| AM333_RS27440 () | 20719..21156 | - | 438 | WP_000109072.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AM333_RS27445 () | 21153..21401 | - | 249 | WP_000618111.1 | DinI-like family protein | - |
| AM333_RS27455 () | 21819..22721 | + | 903 | WP_000273912.1 | DUF1281 domain-containing protein | - |
| AM333_RS27460 () | 22718..23029 | + | 312 | WP_014640311.1 | hypothetical protein | - |
| AM333_RS27465 () | 23105..23788 | + | 684 | WP_000086121.1 | DNA methylase | - |
| AM333_RS27470 () | 23789..24010 | + | 222 | WP_001104893.1 | hypothetical protein | - |
| AM333_RS27475 () | 24024..24458 | + | 435 | WP_000274493.1 | DUF1380 family protein | - |
| AM333_RS28440 () | 24509..25285 | + | 777 | WP_024135924.1 | hypothetical protein | - |
| AM333_RS27490 () | 25826..26128 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| AM333_RS27495 () | 26175..26597 | + | 423 | WP_000271763.1 | DUF1380 family protein | - |
| AM333_RS27500 () | 26594..26785 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| AM333_RS27510 () | 27064..28731 | - | 1668 | WP_012372796.1 | group II intron reverse transcriptase/maturase | - |
| AM333_RS28445 () | 29462..29530 | - | 69 | Protein_37 | pilus protein | - |
| AM333_RS27520 () | 30551..32452 | + | 1902 | WP_100190671.1 | group II intron reverse transcriptase/maturase | - |
| AM333_RS27525 () | 32602..33087 | + | 486 | WP_031619450.1 | single-stranded DNA-binding protein | - |
| AM333_RS27530 () | 33145..33378 | + | 234 | WP_000005985.1 | DUF905 family protein | - |
| AM333_RS27535 () | 33437..35395 | + | 1959 | WP_001145462.1 | ParB/RepB/Spo0J family partition protein | - |
| AM333_RS27540 () | 35450..35884 | + | 435 | WP_000845904.1 | conjugation system SOS inhibitor PsiB | - |
| AM333_RS27545 () | 35881..36600 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| AM333_RS27550 () | 36597..37193 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| AM333_RS27560 () | 37656..38156 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| AM333_RS27575 () | 38885..39319 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| AM333_RS27580 () | 39413..39679 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| AM333_RS27585 () | 39744..40634 | + | 891 | WP_000038332.1 | Recombination-promoting nuclease RpnA | VF |
| AM333_RS27590 () | 40634..40879 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| AM333_RS27595 () | 40910..41161 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| AM333_RS27605 () | 41742..42590 | + | 849 | WP_001077021.1 | DUF4942 domain-containing protein | - |
| AM333_RS27610 () | 42676..43011 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| AM333_RS27615 () | 43245..43577 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| AM333_RS27620 () | 43588..46287 | + | 2700 | WP_010891268.1 | Protein TraI | Relaxase |
| AM333_RS27625 () | 46324..48615 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| AM333_RS27630 () | 48608..49678 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| AM333_RS27635 () | 49697..50905 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 51085..51147 | - | 63 | NuclAT_0 | - | - |
| - () | 51085..51147 | - | 63 | NuclAT_0 | - | - |
| - () | 51085..51147 | - | 63 | NuclAT_0 | - | - |
| - () | 51085..51147 | - | 63 | NuclAT_0 | - | - |
| AM333_RS27640 () | 51197..51349 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| AM333_RS27645 () | 51421..51672 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| AM333_RS28450 () | 52331..52507 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| AM333_RS27650 () | 52899..53108 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| AM333_RS27655 () | 53180..53830 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| AM333_RS27660 () | 53904..56072 | - | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| AM333_RS27665 () | 56169..56753 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| AM333_RS27670 () | 56782..57984 | - | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| AM333_RS27675 () | 57951..58565 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| AM333_RS27680 () | 58565..61609 | - | 3045 | WP_100190673.1 | IncI1-type conjugal transfer protein TraU | - |
| AM333_RS27685 () | 61699..62499 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| AM333_RS27690 () | 62483..62671 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| AM333_RS27695 () | 62735..63139 | - | 405 | WP_000086959.1 | IncI1-type conjugal transfer protein TraR | - |
| AM333_RS27700 () | 63190..63717 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| AM333_RS27705 () | 63717..64421 | - | 705 | WP_000801919.1 | IncI1-type conjugal transfer protein TraP | - |
| AM333_RS27710 () | 64421..65710 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| AM333_RS27715 () | 65713..66696 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| AM333_RS27720 () | 66707..67399 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| AM333_RS27725 () | 67396..67743 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| AM333_RS27730 () | 67761..71528 | - | 3768 | WP_001141527.1 | DNA primase | - |
| AM333_RS27735 () | 71618..72169 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| AM333_RS27740 () | 72184..72474 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| AM333_RS27745 () | 72471..73619 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| AM333_RS27750 () | 73616..74434 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| AM333_RS27755 () | 74431..74889 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| AM333_RS27760 () | 75284..75868 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| AM333_RS27765 () | 75928..77130 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| AM333_RS27770 () | 77215..78039 | - | 825 | WP_001238939.1 | hypothetical protein | - |
| AM333_RS27775 () | 78190..79344 | - | 1155 | WP_001139957.1 | integrase | - |
| AM333_RS28455 () | 80827..80979 | + | 153 | WP_071561724.1 | prepilin | - |
| AM333_RS27815 () | 80976..82400 | - | 1425 | WP_001389385.1 | hypothetical protein | VF |
| AM333_RS27820 () | 82400..83056 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| AM333_RS27825 () | 83041..83601 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| AM333_RS27830 () | 83611..84225 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| AM333_RS27835 () | 84243..85340 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| AM333_RS27840 () | 85353..86906 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| AM333_RS27845 () | 86917..87369 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| AM333_RS27850 () | 87356..88651 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| AM333_RS27855 () | 88644..90326 | - | 1683 | WP_032311054.1 | Outer membrane lipoprotein BfpB | VF |
| AM333_RS27860 () | 90340..90777 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| AM333_RS27865 () | 90777..91844 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| AM333_RS27875 () | 92518..92970 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| AM333_RS27880 () | 93013..93267 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| AM333_RS27885 () | 93535..94101 | - | 567 | WP_000776428.1 | hypothetical protein | - |
| AM333_RS27890 () | 94115..94798 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| AM333_RS27900 () | 95052..95585 | - | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| AM333_RS27910 () | 96027..96314 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli | Conjugative plasmid | TA10119, TA30466 | NC_025198 | 1..92339 | 0.006 |