NZ_CP0248161..176274

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 176274 bp
Accession: NZ_CP024816        Location: 1..176274         Organism: Escherichia coli strain CREC-629       Replicon: plasmid pCREC-629_1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CU080_RS25645 () 340..1281 + 942 Protein_1 Tn3 family transposase TnpA_Tn3 Transposase
CU080_RS25650 () 1333..2037 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
CU080_RS25655 () 2101..2307 - 207 Protein_3 IS4 family transposase -
CU080_RS25665 () 2450..3310 + 861 WP_000557454.1 SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD ARG
CU080_RS25670 () 3323..3865 + 543 WP_000587837.1 AAA family ATPase -
CU080_RS25675 () 4347..4538 - 192 WP_000951934.1 hypothetical protein -
CU080_RS25680 () 4562..4789 + 228 WP_000248278.1 hypothetical protein -
CU080_RS25685 () 4840..5967 + 1128 WP_014837927.1 DUF3883 domain-containing protein -
CU080_RS25690 () 6004..6708 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CU080_RS25695 () 6761..7267 - 507 Protein_10 dihydrodipicolinate synthase family protein -
CU080_RS25700 () 7500..7694 - 195 WP_000796505.1 hypothetical protein -
CU080_RS25705 () 7668..8108 + 441 Protein_12 zinc-binding dehydrogenase -
CU080_RS25710 () 8239..9117 + 879 WP_000338039.1 sugar ABC transporter permease -
CU080_RS25715 () 9107..9994 + 888 WP_001271561.1 carbohydrate ABC transporter permease -
CU080_RS25720 () 10005..10829 + 825 WP_000922702.1 phosphodiesterase -
CU080_RS25725 () 10835..11908 + 1074 WP_000950177.1 sn-glycerol-3-phosphate import ATP-binding protein UgpC VF
CU080_RS25730 () 11901..13211 + 1311 WP_000476108.1 ABC transporter substrate-binding protein -
CU080_RS25735 () 13270..13578 - 309 Protein_18 IS4 family transposase ISEc13 Transposase
CU080_RS25740 () 13655..13888 - 234 Protein_19 Tn3 family transposase ISPsy39 Transposase
CU080_RS25745 () 13910..15106 - 1197 Protein_20 IS3 family transposase -
CU080_RS25750 () 15131..15835 + 705 WP_001067834.1 IS6 family transposase IS26 Transposase
CU080_RS25755 () 15893..16423 - 531 Protein_22 histidine-type phosphatase -
CU080_RS25760 () 16545..17030 - 486 WP_000874189.1 hypothetical protein -
CU080_RS25765 () 17055..17540 - 486 WP_001267177.1 TlpA family protein disulfide reductase -
CU080_RS25770 () 17527..18222 - 696 WP_000117262.1 Lipoprotein-releasing system ATP-binding protein LolD VF
CU080_RS25775 () 18227..19357 - 1131 WP_000729220.1 ABC transporter permease -
CU080_RS25780 () 19347..20630 - 1284 WP_100183867.1 ABC transporter permease -
CU080_RS25785 () 20633..22012 - 1380 WP_000119836.1 DUF2318 domain-containing protein -
CU080_RS25790 () 22116..22643 - 528 WP_000178050.1 iron transporter -
CU080_RS25795 () 22684..24570 - 1887 WP_000118029.1 FTR1 family iron permease -
CU080_RS25805 () 24917..25732 - 816 WP_012372823.1 Na(+)-translocating NADH-quinone reductase subunit C -
CU080_RS25810 () 25915..26421 - 507 WP_000949452.1 protein disulfide oxidoreductase -
CU080_RS25815 () 26411..26569 - 159 WP_000449408.1 DsbA family protein -
CU080_RS28565 () 26719..26832 - 114 Protein_34 IS6 family transposase -
CU080_RS25830 () 27032..27729 + 698 Protein_35 IS1 family transposase IS1X2 Transposase
CU080_RS25835 () 27744..28907 + 1164 Protein_36 IS4 family transposase IS10R Transposase
CU080_RS25840 () 28917..29288 - 372 WP_035689358.1 Transposon Tn10 TetD protein VF
CU080_RS25845 () 29421..30014 + 594 WP_000428546.1 tetracyline resistance-associated transcriptional repressor TetC -
CU080_RS25850 () 30127..31332 - 1206 WP_001089068.1 Tetracycline resistance protein, class B ARG
CU080_RS25855 () 31414..32037 + 624 WP_000088605.1 Tetracycline repressor protein class B from transposon Tn10 VF
CU080_RS25860 () 32015..32701 - 687 WP_001284954.1 winged helix-turn-helix domain-containing protein -
CU080_RS25865 () 32709..33095 - 387 WP_000460651.1 hypothetical protein -
CU080_RS25870 () 33088..33351 - 264 WP_049802299.1 antibiotic biosynthesis monooxygenase -
CU080_RS25875 () 33348..34045 - 698 Protein_44 IS1 family transposase IS1R Transposase
CU080_RS25890 () 34221..34925 + 705 WP_001067834.1 IS6 family transposase IS26 Transposase
CU080_RS25905 () 35248..36780 - 1533 WP_013362816.1 IS91 family transposase ISVsa3 Transposase
CU080_RS28375 () 37007..37348 - 342 WP_023909256.1 60 kDa chaperonin 2 VF
CU080_RS25915 () 37309..37758 - 450 WP_013362817.1 hypothetical protein -
CU080_RS28380 () 38273..38443 - 171 WP_170852050.1 rRNA adenine methyltransferase -
CU080_RS25920 () 38388..39125 - 738 WP_013362818.1 rRNA adenine N-6-methyltransferase ARG
CU080_RS25925 () 39251..39346 - 96 WP_013362819.1 23S rRNA methyltransferase attenuation leader peptide -
CU080_RS25930 () 39481..40185 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CU080_RS25940 () 40307..41212 + 906 WP_000219391.1 hypothetical protein ARG
CU080_RS25945 () 41209..42447 + 1239 WP_000004159.1 MFS transporter -
CU080_RS25950 () 42447..43031 + 585 WP_001137892.1 TetR family transcriptional regulator -
CU080_RS25965 () 43524..44288 - 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
CU080_RS28385 () 44406..44471 - 66 Protein_57 EAL domain-containing protein -
CU080_RS25975 () 44515..44820 - 306 WP_000130000.1 hypothetical protein Relaxase
CU080_RS25980 () 44831..46036 - 1206 WP_000184001.1 chromate efflux transporter -
CU080_RS25985 () 46192..46395 - 204 WP_000376616.1 hypothetical protein -
CU080_RS25995 () 46523..47362 - 840 WP_000259031.1 Dihydropteroate synthase ARG
CU080_RS26000 () 47356..47703 - 348 WP_000679427.1 Multidrug transporter EmrE ARG
CU080_RS26005 () 47909..48697 - 789 WP_000503573.1 Streptomycin 3''-adenylyltransferase ARG
CU080_RS26010 () 48828..49301 - 474 WP_001389366.1 Dihydrofolate reductase type 1 ARG
CU080_RS26015 () 49459..50472 + 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
CU080_RS28390 () 50675..50932 + 258 Protein_66 DUF3330 domain-containing protein -
CU080_RS26025 () 50983..51687 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
CU080_RS26030 () 51753..52142 + 390 Protein_68 dihydrodipicolinate synthase family protein -
CU080_RS26035 () 52167..52547 + 381 WP_000710783.1 Rid family detoxifying hydrolase -
CU080_RS26040 () 52580..53545 + 966 WP_001022265.1 2-keto-3-deoxygluconate transporter -
CU080_RS26045 () 53591..54343 - 753 WP_000562172.1 IclR family transcriptional regulator -
CU080_RS26050 () 54948..55232 + 285 WP_001387467.1 ribbon-helix-helix domain-containing protein Antitoxin Detail
CU080_RS26055 () 55232..55507 + 276 WP_000421272.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
CU080_RS26060 () 55613..55906 + 294 WP_001105060.1 hypothetical protein -
CU080_RS26065 () 55941..56069 - 129 Protein_75 IS481 family transposase -
CU080_RS26070 () 56102..57271 - 1170 WP_001072355.1 hypothetical protein -
CU080_RS26080 () 57764..58071 + 308 Protein_77 type II toxin-antitoxin system ParD family antitoxin -
CU080_RS26090 () 58414..58596 + 183 WP_042065278.1 hypothetical protein -
CU080_RS26095 () 58717..59457 + 741 WP_001066942.1 tyrosine-type recombinase/integrase -
CU080_RS26100 () 59742..60713 - 972 WP_100183871.1 RepB family plasmid replication initiator protein -
CU080_RS26105 () 60749..61453 + 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
CU080_RS28395 () 62695..63063 + 369 WP_001553860.1 hypothetical protein -
CU080_RS26135 () 63550..64247 + 698 Protein_83 IS1 family transposase IS1R Transposase
CU080_RS26140 () 64263..64592 + 330 Protein_84 TOBE domain-containing protein -
CU080_RS26145 () 64701..65633 - 933 WP_000081352.1 homocysteine S-methyltransferase -
CU080_RS26150 () 65620..67023 - 1404 WP_001373486.1 S-methylmethionine permease -
CU080_RS26155 () 67267..68247 + 981 WP_000019407.1 IS5 family transposase IS5D Transposase
CU080_RS26160 () 68475..68792 + 318 WP_001513659.1 hypothetical protein -
CU080_RS26165 () 68742..69155 - 414 Protein_89 IS3 family transposase ISLad1 Transposase
CU080_RS26170 () 69079..69438 - 360 WP_001513660.1 hypothetical protein -
CU080_RS26175 () 69466..69645 - 180 WP_001513661.1 hypothetical protein -
CU080_RS26180 () 69650..70030 - 381 WP_001216034.1 type II toxin-antitoxin system death-on-curing family toxin Toxin Detail
CU080_RS26185 () 70030..70251 - 222 WP_001190712.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
CU080_RS26190 () 70434..71990 + 1557 WP_001553856.1 type I restriction-modification system subunit M -
CU080_RS26195 () 71987..73258 + 1272 WP_048266692.1 restriction endonuclease subunit S -
CU080_RS26200 () 73380..76496 + 3117 WP_001553854.1 HsdR family type I site-specific deoxyribonuclease -
CU080_RS26210 () 76710..77407 + 698 Protein_97 IS1 family transposase IS1G Transposase
CU080_RS26215 () 77544..78476 - 933 WP_000991832.1 hypothetical protein -
CU080_RS26220 () 78480..79475 - 996 WP_000246636.1 hypothetical protein -
CU080_RS26225 () 79940..82078 + 2139 WP_000350635.1 AAA family ATPase -
CU080_RS26230 () 82240..82656 - 417 WP_001044768.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
CU080_RS26235 () 82653..82883 - 231 WP_001261287.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
CU080_RS26245 () 83190..86309 + 3120 WP_001553851.1 hypothetical protein -
CU080_RS26250 () 86572..87705 + 1134 WP_000545983.1 DUF3800 domain-containing protein -
CU080_RS26255 () 87725..88009 + 285 WP_000642771.1 hypothetical protein -
CU080_RS26260 () 88006..88203 - 198 WP_000215657.1 hypothetical protein -
CU080_RS26265 () 88837..89055 + 219 WP_000813634.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
CU080_RS26270 () 89057..89362 + 306 WP_001159868.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
CU080_RS26275 () 89363..90169 + 807 WP_000016982.1 site-specific integrase -
CU080_RS26280 () 90943..91698 + 756 WP_000852146.1 replication initiation protein RepE -
CU080_RS26285 () 92286..93452 + 1167 WP_000772446.1 Sporulation initiation inhibitor protein Soj VF
CU080_RS26290 () 93452..94423 + 972 WP_000817036.1 ParB/RepB/Spo0J family plasmid partition protein -
CU080_RS26305 () 95290..96192 + 903 WP_001348615.1 DUF1281 domain-containing protein -
CU080_RS26310 () 96196..96500 + 305 Protein_114 hypothetical protein -
CU080_RS26315 () 96577..97260 + 684 WP_000086185.1 DNA methylase -
CU080_RS26320 () 97261..97482 + 222 WP_001104873.1 hypothetical protein -
CU080_RS26325 () 97496..97930 + 435 WP_000274437.1 DUF1380 family protein -
CU080_RS28135 () 97981..98757 + 777 WP_001753849.1 hypothetical protein -
CU080_RS26340 () 99297..99599 + 303 WP_001671341.1 antirestriction protein -
CU080_RS26345 () 99646..100068 + 423 WP_000271753.1 DUF1380 family protein -
CU080_RS26350 () 100065..100256 + 192 WP_001027516.1 hypothetical protein -
CU080_RS26365 () 101291..101521 + 231 WP_000218642.1 hypothetical protein -
CU080_RS26370 () 101573..102934 + 1362 WP_000170714.1 DUF3560 domain-containing protein -
CU080_RS26375 () 102982..103545 + 564 WP_001348621.1 class I SAM-dependent methyltransferase -
CU080_RS26380 () 103571..103807 + 237 WP_032153960.1 hypothetical protein -
CU080_RS26395 () 104908..105477 - 570 WP_089634947.1 hypothetical protein -
CU080_RS26410 () 106781..107539 + 759 Protein_128 site-specific integrase -
CU080_RS26415 () 107697..108707 + 1011 WP_000053332.1 substrate-binding domain-containing protein -
CU080_RS26420 () 108803..110929 + 2127 WP_000253905.1 alpha-galactosidase -
CU080_RS26425 () 110992..112269 + 1278 WP_001083369.1 MFS transporter -
CU080_RS26430 () 112266..113699 + 1434 WP_024170639.1 glycoside hydrolase family 32 protein -
CU080_RS26435 () 113894..115288 + 1395 WP_001037799.1 carbohydrate porin -
CU080_RS26445 () 115534..115638 - 105 Protein_134 thiosulfate reductase cytochrome B subunit -
CU080_RS26455 () 115695..116388 + 694 Protein_135 IS1 family transposase IS1A Transposase
CU080_RS26460 () 116497..116859 + 363 WP_059330006.1 IS66 family transposase ISEc23 Transposase
CU080_RS26465 () 116856..117206 + 351 WP_000624725.1 IS66 family insertion sequence element accessory protein TnpB -
CU080_RS26470 () 117237..117458 + 222 WP_000080217.1 hypothetical protein -
CU080_RS26475 () 117410..117751 + 342 Protein_139 transposase -
CU080_RS26480 () 117815..118294 - 480 WP_001496175.1 ArgR family transcriptional regulator -
CU080_RS26485 () 118375..119778 - 1404 WP_000514417.1 YfcC family protein -
CU080_RS26490 () 119826..120830 - 1005 WP_000154544.1 Ornithine carbamoyltransferase VF
CU080_RS26495 () 120915..121826 - 912 WP_000440183.1 carbamate kinase -
CU080_RS26500 () 121837..123057 - 1221 WP_100183869.1 arginine deiminase -
CU080_RS26505 () 123950..124432 + 483 Protein_145 VENN motif pre-toxin domain-containing protein -
CU080_RS26510 () 124378..124824 - 447 Protein_146 incFII family plasmid replication initiator RepA -
CU080_RS26515 () 124817..124891 - 75 WP_001365705.1 RepA leader peptide Tap -
CU080_RS26525 () 125127..125384 - 258 WP_000083833.1 replication regulatory protein RepA -
CU080_RS26530 () 125668..125874 - 207 WP_015387399.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 125861..125922 + 62 NuclAT_1 - Antitoxin Detail
- () 125861..125922 + 62 NuclAT_1 - Antitoxin Detail
- () 125861..125922 + 62 NuclAT_1 - Antitoxin Detail
- () 125861..125922 + 62 NuclAT_1 - Antitoxin Detail
CU080_RS26540 () 126061..126243 - 183 WP_000968309.1 hypothetical protein -
CU080_RS26550 () 126344..127046 + 703 Protein_151 IS1 family transposase IS1S Transposase
CU080_RS26560 () 127347..127559 - 213 WP_005012601.1 hypothetical protein -
CU080_RS26565 () 127692..128252 - 561 WP_000139363.1 fertility inhibition protein FinO -
CU080_RS26570 () 128307..129053 - 747 WP_000205701.1 conjugal transfer pilus acetylase TraX -
CU080_RS26575 () 129073..134343 - 5271 WP_012372808.1 Multifunctional conjugation protein TraI Relaxase
CU080_RS26580 () 134343..136514 - 2172 WP_012372807.1 type IV conjugative transfer system coupling protein TraD -
CU080_RS26585 () 136766..137497 - 732 WP_000850424.1 complement resistance protein TraT -
CU080_RS26590 () 137566..138021 - 456 WP_001553825.1 conjugal transfer entry exclusion protein TraS -
CU080_RS26595 () 138018..140843 - 2826 WP_001553826.1 conjugal transfer mating pair stabilization protein TraG -
CU080_RS26600 () 140840..142213 - 1374 WP_172448863.1 conjugal transfer protein TraH -
CU080_RS26605 () 142200..142592 - 393 WP_001553828.1 F-type conjugal transfer protein TrbF -
CU080_RS26610 () 142546..142919 - 374 Protein_162 P-type conjugative transfer protein TrbJ -
CU080_RS26615 () 142849..143403 - 555 WP_001553830.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
CU080_RS26620 () 143390..143674 - 285 WP_000624105.1 type-F conjugative transfer system pilin chaperone TraQ -
CU080_RS26625 () 143755..144090 + 336 WP_000415571.1 hypothetical protein -
CU080_RS26630 () 144071..144412 - 342 WP_000556794.1 conjugal transfer protein TrbA -
CU080_RS26635 () 144426..145169 - 744 WP_001030378.1 type-F conjugative transfer system pilin assembly protein TraF -
CU080_RS26640 () 145162..145419 - 258 WP_000864318.1 conjugal transfer protein TrbE -
CU080_RS26645 () 145446..147254 - 1809 WP_001553831.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
CU080_RS26650 () 147251..147889 - 639 WP_001553832.1 type-F conjugative transfer system pilin assembly protein TrbC -
CU080_RS26655 () 147898..148890 - 993 WP_001553833.1 conjugal transfer pilus assembly protein TraU -
CU080_RS26660 () 148887..149519 - 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
CU080_RS26665 () 149516..149902 - 387 WP_000099690.1 type-F conjugative transfer system protein TrbI -
CU080_RS26670 () 149899..152526 - 2628 WP_001064264.1 type IV secretion system protein TraC -
CU080_RS26675 () 152686..152907 - 222 WP_001278692.1 conjugal transfer protein TraR -
CU080_RS26680 () 153042..153557 - 516 WP_000809832.1 type IV conjugative transfer system lipoprotein TraV -
CU080_RS26685 () 153554..153805 - 252 WP_001038342.1 conjugal transfer protein TrbG -
CU080_RS26690 () 153798..153959 - 162 WP_000741714.1 conjugal transfer protein TrbD -
CU080_RS28145 () 153981..154118 - 138 WP_001553834.1 conjugal transfer protein TrbD -
CU080_RS26695 () 154105..154695 - 591 WP_000002787.1 conjugal transfer protein TraP -
CU080_RS26700 () 154685..156112 - 1428 WP_001553836.1 conjugal transfer protein TraB -
CU080_RS26705 () 156112..156816 - 705 WP_148713163.1 type-F conjugative transfer system secretin TraK -
CU080_RS26710 () 156827..157393 - 567 WP_000399790.1 type IV conjugative transfer system protein TraE -
CU080_RS26715 () 157415..157726 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
CU080_RS26720 () 157741..158106 - 366 WP_000340282.1 type IV conjugative transfer system pilin TraA -
CU080_RS26725 () 158149..158364 - 216 WP_001352842.1 conjugal transfer relaxosome protein TraY -
CU080_RS26730 () 158500..159147 - 648 WP_000332520.1 conjugal transfer transcriptional regulator TraJ -
CU080_RS26735 () 159338..159721 - 384 WP_001063020.1 relaxosome protein TraM -
CU080_RS26740 () 160091..160663 + 573 WP_000949660.1 hypothetical protein VF
CU080_RS26745 () 160959..161780 - 822 WP_001234465.1 DUF945 domain-containing protein -
CU080_RS26750 () 161899..162186 - 288 WP_000107242.1 hypothetical protein -
CU080_RS28400 () 162211..162417 - 207 WP_000275854.1 hypothetical protein -
CU080_RS26760 () 163085..163243 - 159 WP_001302184.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 163308..163506 - 199 NuclAT_0 - Antitoxin Detail
- () 163308..163506 - 199 NuclAT_0 - Antitoxin Detail
- () 163308..163506 - 199 NuclAT_0 - Antitoxin Detail
- () 163308..163506 - 199 NuclAT_0 - Antitoxin Detail
CU080_RS26765 () 163475..163580 - 106 Protein_194 plasmid SOS inhibition protein A -
CU080_RS26770 () 163735..164052 + 318 Protein_195 IS110 family transposase -
CU080_RS26775 () 164341..164592 - 252 Protein_196 iron-containing alcohol dehydrogenase -
CU080_RS26780 () 164677..165300 - 624 WP_000912556.1 potassium channel family protein -
CU080_RS26785 () 165316..166009 - 694 Protein_198 IS1 family transposase IS1A Transposase
CU080_RS26795 () 166042..166620 + 579 WP_032147503.1 DUF2726 domain-containing protein -
CU080_RS26800 () 167033..167386 - 354 WP_000005489.1 hypothetical protein -
CU080_RS26805 () 167858..168880 - 1023 WP_000156883.1 IS110 family transposase ISSm1 Transposase
CU080_RS26815 () 169285..169542 + 258 WP_000083821.1 replication regulatory protein RepA -
CU080_RS26825 () 169778..169852 + 75 WP_001365705.1 RepA leader peptide Tap -
CU080_RS26830 () 169845..170702 + 858 WP_000130948.1 incFII family plasmid replication initiator RepA -
CU080_RS26840 () 171641..172294 + 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
CU080_RS28150 () 172387..172644 + 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
CU080_RS26845 () 172577..172978 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
CU080_RS26850 () 173263..174573 + 1311 WP_001262765.1 DUF262 domain-containing protein -
CU080_RS26855 () 174602..174700 + 99 Protein_209 IS1 family transposase -
CU080_RS26860 () 174850..175710 - 861 WP_000027057.1 Beta-lactamase TEM ARG

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance