MGE detailed information
MGE type: Genomic_island MGE length: 43227 bp
Accession: NZ_CP024050 Location: 1916742..1959968 Organism: Streptococcus suis strain CS100322 Replicon: chromosome
Accession: NZ_CP024050 Location: 1916742..1959968 Organism: Streptococcus suis strain CS100322 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR541_RS09755 () | 1912684..1915803 | + | 3120 | WP_012775354.1 | LPXTG cell wall anchor domain-containing protein | - |
| CR541_RS09760 () | 1915883..1916749 | + | 867 | WP_012027852.1 | Hsp33 family molecular chaperone HslO | - |
| CR541_RS09765 () | 1916742..1917746 | + | 1005 | WP_012775355.1 | tRNA dihydrouridine synthase DusB | - |
| CR541_RS09770 () | 1917892..1918665 | - | 774 | WP_012027854.1 | NUDIX hydrolase | - |
| CR541_RS09775 () | 1918658..1919479 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| CR541_RS09780 () | 1919489..1920526 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| CR541_RS09785 () | 1920640..1923093 | - | 2454 | WP_014636516.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| CR541_RS09790 () | 1923099..1923557 | - | 459 | WP_012027859.1 | transcriptional regulator | - |
| CR541_RS09795 () | 1923707..1924045 | + | 339 | WP_012027860.1 | thiol reductase thioredoxin | - |
| CR541_RS09800 () | 1924045..1924746 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| CR541_RS09805 () | 1925009..1926049 | - | 1041 | WP_012027862.1 | elongation factor Ts | - |
| CR541_RS09810 () | 1926205..1926981 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| CR541_RS09815 () | 1927328..1927840 | - | 513 | WP_012775452.1 | adenylate kinase | - |
| CR541_RS09825 () | 1928494..1933572 | - | 5079 | WP_012775357.1 | S8 family serine peptidase | - |
| CR541_RS09830 () | 1933715..1934254 | - | 540 | WP_002940254.1 | transcription termination/antitermination protein NusG | - |
| CR541_RS09835 () | 1934364..1934540 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| CR541_RS09840 () | 1934550..1934702 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| CR541_RS09845 () | 1934736..1936949 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| CR541_RS09850 () | 1937102..1938070 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| CR541_RS09855 () | 1938072..1938938 | + | 867 | WP_012027870.1 | RluA family pseudouridine synthase | - |
| CR541_RS09860 () | 1938965..1939777 | - | 813 | WP_002938438.1 | pur operon repressor | - |
| CR541_RS09865 () | 1939879..1940745 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| CR541_RS09870 () | 1940745..1941686 | - | 942 | WP_012775359.1 | 3'-5' exoribonuclease YhaM family protein | - |
| CR541_RS09875 () | 1941676..1942914 | - | 1239 | WP_012027874.1 | DNA recombination protein RmuC | - |
| CR541_RS09880 () | 1942915..1943547 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| CR541_RS09885 () | 1943540..1944199 | - | 660 | WP_012027876.1 | Ribulose-phosphate 3-epimerase | VF |
| CR541_RS09890 () | 1944214..1945089 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| CR541_RS09900 () | 1945986..1947563 | - | 1578 | WP_012027878.1 | ABC transporter ATP-binding protein/permease | - |
| CR541_RS09905 () | 1947560..1948807 | - | 1248 | WP_012027879.1 | radical SAM protein | - |
| CR541_RS09910 () | 1949170..1950033 | - | 864 | WP_012027880.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| CR541_RS09920 () | 1950523..1952967 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| CR541_RS09925 () | 1952980..1954710 | - | 1731 | WP_012775361.1 | membrane protein | - |
| CR541_RS09930 () | 1955075..1955983 | - | 909 | WP_012027884.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| CR541_RS09935 () | 1955967..1956497 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
| CR541_RS09940 () | 1956511..1956768 | - | 258 | WP_012775363.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| CR541_RS09945 () | 1956770..1957030 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CR541_RS09950 () | 1957106..1957561 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| CR541_RS09955 () | 1957568..1957897 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CR541_RS09960 () | 1957887..1958174 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| CR541_RS09965 () | 1958272..1958640 | - | 369 | WP_012775453.1 | hypothetical protein | - |
| CR541_RS09970 () | 1958633..1959202 | - | 570 | WP_012775366.1 | ribonuclease M5 | - |
| CR541_RS09975 () | 1959186..1959968 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| CR541_RS09980 () | 1960075..1960212 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| CR541_RS09985 () | 1960380..1961375 | - | 996 | WP_012775367.1 | protein jag | - |
| CR541_RS09990 () | 1961395..1962207 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| CR541_RS09995 () | 1962191..1962550 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| CR541_RS10000 () | 1962621..1964015 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0 |