MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 81125 bp
Accession: NZ_CP023471 Location: 1..81125 Organism: Salmonella enterica subsp. enterica strain BAA-1672 Replicon: plasmid pSalSendai
Accession: NZ_CP023471 Location: 1..81125 Organism: Salmonella enterica subsp. enterica strain BAA-1672 Replicon: plasmid pSalSendai
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CO195_RS22955 () | 405..1262 | - | 858 | WP_048889352.1 | incFII family plasmid replication initiator RepA | - |
| CO195_RS22960 () | 1255..1329 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| CO195_RS22970 () | 1575..1823 | - | 249 | WP_000083837.1 | replication regulatory protein RepA | - |
| CO195_RS22975 () | 2107..2313 | - | 207 | WP_001351576.1 | type I toxin-antitoxin system Hok family toxin | - |
| CO195_RS22985 () | 2538..3128 | - | 591 | WP_048889349.1 | DUF2726 domain-containing protein | - |
| CO195_RS22990 () | 3167..3376 | - | 210 | WP_001299729.1 | hemolysin expression modulator Hha | - |
| CO195_RS22995 () | 3422..3883 | - | 462 | WP_205421511.1 | thermonuclease family protein | - |
| CO195_RS23000 () | 4129..4341 | - | 213 | WP_115376252.1 | ANR family transcriptional regulator | - |
| CO195_RS23005 () | 4476..5036 | - | 561 | WP_115376254.1 | fertility inhibition protein FinO | - |
| CO195_RS23010 () | 5091..5837 | - | 747 | WP_115376256.1 | conjugal transfer pilus acetylase TraX | - |
| CO195_RS23015 () | 5857..11114 | - | 5258 | Protein_10 | conjugative transfer relaxase/helicase TraI | - |
| CO195_RS23020 () | 11114..13276 | - | 2163 | WP_117335804.1 | type IV conjugative transfer system coupling protein TraD | - |
| CO195_RS23025 () | 13529..14260 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| CO195_RS23030 () | 14292..14789 | - | 498 | WP_000605867.1 | hypothetical protein | - |
| CO195_RS23035 () | 14805..17627 | - | 2823 | WP_117335806.1 | conjugal transfer mating pair stabilization protein TraG | - |
| CO195_RS23040 () | 17624..19000 | - | 1377 | WP_000982833.1 | conjugal transfer protein TraH | - |
| CO195_RS23045 () | 18997..19359 | - | 363 | WP_010379880.1 | P-type conjugative transfer protein TrbJ | - |
| CO195_RS23050 () | 19289..19834 | - | 546 | WP_000059821.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| CO195_RS23055 () | 19821..20102 | - | 282 | WP_162887454.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| CO195_RS23060 () | 20224..20571 | - | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| CO195_RS23065 () | 20587..21330 | - | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| CO195_RS23070 () | 21323..21580 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| CO195_RS23075 () | 21607..23415 | - | 1809 | WP_117335810.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| CO195_RS23080 () | 23412..24050 | - | 639 | WP_117335812.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| CO195_RS23085 () | 24059..25051 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| CO195_RS23090 () | 25048..25680 | - | 633 | WP_115376262.1 | type-F conjugative transfer system protein TraW | - |
| CO195_RS23095 () | 25677..26063 | - | 387 | WP_000099690.1 | type-F conjugative transfer system protein TrbI | - |
| CO195_RS23100 () | 26060..28687 | - | 2628 | WP_117335816.1 | type IV secretion system protein TraC | - |
| CO195_RS23105 () | 28847..29068 | - | 222 | WP_115376266.1 | conjugal transfer protein TraR | - |
| CO195_RS23110 () | 29203..29718 | - | 516 | WP_115376267.1 | type IV conjugative transfer system lipoprotein TraV | - |
| CO195_RS23735 () | 29715..29969 | - | 255 | Protein_30 | conjugal transfer protein TrbG | - |
| CO195_RS23120 () | 29962..30315 | - | 354 | WP_115376269.1 | conjugal transfer protein TrbD | - |
| CO195_RS23125 () | 30269..30859 | - | 591 | WP_048889336.1 | conjugal transfer protein TraP | - |
| CO195_RS23130 () | 30849..32276 | - | 1428 | WP_117335818.1 | conjugal transfer protein TraB | - |
| CO195_RS23135 () | 32276..32980 | - | 705 | WP_162887455.1 | type-F conjugative transfer system secretin TraK | - |
| CO195_RS23140 () | 32991..33557 | - | 567 | WP_001717262.1 | type IV conjugative transfer system protein TraE | - |
| CO195_RS23145 () | 33579..33889 | - | 311 | Protein_36 | type IV conjugative transfer system protein TraL | - |
| CO195_RS23150 () | 33904..34269 | - | 366 | WP_000994782.1 | type IV conjugative transfer system pilin TraA | - |
| CO195_RS23155 () | 34303..34698 | - | 396 | WP_048889377.1 | conjugal transfer relaxosome protein TraY | - |
| CO195_RS23160 () | 34797..35486 | - | 690 | WP_048889333.1 | conjugal transfer transcriptional regulator TraJ | - |
| CO195_RS23165 () | 35673..36056 | - | 384 | Protein_40 | relaxosome protein TraM | - |
| CO195_RS23170 () | 36390..36980 | + | 591 | WP_205421512.1 | transglycosylase SLT domain-containing protein | - |
| CO195_RS23175 () | 37276..38097 | - | 822 | WP_143553149.1 | DUF945 domain-containing protein | - |
| CO195_RS23180 () | 38216..38504 | - | 289 | Protein_43 | hypothetical protein | - |
| CO195_RS23740 () | 38529..38735 | - | 207 | WP_000547955.1 | hypothetical protein | - |
| CO195_RS23645 () | 38805..39173 | + | 369 | WP_162887450.1 | hypothetical protein | - |
| CO195_RS23190 () | 39205..39846 | + | 642 | WP_115376276.1 | IS66-like element accessory protein TnpA | - |
| CO195_RS23195 () | 39846..40193 | + | 348 | WP_000624622.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| CO195_RS23200 () | 40213..41784 | + | 1572 | WP_048889386.1 | IS66 family transposase | - |
| CO195_RS23205 () | 42105..42266 | - | 162 | WP_000775236.1 | type I toxin-antitoxin system Hok family toxin | - |
| CO195_RS23210 () | 42540..43259 | - | 720 | WP_048889385.1 | plasmid SOS inhibition protein A | - |
| CO195_RS23215 () | 43256..43690 | - | 435 | WP_115376277.1 | conjugation system SOS inhibitor PsiB | - |
| CO195_RS23220 () | 43745..45703 | - | 1959 | WP_048889383.1 | ParB/RepB/Spo0J family partition protein | - |
| CO195_RS23225 () | 45767..46000 | - | 234 | WP_048889382.1 | DUF905 family protein | - |
| CO195_RS23230 () | 46057..46596 | - | 540 | WP_048889381.1 | single-stranded DNA-binding protein | - |
| CO195_RS23250 () | 47436..47627 | - | 192 | WP_048889375.1 | hypothetical protein | - |
| CO195_RS23255 () | 47624..48046 | - | 423 | WP_115376279.1 | DUF1380 family protein | - |
| CO195_RS23260 () | 48093..48518 | - | 426 | WP_046201850.1 | antirestriction protein | - |
| CO195_RS23745 () | 48935..49654 | - | 720 | WP_205421513.1 | hypothetical protein | - |
| CO195_RS23275 () | 49743..50912 | + | 1170 | WP_117335823.1 | transposase | - |
| CO195_RS23280 () | 50952..51125 | + | 174 | Protein_60 | DUF4113 domain-containing protein | - |
| CO195_RS23285 () | 51266..52228 | - | 963 | WP_048889373.1 | ParB/RepB/Spo0J family partition protein | - |
| CO195_RS23290 () | 52225..53430 | - | 1206 | WP_000817642.1 | AAA family ATPase | - |
| CO195_RS23300 () | 53804..54016 | + | 213 | WP_000402944.1 | hypothetical protein | - |
| CO195_RS23305 () | 54189..54440 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| CO195_RS23310 () | 54437..54724 | + | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CO195_RS23315 () | 54738..54986 | + | 249 | Protein_66 | hypothetical protein | - |
| CO195_RS23320 () | 55011..55301 | + | 291 | WP_048889372.1 | hypothetical protein | - |
| CO195_RS23330 () | 55943..56920 | + | 978 | WP_048889370.1 | RepB family plasmid replication initiator protein | - |
| CO195_RS23335 () | 57181..57381 | - | 201 | Protein_69 | hypothetical protein | - |
| CO195_RS23340 () | 57572..58378 | - | 807 | WP_117335825.1 | site-specific integrase | - |
| CO195_RS23345 () | 58379..58684 | - | 306 | WP_001159866.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| CO195_RS23350 () | 58686..58904 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| CO195_RS23365 () | 59488..59718 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CO195_RS23370 () | 59715..60131 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CO195_RS23380 () | 60522..60845 | + | 324 | Protein_75 | hypothetical protein | - |
| CO195_RS23650 () | 61147..61485 | - | 339 | WP_162887451.1 | hypothetical protein | - |
| CO195_RS23395 () | 61995..62213 | - | 219 | WP_048889380.1 | hypothetical protein | - |
| CO195_RS23400 () | 62319..62594 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CO195_RS23405 () | 62594..62878 | - | 285 | WP_115376289.1 | ribbon-helix-helix protein, CopG family | Antitoxin Detail |
| CO195_RS23415 () | 64148..64417 | - | 270 | WP_048889368.1 | hypothetical protein | - |
| CO195_RS23750 () | 64517..64755 | + | 239 | Protein_81 | IS3 family transposase | - |
| CO195_RS23425 () | 65005..65643 | - | 639 | WP_115376291.1 | ParB N-terminal domain-containing protein | - |
| CO195_RS23430 () | 65628..66854 | - | 1227 | WP_048889365.1 | phosphoadenosine phosphosulfate reductase | - |
| CO195_RS23435 () | 67074..67460 | - | 387 | WP_052747567.1 | helix-turn-helix domain-containing protein | - |
| CO195_RS23440 () | 67471..67788 | - | 318 | WP_048889364.1 | hypothetical protein | - |
| CO195_RS23445 () | 68026..68814 | - | 789 | WP_117335827.1 | EAL domain-containing protein | - |
| CO195_RS23450 () | 68804..69445 | - | 642 | WP_115376298.1 | hypothetical protein | - |
| CO195_RS23455 () | 69519..70292 | - | 774 | WP_117335829.1 | F4 (K88) fimbria accessory protein FaeJ | - |
| CO195_RS23460 () | 70309..71076 | - | 768 | WP_048889361.1 | fimbrial protein | - |
| CO195_RS23465 () | 71107..71904 | - | 798 | WP_117335831.1 | F4 (K88) fimbria minor subunit FaeH | - |
| CO195_RS23475 () | 72131..72919 | - | 789 | WP_162887452.1 | fimbrial protein | - |
| CO195_RS23480 () | 73157..73639 | - | 483 | WP_115376301.1 | F4 (K88) fimbria minor subunit FaeF | - |
| CO195_RS23485 () | 73674..74450 | - | 777 | WP_115376303.1 | F4 (K88) fimbrial chaperone FaeE | - |
| CO195_RS23490 () | 74443..76887 | - | 2445 | WP_117335835.1 | F4 (K88) fimbrial usher FaeD | - |
| CO195_RS23495 () | 76902..77444 | - | 543 | WP_115376306.1 | type 1 fimbrial protein | - |
| CO195_RS23500 () | 77452..77751 | - | 300 | WP_115376311.1 | adhesin biosynthesis transcription regulatory family protein | - |
| CO195_RS23505 () | 78247..78465 | + | 219 | WP_072053207.1 | FaeA/PapI family transcriptional regulator | - |
| CO195_RS23510 () | 78526..79106 | + | 581 | Protein_98 | plasmid pRiA4b ORF-3 family protein | - |
| CO195_RS23515 () | 79061..79852 | - | 792 | Protein_99 | AAA family ATPase | - |
| CO195_RS23520 () | 80078..80353 | - | 276 | WP_021572224.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CO195_RS23525 () | 80350..80619 | - | 270 | WP_048889353.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|