MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 136771 bp
Accession: NZ_CP022035 Location: 1..136771 Organism: Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 Replicon: plasmid punamed2
Accession: NZ_CP022035 Location: 1..136771 Organism: Salmonella enterica subsp. enterica serovar Onderstepoort str. SA20060086 Replicon: plasmid punamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LFZ35_RS24600 () | 1..5304 | + | 5304 | WP_015062632.1 | conjugative transfer relaxase/helicase TraI | - |
| LFZ35_RS24605 () | 5323..5889 | + | 567 | WP_015062631.1 | DUF2726 domain-containing protein | - |
| LFZ35_RS24610 () | 5886..6617 | + | 732 | WP_015062630.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| LFZ35_RS24615 () | 6694..7092 | - | 399 | WP_015062629.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LFZ35_RS24620 () | 7092..7319 | - | 228 | WP_015062628.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LFZ35_RS24625 () | 7534..8097 | + | 564 | WP_015062627.1 | phospholipase D family protein | - |
| LFZ35_RS24630 () | 8228..8488 | + | 261 | WP_088546681.1 | replication regulatory protein RepA | - |
| LFZ35_RS24635 () | 8716..8793 | + | 78 | WP_032489431.1 | RepA leader peptide Tap | - |
| LFZ35_RS24640 () | 8774..9667 | + | 894 | WP_088546682.1 | incFII family plasmid replication initiator RepA | - |
| LFZ35_RS24650 () | 10647..12266 | + | 1620 | WP_088546684.1 | ISL3 family transposase | - |
| LFZ35_RS26120 () | 12327..13157 | + | 831 | Protein_11 | monooxygenase | - |
| LFZ35_RS24665 () | 13189..13641 | - | 453 | WP_015062618.1 | N-acetyltransferase | - |
| LFZ35_RS24670 () | 13690..13767 | + | 78 | Protein_13 | IS1 family transposase | - |
| LFZ35_RS24675 () | 13761..14332 | - | 572 | Protein_14 | recombinase family protein | - |
| LFZ35_RS24680 () | 14799..15833 | + | 1035 | WP_015062615.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| LFZ35_RS24685 () | 15837..17330 | + | 1494 | WP_015062614.1 | xylulokinase | - |
| LFZ35_RS24690 () | 17334..18629 | + | 1296 | WP_015062613.1 | MFS transporter | - |
| LFZ35_RS24700 () | 20018..20254 | + | 237 | WP_015062611.1 | hypothetical protein | - |
| LFZ35_RS24715 () | 22527..23627 | - | 1101 | Protein_19 | DUF3440 domain-containing protein | - |
| LFZ35_RS24720 () | 23823..24776 | - | 954 | WP_015062604.1 | fimbrial protein | - |
| LFZ35_RS24725 () | 24940..25671 | - | 732 | WP_015062603.1 | fimbria/pilus periplasmic chaperone | - |
| LFZ35_RS24730 () | 25684..28158 | - | 2475 | WP_015062602.1 | fimbria/pilus outer membrane usher protein | - |
| LFZ35_RS24735 () | 28196..28777 | - | 582 | WP_088546687.1 | fimbrial protein | - |
| LFZ35_RS24740 () | 29275..29721 | + | 447 | WP_088546688.1 | hypothetical protein | - |
| LFZ35_RS24745 () | 29779..30267 | + | 489 | WP_015062599.1 | CaiF/GrlA family transcriptional regulator | - |
| LFZ35_RS24750 () | 30428..30958 | + | 531 | WP_088546689.1 | CaiF/GrlA family transcriptional regulator | - |
| LFZ35_RS24755 () | 30958..31626 | + | 669 | WP_088546690.1 | hypothetical protein | - |
| LFZ35_RS24760 () | 31969..32208 | + | 240 | WP_088546691.1 | hypothetical protein | - |
| LFZ35_RS24765 () | 32337..33275 | + | 939 | WP_088546692.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| LFZ35_RS24770 () | 33272..33882 | - | 611 | Protein_30 | DUF2913 family protein | - |
| LFZ35_RS24780 () | 34255..34398 | + | 144 | Protein_31 | cytoplasmic protein | - |
| LFZ35_RS24785 () | 34614..35405 | - | 792 | WP_015062589.1 | SPI1-associated transcriptional regulator SprB | - |
| LFZ35_RS24790 () | 35402..35854 | - | 453 | WP_015062588.1 | CaiF/GrlA family transcriptional regulator | - |
| LFZ35_RS24795 () | 35847..36062 | - | 216 | WP_088546693.1 | hypothetical protein | - |
| LFZ35_RS26125 () | 36118..36330 | - | 213 | WP_015062586.1 | hypothetical protein | - |
| LFZ35_RS24800 () | 37129..38646 | - | 1518 | Protein_36 | IS66 family transposase | - |
| LFZ35_RS24805 () | 38696..39043 | - | 348 | WP_015062582.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| LFZ35_RS26130 () | 39259..39432 | - | 174 | WP_154074266.1 | transposase | - |
| LFZ35_RS24815 () | 39684..40013 | - | 330 | WP_080102203.1 | nucleoside transporter | - |
| LFZ35_RS24820 () | 40249..41343 | - | 1095 | WP_015062578.1 | DoxX family membrane protein | - |
| LFZ35_RS26135 () | 42073..42243 | + | 171 | WP_157720279.1 | hypothetical protein | - |
| LFZ35_RS26335 () | 43278..43624 | + | 347 | Protein_42 | hypothetical protein | - |
| LFZ35_RS24835 () | 43853..44428 | - | 576 | WP_088546694.1 | hypothetical protein | - |
| LFZ35_RS24840 () | 44609..47020 | - | 2412 | Protein_44 | fimbria/pilus outer membrane usher protein | - |
| LFZ35_RS24845 () | 47034..47306 | + | 273 | Protein_45 | DUF4113 domain-containing protein | - |
| LFZ35_RS24850 () | 47455..47793 | - | 339 | WP_015062732.1 | hypothetical protein | - |
| LFZ35_RS24855 () | 47862..48501 | - | 640 | Protein_47 | ParA family protein | - |
| LFZ35_RS24860 () | 49029..49892 | + | 864 | WP_088546695.1 | RepB family plasmid replication initiator protein | - |
| LFZ35_RS26340 () | 50126..50524 | - | 399 | Protein_49 | tyrosine-type recombinase/integrase | - |
| LFZ35_RS26345 () | 50525..50965 | - | 441 | Protein_50 | transposase | - |
| LFZ35_RS24875 () | 51015..51362 | - | 348 | WP_015062727.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| LFZ35_RS24880 () | 51359..51751 | - | 393 | WP_079964202.1 | IS66 family insertion sequence hypothetical protein | - |
| LFZ35_RS24885 () | 52024..55170 | - | 3147 | WP_015062725.1 | CusA/CzcA family heavy metal efflux RND transporter | - |
| LFZ35_RS24890 () | 55181..56464 | - | 1284 | WP_015062724.1 | efflux RND transporter periplasmic adaptor subunit | - |
| LFZ35_RS24895 () | 56568..56924 | - | 357 | WP_015062723.1 | cation efflux system protein CusF | - |
| LFZ35_RS24900 () | 56958..58343 | - | 1386 | WP_079963718.1 | efflux transporter outer membrane subunit | - |
| LFZ35_RS24905 () | 58529..59212 | + | 684 | WP_015062721.1 | copper/silver response regulator transcription factor | - |
| LFZ35_RS24910 () | 59202..60662 | + | 1461 | WP_015062720.1 | Cu(+)/Ag(+) sensor histidine kinase | - |
| LFZ35_RS24915 () | 60841..61338 | + | 498 | WP_015062719.1 | hypothetical protein | - |
| LFZ35_RS24920 () | 61560..62018 | - | 459 | Protein_60 | MFS transporter | - |
| LFZ35_RS24925 () | 62271..62894 | + | 624 | WP_015062717.1 | recombinase family protein | - |
| LFZ35_RS24930 () | 62923..65914 | + | 2992 | Protein_62 | Tn3 family transposase | - |
| LFZ35_RS26145 () | 66021..66266 | - | 246 | WP_154074369.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| LFZ35_RS24935 () | 66584..66964 | - | 381 | WP_157720283.1 | hypothetical protein | - |
| LFZ35_RS24940 () | 67033..67359 | - | 327 | WP_088546696.1 | fimbria/pilus periplasmic chaperone | - |
| LFZ35_RS24945 () | 67478..67978 | - | 501 | WP_088546697.1 | hypothetical protein | - |
| LFZ35_RS26150 () | 68024..69088 | - | 1065 | WP_157720281.1 | fimbria/pilus outer membrane usher protein | - |
| LFZ35_RS26155 () | 69085..70119 | - | 1035 | WP_157720286.1 | fimbria/pilus outer membrane usher protein | - |
| LFZ35_RS24955 () | 70132..70368 | - | 237 | WP_088546698.1 | hypothetical protein | - |
| LFZ35_RS24960 () | 70513..72510 | + | 1998 | Protein_70 | Tn3 family transposase | - |
| LFZ35_RS26160 () | 72617..72862 | - | 246 | WP_154074369.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| LFZ35_RS24965 () | 73180..73956 | - | 777 | WP_015062712.1 | fimbria/pilus periplasmic chaperone | - |
| LFZ35_RS24970 () | 74075..74575 | - | 501 | WP_088546697.1 | hypothetical protein | - |
| LFZ35_RS24975 () | 74621..77236 | - | 2616 | WP_015062711.1 | fimbria/pilus outer membrane usher protein | - |
| LFZ35_RS24980 () | 77925..78385 | + | 461 | Protein_75 | transposase | - |
| LFZ35_RS24985 () | 78385..78804 | - | 420 | Protein_76 | transposase | - |
| LFZ35_RS24990 () | 79391..80125 | + | 735 | WP_015062707.1 | helix-turn-helix domain-containing protein | - |
| LFZ35_RS24995 () | 80281..80907 | + | 627 | WP_015062706.1 | YfdX family protein | - |
| LFZ35_RS25005 () | 81555..81749 | - | 195 | WP_015062704.1 | hypothetical protein | - |
| LFZ35_RS26165 () | 82070..82288 | + | 219 | WP_015062703.1 | KUP/HAK/KT family potassium transporter | - |
| LFZ35_RS25010 () | 82435..83424 | + | 990 | WP_088546712.1 | AraC family transcriptional regulator | - |
| LFZ35_RS25015 () | 84183..84599 | - | 417 | WP_015062700.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LFZ35_RS25020 () | 84596..84826 | - | 231 | WP_088546699.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LFZ35_RS25025 () | 85571..85789 | + | 219 | WP_015062698.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LFZ35_RS25030 () | 85791..86096 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LFZ35_RS25035 () | 86098..86388 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| LFZ35_RS25040 () | 86385..86911 | + | 527 | Protein_87 | cytoplasmic protein | - |
| LFZ35_RS25045 () | 86924..87706 | + | 783 | WP_015062695.1 | site-specific integrase | - |
| LFZ35_RS25050 () | 87857..88786 | - | 930 | WP_015062694.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| LFZ35_RS25055 () | 89233..89523 | - | 291 | WP_088546700.1 | hypothetical protein | - |
| LFZ35_RS25060 () | 89531..89797 | - | 267 | WP_001749326.1 | hypothetical protein | - |
| LFZ35_RS25065 () | 89811..90098 | - | 288 | WP_015062691.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LFZ35_RS25070 () | 90095..90346 | - | 252 | WP_015062690.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LFZ35_RS25075 () | 90535..90765 | - | 231 | WP_015062689.1 | hypothetical protein | - |
| LFZ35_RS25080 () | 90859..91050 | - | 192 | WP_015062688.1 | hypothetical protein | - |
| LFZ35_RS25090 () | 91789..92655 | + | 867 | WP_015062685.1 | AAA family ATPase | - |
| LFZ35_RS25095 () | 92655..93686 | + | 1032 | WP_015062684.1 | ParB/RepB/Spo0J family partition protein | - |
| LFZ35_RS25100 () | 93686..94123 | + | 438 | WP_088546702.1 | hypothetical protein | - |
| LFZ35_RS26350 () | 94120..94443 | + | 324 | WP_015062682.1 | hypothetical protein | - |
| LFZ35_RS25110 () | 94482..95756 | - | 1275 | WP_015062681.1 | Y-family DNA polymerase | - |
| LFZ35_RS25115 () | 95756..96178 | - | 423 | WP_015062680.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LFZ35_RS25120 () | 96358..97029 | - | 672 | WP_088546713.1 | SOS response-associated peptidase family protein | - |
| LFZ35_RS25125 () | 97389..98066 | + | 678 | WP_015062675.1 | DNA methylase | - |
| LFZ35_RS25130 () | 98066..98287 | + | 222 | WP_001104890.1 | hypothetical protein | - |
| LFZ35_RS25135 () | 98298..98702 | + | 405 | WP_015062674.1 | DUF1380 domain-containing protein | - |
| LFZ35_RS25140 () | 98757..99536 | + | 780 | WP_015062673.1 | hypothetical protein | - |
| LFZ35_RS25145 () | 99942..100448 | + | 507 | WP_015062672.1 | antirestriction protein ArdA | - |
| LFZ35_RS25150 () | 100491..100682 | + | 192 | WP_015062671.1 | hypothetical protein | - |
| LFZ35_RS25155 () | 100875..101129 | + | 255 | WP_015062669.1 | DNA polymerase III subunit theta | - |
| LFZ35_RS25160 () | 101164..101481 | + | 318 | WP_015062668.1 | hypothetical protein | - |
| LFZ35_RS25165 () | 101655..102059 | - | 405 | WP_173255705.1 | IS200/IS605 family transposase | - |
| LFZ35_RS25170 () | 102118..103323 | + | 1206 | WP_173255707.1 | transposase | - |
| LFZ35_RS26355 () | 103458..103739 | + | 282 | WP_162798824.1 | hypothetical protein | - |
| LFZ35_RS25180 () | 103974..104528 | + | 555 | WP_015062664.1 | single-stranded DNA-binding protein | - |
| LFZ35_RS25185 () | 104580..104822 | + | 243 | WP_015062663.1 | DUF905 domain-containing protein | - |
| LFZ35_RS25190 () | 104892..106860 | + | 1969 | Protein_116 | ParB/RepB/Spo0J family partition protein | - |
| LFZ35_RS25195 () | 106901..107335 | + | 435 | WP_015062660.1 | conjugation system SOS inhibitor PsiB | - |
| LFZ35_RS25200 () | 107332..107550 | + | 219 | Protein_118 | plasmid SOS inhibition protein A | - |
| LFZ35_RS25205 () | 107595..108803 | - | 1209 | WP_088546704.1 | transposase | - |
| LFZ35_RS26170 () | 108809..108890 | + | 82 | Protein_120 | transposase | - |
| LFZ35_RS25215 () | 109611..110015 | + | 405 | WP_015062655.1 | hypothetical protein | - |
| LFZ35_RS25220 () | 110072..110419 | + | 348 | WP_000550116.1 | hypothetical protein | - |
| LFZ35_RS25225 () | 110514..110660 | + | 147 | WP_001159046.1 | hypothetical protein | - |
| LFZ35_RS25230 () | 110707..111540 | + | 834 | WP_015062654.1 | N-6 DNA methylase | - |
| LFZ35_RS25240 () | 112187..112717 | + | 531 | WP_088546706.1 | antirestriction protein | - |
| LFZ35_RS25245 () | 112728..113183 | - | 456 | WP_015062652.1 | transglycosylase SLT domain-containing protein | - |
| LFZ35_RS25250 () | 113652..114035 | + | 384 | WP_015062650.1 | relaxosome protein TraM | - |
| LFZ35_RS25255 () | 114332..114781 | + | 450 | WP_015062649.1 | helix-turn-helix domain-containing protein | - |
| LFZ35_RS25260 () | 114987..115220 | + | 234 | WP_000662610.1 | TraY domain-containing protein | - |
| LFZ35_RS25265 () | 115337..115696 | + | 360 | WP_001054221.1 | type IV conjugative transfer system pilin TraA | - |
| LFZ35_RS25270 () | 115698..116003 | + | 306 | WP_000398849.1 | type IV conjugative transfer system protein TraL | - |
| LFZ35_RS25275 () | 116023..116586 | + | 564 | WP_015062648.1 | type IV conjugative transfer system protein TraE | - |
| LFZ35_RS25280 () | 116576..117316 | + | 741 | WP_015062647.1 | type-F conjugative transfer system secretin TraK | - |
| LFZ35_RS25285 () | 117303..118664 | + | 1362 | WP_000024509.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LFZ35_RS25290 () | 118776..119000 | + | 225 | WP_008455352.1 | TraR/DksA C4-type zinc finger protein | - |
| LFZ35_RS25295 () | 119111..119725 | + | 615 | WP_015062646.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LFZ35_RS25300 () | 119736..122327 | + | 2592 | WP_015062645.1 | type IV secretion system protein TraC | - |
| LFZ35_RS25305 () | 122324..122788 | + | 465 | WP_015062644.1 | type-F conjugative transfer system protein TrbI | - |
| LFZ35_RS25310 () | 122788..123423 | + | 636 | WP_015062643.1 | type-F conjugative transfer system protein TraW | - |
| LFZ35_RS25315 () | 123420..124415 | + | 996 | WP_015062642.1 | conjugal transfer pilus assembly protein TraU | - |
| LFZ35_RS25320 () | 124426..124794 | + | 369 | WP_015062641.1 | hypothetical protein | - |
| LFZ35_RS25325 () | 124791..125405 | + | 615 | WP_015062640.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LFZ35_RS25330 () | 125402..127231 | + | 1830 | WP_015062639.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LFZ35_RS25335 () | 127228..128007 | + | 780 | WP_015062638.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LFZ35_RS25340 () | 128029..128640 | + | 612 | WP_015062637.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LFZ35_RS25345 () | 128640..130001 | + | 1362 | WP_015062636.1 | F-type conjugal transfer protein TraH | - |
| LFZ35_RS25350 () | 130003..132900 | + | 2898 | WP_015062635.1 | conjugal transfer mating pair stabilization protein TraG | - |
| LFZ35_RS25355 () | 132912..133472 | + | 561 | WP_088546707.1 | protein traS | - |
| LFZ35_RS25360 () | 133650..134387 | + | 738 | WP_088546708.1 | complement resistance protein TraT | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|