MGE detailed information
MGE type: Conjugative plasmid MGE length: 75318 bp
Accession: NZ_CP021938 Location: 1..75318 Organism: Escherichia coli strain AR_0055 Replicon: plasmid unitig_4
Accession: NZ_CP021938 Location: 1..75318 Organism: Escherichia coli strain AR_0055 Replicon: plasmid unitig_4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM434_RS28685 () | 1104..1334 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| AM434_RS29950 () | 1851..2357 | + | 507 | Protein_2 | hypothetical protein | - |
| AM434_RS28705 () | 2336..2527 | - | 192 | WP_001024838.1 | hypothetical protein | - |
| AM434_RS28710 () | 2524..2946 | - | 423 | WP_000271727.1 | DUF1380 family protein | - |
| AM434_RS28715 () | 2993..3295 | - | 303 | WP_072105978.1 | antirestriction protein | - |
| AM434_RS29955 () | 3833..4603 | - | 771 | WP_088251381.1 | hypothetical protein | - |
| AM434_RS28730 () | 4648..5082 | - | 435 | WP_001415415.1 | DUF1380 family protein | - |
| AM434_RS28735 () | 5096..5317 | - | 222 | WP_001104892.1 | hypothetical protein | - |
| AM434_RS28740 () | 5318..6001 | - | 684 | WP_023485601.1 | DNA methylase | - |
| AM434_RS28745 () | 6077..6388 | - | 312 | WP_012680995.1 | hypothetical protein | - |
| AM434_RS28750 () | 6385..7287 | - | 903 | WP_088251389.1 | DUF1281 domain-containing protein | - |
| AM434_RS28760 () | 7711..8133 | - | 423 | WP_000774834.1 | plasmid partitioning/stability family protein | - |
| AM434_RS28765 () | 8136..9116 | - | 981 | WP_001218105.1 | plasmid segregation protein ParM | - |
| AM434_RS28770 () | 9319..9438 | + | 120 | Protein_14 | transposase domain-containing protein | - |
| AM434_RS29960 () | 9506..10072 | - | 567 | WP_000587874.1 | hypothetical protein | - |
| AM434_RS28785 () | 10720..11277 | + | 558 | WP_000103553.1 | hypothetical protein | VF |
| AM434_RS28790 () | 11586..11876 | + | 291 | WP_000754126.1 | DUF2282 domain-containing protein | - |
| AM434_RS28795 () | 11908..12834 | + | 927 | WP_000989040.1 | DUF692 domain-containing protein | - |
| AM434_RS28800 () | 12853..13560 | + | 708 | WP_001467138.1 | DNA-binding domain-containing protein | - |
| AM434_RS28805 () | 13562..14089 | + | 528 | WP_001196880.1 | DoxX family protein | - |
| AM434_RS28810 () | 14422..14784 | - | 363 | WP_000181069.1 | hypothetical protein | - |
| AM434_RS28815 () | 14781..14909 | - | 129 | Protein_22 | DUF2164 family protein | - |
| AM434_RS28825 () | 15169..15270 | - | 102 | Protein_23 | methionyl-tRNA formyltransferase | - |
| AM434_RS28830 () | 15285..15794 | - | 510 | WP_000115001.1 | peptide deformylase | - |
| AM434_RS28840 () | 16322..16723 | + | 402 | WP_050488175.1 | hypothetical protein | - |
| AM434_RS28845 () | 16686..17820 | + | 1135 | Protein_26 | IS91 family transposase IS91 | Transposase |
| AM434_RS28860 () | 18142..18447 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AM434_RS28865 () | 18449..18667 | - | 219 | WP_032256270.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AM434_RS28870 () | 19215..20084 | + | 870 | WP_032256267.1 | hypothetical protein | - |
| AM434_RS28875 () | 20147..20332 | - | 186 | WP_032256266.1 | hypothetical protein | - |
| AM434_RS28885 () | 20556..21146 | + | 591 | WP_032256264.1 | hypothetical protein | - |
| AM434_RS28890 () | 21164..21511 | - | 348 | WP_088251382.1 | hypothetical protein | - |
| AM434_RS28900 () | 21813..22295 | - | 483 | WP_001311056.1 | hypothetical protein | - |
| AM434_RS28905 () | 22412..23260 | - | 849 | WP_032256585.1 | 3'-5' exonuclease | - |
| AM434_RS28910 () | 23306..23587 | - | 282 | WP_000970000.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AM434_RS28915 () | 23584..23853 | - | 270 | WP_000079928.1 | hypothetical protein | Antitoxin Detail |
| AM434_RS28930 () | 24768..25625 | - | 858 | WP_016240488.1 | incFII family plasmid replication initiator RepA | - |
| AM434_RS28935 () | 25618..25692 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| AM434_RS28945 () | 25937..26185 | - | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| AM434_RS28950 () | 26470..26619 | - | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 26664..26723 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 26664..26723 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 26664..26723 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| - () | 26664..26723 | + | 60 | NuclAT_1 | - | Antitoxin Detail |
| AM434_RS28960 () | 26866..27339 | - | 474 | WP_016240489.1 | hypothetical protein | - |
| AM434_RS28965 () | 27494..28084 | - | 591 | WP_042018152.1 | DUF2726 domain-containing protein | - |
| AM434_RS28970 () | 28122..28331 | - | 210 | WP_001369435.1 | hemolysin expression modulator Hha | - |
| AM434_RS28975 () | 28377..28838 | - | 462 | WP_016230918.1 | thermonuclease family protein | - |
| AM434_RS28980 () | 29083..29295 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| AM434_RS28985 () | 29424..29984 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| AM434_RS28990 () | 30087..30947 | - | 861 | WP_000704524.1 | putative protein YcjY | VF |
| AM434_RS28995 () | 31006..31752 | - | 747 | WP_088251383.1 | conjugal transfer pilus acetylase TraX | - |
| AM434_RS29000 () | 31772..37041 | - | 5270 | Protein_49 | Multifunctional conjugation protein TraI | Relaxase |
| AM434_RS29005 () | 37041..39311 | - | 2271 | WP_088251384.1 | type IV conjugative transfer system coupling protein TraD | - |
| AM434_RS29010 () | 39362..40099 | - | 738 | WP_000199905.1 | hypothetical protein | - |
| AM434_RS29015 () | 40302..41033 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| AM434_RS29020 () | 41047..41556 | - | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| AM434_RS29025 () | 41553..44378 | - | 2826 | WP_052983093.1 | conjugal transfer mating pair stabilization protein TraG | - |
| AM434_RS29030 () | 44375..45748 | - | 1374 | WP_014106974.1 | conjugal transfer protein TraH | - |
| AM434_RS29035 () | 45735..46160 | - | 426 | WP_071780479.1 | F-type conjugal transfer protein TrbF | - |
| AM434_RS29040 () | 46108..46455 | - | 348 | WP_071840683.1 | P-type conjugative transfer protein TrbJ | - |
| AM434_RS29045 () | 46385..46930 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AM434_RS29050 () | 46917..47201 | - | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AM434_RS29055 () | 47282..47617 | + | 336 | WP_000736414.1 | hypothetical protein | - |
| AM434_RS29060 () | 47598..47939 | - | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| AM434_RS29065 () | 47953..48696 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AM434_RS29070 () | 48689..48946 | - | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| AM434_RS29075 () | 48973..50823 | - | 1851 | WP_088251385.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AM434_RS29080 () | 50820..51458 | - | 639 | WP_060578158.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AM434_RS29085 () | 51467..51772 | - | 306 | WP_000224418.1 | hypothetical protein | - |
| AM434_RS29090 () | 51802..52119 | - | 318 | Protein_67 | TraU family protein | - |
| AM434_RS29095 () | 52288..52596 | - | 309 | WP_001617739.1 | hypothetical protein | - |
| AM434_RS29100 () | 52623..53615 | - | 993 | WP_000830849.1 | conjugal transfer pilus assembly protein TraU | - |
| AM434_RS29105 () | 53612..54244 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| AM434_RS29110 () | 54241..54627 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| AM434_RS29115 () | 54624..57254 | - | 2631 | WP_000069772.1 | type IV secretion system protein TraC | - |
| AM434_RS29710 () | 57380..57727 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| AM434_RS29125 () | 57755..57973 | - | 219 | WP_052983091.1 | hypothetical protein | - |
| AM434_RS29130 () | 58072..58545 | - | 474 | WP_033807958.1 | hypothetical protein | - |
| AM434_RS29135 () | 58538..58951 | - | 414 | WP_000549589.1 | hypothetical protein | - |
| AM434_RS29140 () | 58944..59165 | - | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| AM434_RS29145 () | 59300..59815 | - | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AM434_RS29150 () | 59812..60180 | - | 369 | WP_001681801.1 | conjugal transfer protein TrbD | - |
| AM434_RS29155 () | 60119..60709 | - | 591 | WP_000002784.1 | conjugal transfer protein TraP | - |
| AM434_RS29160 () | 60699..62126 | - | 1428 | WP_052983112.1 | conjugal transfer protein TraB | - |
| AM434_RS29165 () | 62126..62854 | - | 729 | WP_001230769.1 | type-F conjugative transfer system secretin TraK | - |
| AM434_RS29170 () | 62841..63407 | - | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| AM434_RS29175 () | 63429..63740 | - | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| AM434_RS29180 () | 63755..64114 | - | 360 | WP_001098994.1 | type IV conjugative transfer system pilin TraA | - |
| AM434_RS29185 () | 64148..64387 | - | 240 | WP_042018283.1 | conjugal transfer relaxosome protein TraY | - |
| AM434_RS29190 () | 64495..65142 | - | 648 | WP_000332523.1 | transcriptional regulator TraJ family protein | - |
| AM434_RS29195 () | 65334..65717 | - | 384 | WP_001151529.1 | relaxosome protein TraM | - |
| AM434_RS29200 () | 66050..66640 | + | 591 | WP_000252683.1 | hypothetical protein | VF |
| AM434_RS29205 () | 66937..67758 | - | 822 | WP_001234445.1 | DUF945 domain-containing protein | - |
| AM434_RS29210 () | 67869..68165 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| AM434_RS29965 () | 68557..68761 | + | 205 | Protein_92 | pilus protein | - |
| AM434_RS29225 () | 69062..69220 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 69264..69488 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 69264..69488 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 69264..69488 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 69264..69488 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| AM434_RS29230 () | 69300..69479 | + | 180 | WP_001309233.1 | hypothetical protein | - |
| AM434_RS29235 () | 69500..70219 | - | 720 | WP_001276217.1 | plasmid SOS inhibition protein A | - |
| AM434_RS29240 () | 70216..70650 | - | 435 | WP_052983109.1 | conjugation system SOS inhibitor PsiB | - |
| AM434_RS29245 () | 70719..72683 | - | 1965 | WP_001537566.1 | ParB/RepB/Spo0J family partition protein | - |
| AM434_RS29250 () | 72744..72977 | - | 234 | WP_033551487.1 | DUF905 family protein | - |
| AM434_RS29255 () | 73035..73562 | - | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| AM434_RS29265 () | 73864..74313 | + | 450 | WP_088251387.1 | hypothetical protein | - |
| AM434_RS29275 () | 74399..74962 | - | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|