MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 91823 bp
Accession: NZ_CP021661 Location: 1..91823 Organism: Candidatus Fukatsuia symbiotica strain 5D Replicon: plasmid p5D_Fsymbiotica-2
Accession: NZ_CP021661 Location: 1..91823 Organism: Candidatus Fukatsuia symbiotica strain 5D Replicon: plasmid p5D_Fsymbiotica-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCS41_RS14500 () | 1..1046 | + | 1046 | WP_119797894.1 | hypothetical protein | - |
| CCS41_RS15800 () | 1148..1324 | + | 177 | WP_162860125.1 | hypothetical protein | VF |
| CCS41_RS14505 () | 1369..1602 | + | 234 | WP_119797895.1 | transcriptional regulator | - |
| CCS41_RS14510 () | 1860..2717 | + | 858 | WP_119797896.1 | replication protein RepA | - |
| CCS41_RS14515 () | 3066..4169 | - | 1104 | WP_119797760.1 | ISAs1 family transposase ISAcr3 | Transposase |
| CCS41_RS14520 () | 4286..4843 | - | 558 | WP_119797897.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| CCS41_RS14525 () | 4845..5219 | - | 375 | WP_119797898.1 | DUF5615 family PIN-like protein | - |
| CCS41_RS14530 () | 5216..5446 | - | 231 | WP_119797899.1 | DUF433 domain-containing protein | - |
| CCS41_RS14535 () | 5702..6805 | + | 1104 | WP_119797760.1 | ISAs1 family transposase ISAcr3 | Transposase |
| CCS41_RS14540 () | 7154..8011 | - | 858 | WP_119797896.1 | replication protein RepA | - |
| CCS41_RS14545 () | 8269..8502 | - | 234 | WP_119797895.1 | transcriptional regulator | - |
| CCS41_RS15805 () | 8547..8723 | - | 177 | WP_162860125.1 | hypothetical protein | VF |
| CCS41_RS14550 () | 8825..10183 | - | 1359 | WP_119797900.1 | hypothetical protein | - |
| CCS41_RS14555 () | 10232..10504 | - | 273 | WP_119797975.1 | arylsulfatase regulator | - |
| CCS41_RS14560 () | 10771..11793 | + | 1023 | WP_119797901.1 | IS630 family transposase ISVa15 | Transposase |
| CCS41_RS14565 () | 11796..11948 | - | 153 | Protein_15 | virulence factor | - |
| CCS41_RS14570 () | 11960..12160 | - | 201 | WP_119797902.1 | DUF5397 family protein | - |
| CCS41_RS14575 () | 12259..15075 | - | 2817 | WP_162860126.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobB | - |
| CCS41_RS14580 () | 15065..15415 | - | 351 | WP_119797903.1 | hypothetical protein | Relaxase |
| CCS41_RS14585 () | 15721..16134 | + | 414 | WP_119797904.1 | hypothetical protein | - |
| CCS41_RS14590 () | 16136..16843 | + | 708 | WP_119797905.1 | plasmid stability protein StbB | - |
| CCS41_RS14595 () | 16853..17449 | + | 597 | WP_119797906.1 | hypothetical protein | - |
| CCS41_RS14600 () | 17541..17846 | - | 306 | WP_119797907.1 | hypothetical protein | - |
| CCS41_RS14605 () | 17892..18545 | - | 654 | WP_119797908.1 | ParA family protein | - |
| CCS41_RS14610 () | 18675..18920 | - | 246 | WP_119797909.1 | hypothetical protein | - |
| CCS41_RS14615 () | 18886..21021 | - | 2136 | WP_119797910.1 | type IA DNA topoisomerase | - |
| CCS41_RS14620 () | 21079..21459 | + | 381 | WP_119797911.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CCS41_RS14625 () | 21440..21775 | + | 336 | WP_119797912.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CCS41_RS14630 () | 21827..22333 | - | 507 | WP_119797913.1 | hypothetical protein | VF |
| CCS41_RS14635 () | 22349..22969 | - | 621 | WP_205411528.1 | prepilin peptidase | - |
| CCS41_RS14640 () | 22972..23403 | - | 432 | WP_119797915.1 | type IV pilus biogenesis protein PilM | - |
| CCS41_RS14645 () | 23443..24714 | - | 1272 | WP_119797916.1 | hypothetical protein | VF |
| CCS41_RS14650 () | 24730..25689 | - | 960 | WP_119797917.1 | putative protein YggR | VF |
| CCS41_RS14655 () | 25699..26211 | - | 513 | WP_119797976.1 | pilus assembly protein PilS | - |
| CCS41_RS14660 () | 26250..26759 | - | 510 | WP_119797918.1 | hypothetical protein | VF |
| CCS41_RS14665 () | 26772..27835 | - | 1064 | Protein_35 | type II secretion system F family protein | - |
| CCS41_RS14670 () | 27828..29369 | - | 1542 | WP_119797919.1 | Type II secretion system protein E | VF |
| CCS41_RS14675 () | 29366..29809 | - | 444 | WP_119797920.1 | type IV pilus biogenesis protein PilP | - |
| CCS41_RS14680 () | 29796..31114 | - | 1319 | Protein_38 | type 4b pilus protein PilO2 | - |
| CCS41_RS14685 () | 31104..31247 | - | 144 | WP_119797977.1 | Arc family DNA-binding protein | - |
| CCS41_RS14690 () | 31379..31657 | + | 279 | WP_119797921.1 | BrnT family toxin | - |
| CCS41_RS14695 () | 31632..31919 | + | 288 | WP_119797922.1 | BrnA antitoxin family protein | - |
| CCS41_RS14700 () | 31929..32147 | - | 219 | WP_119797923.1 | hypothetical protein | - |
| CCS41_RS14705 () | 32336..32623 | + | 288 | WP_119797924.1 | CopG family transcriptional regulator | - |
| CCS41_RS14710 () | 32624..32923 | + | 300 | WP_119797925.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CCS41_RS14715 () | 32920..34619 | - | 1700 | Protein_45 | Outer membrane lipoprotein BfpB | VF |
| CCS41_RS14720 () | 34621..35325 | - | 705 | WP_119797926.1 | hypothetical protein | VF |
| CCS41_RS14725 () | 35415..35729 | - | 315 | WP_119797927.1 | conjugal transfer protein | - |
| CCS41_RS14730 () | 35753..37303 | - | 1551 | WP_119797978.1 | type IV secretory system conjugative DNA transfer family protein | - |
| CCS41_RS14735 () | 37357..37697 | - | 341 | Protein_49 | hypothetical protein | - |
| CCS41_RS14740 () | 37685..38736 | - | 1052 | Protein_50 | Type IV secretion system protein VirB11 | VF |
| CCS41_RS14745 () | 38741..39313 | - | 573 | WP_119797928.1 | Type IV secretion system protein virB10 | VF |
| CCS41_RS15810 () | 39601..39885 | + | 285 | WP_162860127.1 | hypothetical protein | - |
| CCS41_RS14760 () | 39981..40784 | - | 804 | WP_119797931.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| CCS41_RS14765 () | 40789..41589 | - | 801 | WP_119797932.1 | Type IV secretion system protein virB8 | VF |
| CCS41_RS14770 () | 41802..42752 | - | 951 | WP_119797933.1 | type IV secretion system protein | - |
| CCS41_RS14775 () | 42776..43117 | - | 342 | WP_039908292.1 | hypothetical protein | - |
| CCS41_RS14780 () | 43158..43535 | - | 378 | WP_119797934.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CCS41_RS14785 () | 43529..43924 | - | 396 | WP_119797935.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| CCS41_RS14790 () | 43921..44157 | - | 237 | WP_006705272.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| CCS41_RS14795 () | 44239..44496 | - | 258 | WP_119797936.1 | hypothetical protein | - |
| CCS41_RS14800 () | 44537..44947 | - | 411 | WP_119797937.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| CCS41_RS14805 () | 44944..45255 | - | 312 | WP_119797938.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| CCS41_RS14810 () | 45333..45566 | - | 234 | WP_119797939.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| CCS41_RS14815 () | 45631..46323 | - | 693 | WP_119797940.1 | type IV secretion system protein | - |
| CCS41_RS14820 () | 46320..48716 | - | 2397 | WP_119797941.1 | VirB4 family type IV secretion system protein | - |
| CCS41_RS14825 () | 48673..49043 | - | 371 | Protein_66 | VirB3 family type IV secretion system protein | - |
| CCS41_RS14830 () | 49040..49384 | - | 345 | WP_119797942.1 | hypothetical protein | - |
| CCS41_RS14835 () | 49338..50030 | - | 693 | WP_205411523.1 | Type IV secretion system protein virB1 | VF |
| CCS41_RS14840 () | 50074..50298 | - | 225 | WP_119797943.1 | hypothetical protein | - |
| CCS41_RS14845 () | 50346..50645 | - | 300 | WP_119797944.1 | hypothetical protein | - |
| CCS41_RS16195 () | 50977..51234 | - | 258 | WP_205411524.1 | hypothetical protein | - |
| CCS41_RS14850 () | 51434..52291 | - | 858 | WP_119797945.1 | replication protein RepA | - |
| CCS41_RS14855 () | 52809..53102 | - | 294 | WP_205411525.1 | helix-turn-helix transcriptional regulator | - |
| CCS41_RS14860 () | 53148..53786 | - | 639 | WP_119797947.1 | helix-turn-helix domain-containing protein | - |
| CCS41_RS14865 () | 53989..54534 | - | 546 | WP_119797980.1 | plasmid replication initiator-like protein | - |
| CCS41_RS14870 () | 55318..55524 | - | 207 | WP_119797948.1 | hypothetical protein | - |
| CCS41_RS15815 () | 55523..55822 | + | 300 | WP_205411526.1 | hypothetical protein | - |
| CCS41_RS15820 () | 56042..56197 | - | 156 | WP_162860129.1 | hypothetical protein | - |
| CCS41_RS14875 () | 56194..56898 | - | 705 | WP_119797949.1 | PAS domain-containing protein | - |
| CCS41_RS14880 () | 58011..58739 | + | 729 | WP_119797950.1 | PAS domain-containing protein | - |
| CCS41_RS14885 () | 58747..59506 | - | 760 | Protein_81 | IS5 family transposase IS1355 | Transposase |
| CCS41_RS14890 () | 59894..60172 | + | 279 | WP_119797951.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| CCS41_RS14895 () | 60169..60693 | + | 525 | WP_119797952.1 | GNAT family N-acetyltransferase | Toxin Detail |
| CCS41_RS14900 () | 60694..61305 | + | 612 | WP_119797953.1 | hypothetical protein | - |
| CCS41_RS14910 () | 61512..61913 | - | 402 | WP_119797954.1 | type II toxin-antitoxin system VapC family toxin | - |
| CCS41_RS14915 () | 61910..62167 | - | 258 | WP_119797955.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| CCS41_RS14920 () | 62326..63285 | - | 960 | WP_162859989.1 | IS110 family transposase ISStma4 | Transposase |
| CCS41_RS14925 () | 63546..63905 | + | 360 | Protein_88 | ISKra4 family transposase ISXne1 | Transposase |
| CCS41_RS14930 () | 64239..64568 | - | 330 | WP_119797956.1 | HigA family addiction module antidote protein | - |
| CCS41_RS14935 () | 64581..64871 | - | 291 | WP_119797981.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CCS41_RS14940 () | 65141..66472 | - | 1332 | WP_162860130.1 | hypothetical protein | - |
| CCS41_RS14945 () | 66633..67271 | - | 639 | WP_119797982.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| CCS41_RS14950 () | 67431..68540 | + | 1110 | WP_119797958.1 | DUF4158 domain-containing protein | - |
| CCS41_RS14955 () | 68565..70490 | + | 1926 | WP_119797959.1 | Tn3 family transposase TnpA_ISVsa19 | Transposase |
| CCS41_RS14960 () | 70538..70876 | + | 339 | WP_119797960.1 | IS3 family transposase ISMca2 | Transposase |
| CCS41_RS14965 () | 70939..71927 | + | 989 | Protein_96 | Tn3 family transposase ISPsy42 | Transposase |
| CCS41_RS14975 () | 72334..73071 | - | 738 | WP_119797962.1 | hypothetical protein | - |
| CCS41_RS14980 () | 73107..75095 | - | 1989 | WP_119797963.1 | phage tail protein | - |
| CCS41_RS14985 () | 75427..75661 | + | 235 | Protein_99 | ribbon-helix-helix protein, CopG family | - |
| CCS41_RS14990 () | 75651..75935 | + | 285 | Protein_100 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CCS41_RS14995 () | 76204..76605 | - | 402 | WP_119797964.1 | transposase zinc-binding domain-containing protein | - |
| CCS41_RS15825 () | 76606..76968 | - | 363 | WP_205411527.1 | hypothetical protein | - |
| CCS41_RS15015 () | 77882..78817 | + | 936 | WP_119797968.1 | replication initiator protein A | - |
| CCS41_RS15020 () | 79093..79851 | - | 759 | WP_119797969.1 | Tn3 family transposase ISPsy42 | Transposase |
| CCS41_RS15025 () | 80007..80591 | + | 585 | WP_119797970.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| CCS41_RS15030 () | 80641..80910 | + | 270 | WP_119797971.1 | hypothetical protein | - |
| CCS41_RS15035 () | 80996..81538 | - | 543 | WP_119797972.1 | PIN domain-containing protein | - |
| CCS41_RS15040 () | 81432..81656 | - | 225 | WP_006705592.1 | hypothetical protein | - |
| CCS41_RS15045 () | 82144..82728 | - | 585 | WP_119797970.1 | Tn3 family transposase TnpR_ISRsp12 | Transposase |
| CCS41_RS15050 () | 82884..83642 | + | 759 | WP_119797969.1 | Tn3 family transposase ISPsy42 | Transposase |
| CCS41_RS15055 () | 83918..84853 | - | 936 | WP_119797968.1 | replication initiator protein A | - |
| CCS41_RS15830 () | 85767..86129 | + | 363 | WP_205411527.1 | hypothetical protein | - |
| CCS41_RS15075 () | 86130..86495 | + | 366 | WP_119797973.1 | transposase zinc-binding domain-containing protein | - |
| CCS41_RS15080 () | 86799..87083 | - | 285 | Protein_114 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CCS41_RS15085 () | 87073..87307 | - | 235 | Protein_115 | ribbon-helix-helix protein, CopG family | - |
| CCS41_RS15090 () | 87639..90740 | + | 3102 | WP_119797974.1 | phage tail protein | - |
| CCS41_RS15095 () | 90809..91823 | - | 1015 | Protein_117 | Tn3 family transposase ISPsy42 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|