MGE detailed information
MGE type: Prophage MGE length: 63136 bp
Accession: NZ_CP021105 Location: 1954984..2018119 Organism: Staphylococcus aureus strain CC5 Replicon: chromosome
Accession: NZ_CP021105 Location: 1954984..2018119 Organism: Staphylococcus aureus strain CC5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B4893_RS09935 () | 1951484..1951774 | - | 291 | WP_000671712.1 | MAP domain-containing protein | - |
| B4893_RS09940 () | 1951789..1953219 | - | 1431 | WP_001557458.1 | extracellular adherence protein Eap/Map | - |
| B4893_RS09945 () | 1953605..1953855 | + | 251 | Protein_1827 | sphingomyelin phosphodiesterase | - |
| B4893_RS09950 () | 1954177..1954356 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| B4893_RS09960 () | 1954671..1954931 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| B4893_RS09965 () | 1954984..1955334 | - | 351 | WP_000702262.1 | Staphylococcal complement inhibitor | VF |
| B4893_RS09970 () | 1956017..1956466 | + | 450 | WP_000727645.1 | Chemotaxis inhibitory protein | VF |
| B4893_RS09975 () | 1956561..1956895 | - | 335 | Protein_1832 | SH3 domain-containing protein | - |
| B4893_RS09990 () | 1957542..1958033 | - | 492 | WP_000920042.1 | Staphylokinase | VF |
| B4893_RS09995 () | 1958228..1958983 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| B4893_RS10000 () | 1958995..1959249 | - | 255 | WP_000611512.1 | phage holin | - |
| B4893_RS10005 () | 1959301..1959408 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 1959330..1959469 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1959330..1959469 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1959330..1959469 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1959330..1959469 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| B4893_RS10010 () | 1959461..1959637 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| B4893_RS10015 () | 1959840..1960613 | - | 774 | WP_025174055.1 | Enterotoxin type E | VF |
| B4893_RS10020 () | 1961034..1961408 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| B4893_RS10025 () | 1961464..1961751 | - | 288 | WP_001262621.1 | hypothetical protein | - |
| B4893_RS10030 () | 1961797..1961949 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| B4893_RS10035 () | 1961942..1965721 | - | 3780 | WP_107383438.1 | hypothetical protein | - |
| B4893_RS10040 () | 1965737..1967221 | - | 1485 | WP_000567396.1 | phage tail family protein | - |
| B4893_RS10045 () | 1967218..1971747 | - | 4530 | Protein_1844 | phage tail tape measure protein | - |
| B4893_RS10050 () | 1971992..1972342 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| B4893_RS10055 () | 1972392..1972616 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| B4893_RS10060 () | 1972658..1973302 | - | 645 | WP_000268740.1 | phage tail protein | - |
| B4893_RS10065 () | 1973303..1973710 | - | 408 | WP_031763502.1 | hypothetical protein | - |
| B4893_RS10070 () | 1973707..1974111 | - | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| B4893_RS10075 () | 1974108..1974470 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| B4893_RS10080 () | 1974454..1974738 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| B4893_RS10085 () | 1974728..1975012 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| B4893_RS10090 () | 1975032..1976177 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| B4893_RS10095 () | 1976201..1976938 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| B4893_RS10100 () | 1976922..1978109 | - | 1188 | WP_000025274.1 | phage portal protein | - |
| B4893_RS10105 () | 1978125..1979786 | - | 1662 | WP_107383439.1 | terminase large subunit | - |
| B4893_RS10110 () | 1979783..1980127 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| B4893_RS10115 () | 1980257..1980556 | - | 300 | WP_000988332.1 | HNH endonuclease | - |
| B4893_RS10120 () | 1980788..1981204 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| B4893_RS10125 () | 1981232..1981432 | - | 201 | WP_001557462.1 | DUF1514 family protein | - |
| B4893_RS10130 () | 1981432..1981581 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| B4893_RS10135 () | 1981578..1981784 | - | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| B4893_RS10140 () | 1981781..1982026 | - | 246 | WP_001282077.1 | hypothetical protein | - |
| B4893_RS10145 () | 1982063..1982599 | - | 537 | WP_000185693.1 | dUTPase | - |
| B4893_RS10150 () | 1982596..1982841 | - | 246 | WP_107383440.1 | DUF1024 family protein | - |
| B4893_RS10155 () | 1982856..1983104 | - | 249 | WP_000178987.1 | hypothetical protein | - |
| B4893_RS10160 () | 1983101..1983358 | - | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| B4893_RS10165 () | 1983358..1983729 | - | 372 | WP_000101279.1 | hypothetical protein | - |
| B4893_RS10170 () | 1983742..1984146 | - | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| B4893_RS10175 () | 1984155..1984373 | - | 219 | WP_000338528.1 | hypothetical protein | - |
| B4893_RS10180 () | 1984380..1985273 | - | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| B4893_RS10185 () | 1985303..1985773 | - | 471 | WP_000934759.1 | single-stranded DNA-binding protein | - |
| B4893_RS10190 () | 1985774..1986391 | - | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| B4893_RS10195 () | 1986472..1987392 | - | 921 | WP_000180600.1 | recombinase RecT | - |
| B4893_RS10200 () | 1987394..1989337 | - | 1944 | WP_000700554.1 | AAA family ATPase | - |
| B4893_RS10205 () | 1989346..1989609 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| B4893_RS10210 () | 1989618..1989878 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
| B4893_RS10215 () | 1989883..1990185 | - | 303 | WP_000165371.1 | DUF2482 family protein | - |
| B4893_RS10220 () | 1990279..1990440 | - | 162 | WP_000048129.1 | DUF1270 family protein | - |
| B4893_RS10225 () | 1990437..1990760 | - | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| B4893_RS10230 () | 1990815..1991195 | + | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| B4893_RS10235 () | 1991182..1991379 | - | 198 | WP_001148856.1 | hypothetical protein | - |
| B4893_RS10240 () | 1991395..1992147 | - | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| B4893_RS10245 () | 1992198..1992527 | + | 330 | WP_000128909.1 | hypothetical protein | - |
| B4893_RS10250 () | 1992516..1992731 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| B4893_RS10255 () | 1992747..1993010 | - | 264 | Protein_1886 | helix-turn-helix transcriptional regulator | - |
| B4893_RS10260 () | 1993007..1993181 | - | 175 | Protein_1887 | transcriptional regulator | - |
| B4893_RS10265 () | 1993144..1993857 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| B4893_RS10270 () | 1993873..1994805 | + | 933 | WP_000759682.1 | ATP-dependent helicase | - |
| B4893_RS10275 () | 1994811..1995152 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| B4893_RS10280 () | 1995356..1995538 | + | 183 | WP_000694772.1 | hypothetical protein | - |
| B4893_RS10285 () | 1995638..1996621 | + | 984 | WP_001558608.1 | Putative teichuronic acid biosynthesis glycosyltransferase TuaG | VF |
| B4893_RS10290 () | 1996632..1996874 | + | 243 | WP_000427213.1 | hypothetical protein | - |
| B4893_RS10295 () | 1996937..1997974 | + | 1038 | WP_000857180.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| B4893_RS10300 () | 1998025..1998855 | + | 831 | Protein_1895 | Phospholipase C | VF |
| B4893_RS10305 () | 1999093..2000109 | - | 1017 | WP_000595392.1 | putative leukocidin-like protein 1 | VF |
| B4893_RS10310 () | 2000131..2001186 | - | 1056 | WP_000791411.1 | putative leukocidin-like protein 2 | VF |
| B4893_RS10315 () | 2001622..2002845 | + | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| B4893_RS10320 () | 2003289..2004596 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| B4893_RS10330 () | 2005593..2006315 | + | 723 | WP_094970119.1 | Enterotoxin type A | VF |
| B4893_RS10335 () | 2006484..2007284 | - | 801 | WP_000278088.1 | Enterotoxin type C-3 | VF |
| B4893_RS10340 () | 2008072..2008632 | + | 561 | WP_001035616.1 | DUF4888 domain-containing protein | - |
| B4893_RS10345 () | 2009510..2010214 | + | 705 | WP_001035599.1 | Toxic shock syndrome toxin-1 | VF |
| B4893_RS10350 () | 2010369..2010938 | - | 570 | WP_107383441.1 | terminase small subunit | - |
| B4893_RS10355 () | 2010935..2011276 | - | 342 | WP_031885614.1 | hypothetical protein | - |
| B4893_RS10360 () | 2011279..2011806 | - | 528 | WP_094970142.1 | spore coat protein | - |
| B4893_RS10365 () | 2011857..2012075 | - | 219 | WP_000448775.1 | capsid morphogenesis B protein | - |
| B4893_RS10370 () | 2012093..2012671 | - | 579 | WP_000846284.1 | hypothetical protein | - |
| B4893_RS10375 () | 2012683..2013024 | - | 342 | WP_107383442.1 | pathogenicity island protein | - |
| B4893_RS10380 () | 2013473..2014115 | - | 643 | Protein_1910 | pathogenicity island protein | - |
| B4893_RS10385 () | 2014112..2014294 | - | 183 | Protein_1911 | pathogenicity island protein | - |
| B4893_RS10390 () | 2014341..2015210 | - | 870 | WP_107383443.1 | primase alpha helix C-terminal domain-containing protein | - |
| B4893_RS10395 () | 2015298..2015585 | - | 288 | WP_107383456.1 | DUF1474 family protein | - |
| B4893_RS10400 () | 2015743..2015889 | - | 147 | WP_000784893.1 | hypothetical protein | - |
| B4893_RS10405 () | 2015901..2016098 | - | 198 | Protein_1915 | winged helix-turn-helix domain-containing protein | - |
| B4893_RS10410 () | 2016143..2017759 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| B4893_RS10415 () | 2017835..2018119 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| B4893_RS10420 () | 2018294..2019037 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| B4893_RS10425 () | 2019062..2020321 | - | 1260 | WP_000120297.1 | hypothetical protein | - |
| B4893_RS10430 () | 2020518..2021144 | + | 627 | WP_000522381.1 | nitroreductase family protein | - |
| B4893_RS10435 () | 2021505..2022290 | + | 786 | WP_000867951.1 | carbon-nitrogen family hydrolase | - |
| B4893_RS10440 () | 2022890..2023024 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA6360, TA10116, TA20387 | NC_002745 | 2006528..2074317 | 0.004 |