MGE detailed information
MGE type: Genomic_island MGE length: 43228 bp
Accession: NZ_CP020863 Location: 1875063..1918290 Organism: Streptococcus suis strain SC19 Replicon: chromosome
Accession: NZ_CP020863 Location: 1875063..1918290 Organism: Streptococcus suis strain SC19 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B9H01_RS09460 () | 1871005..1874124 | + | 3120 | WP_012775354.1 | LPXTG cell wall anchor domain-containing protein | - |
| B9H01_RS09465 () | 1874204..1875070 | + | 867 | WP_012027852.1 | Hsp33 family molecular chaperone HslO | - |
| B9H01_RS09470 () | 1875063..1876067 | + | 1005 | WP_012775355.1 | tRNA dihydrouridine synthase DusB | - |
| B9H01_RS09475 () | 1876213..1876986 | - | 774 | WP_012027854.1 | NUDIX hydrolase | - |
| B9H01_RS09480 () | 1876979..1877800 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| B9H01_RS09485 () | 1877810..1878847 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| B9H01_RS09490 () | 1878961..1881414 | - | 2454 | WP_012027858.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| B9H01_RS09495 () | 1881420..1881878 | - | 459 | WP_012027859.1 | transcriptional regulator | - |
| B9H01_RS09500 () | 1882028..1882366 | + | 339 | WP_012027860.1 | thiol reductase thioredoxin | - |
| B9H01_RS09505 () | 1882366..1883067 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| B9H01_RS09510 () | 1883330..1884370 | - | 1041 | WP_012027862.1 | elongation factor Ts | - |
| B9H01_RS09515 () | 1884526..1885302 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| B9H01_RS09520 () | 1885649..1886161 | - | 513 | WP_012027864.1 | adenylate kinase | - |
| B9H01_RS09530 () | 1886815..1891893 | - | 5079 | WP_012775357.1 | S8 family serine peptidase | - |
| B9H01_RS09535 () | 1892037..1892576 | - | 540 | WP_002940254.1 | transcription termination/antitermination protein NusG | - |
| B9H01_RS09540 () | 1892686..1892862 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| B9H01_RS09545 () | 1892872..1893024 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| B9H01_RS09550 () | 1893058..1895271 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| B9H01_RS09555 () | 1895424..1896392 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| B9H01_RS09560 () | 1896394..1897260 | + | 867 | WP_012027870.1 | RluA family pseudouridine synthase | - |
| B9H01_RS09565 () | 1897287..1898099 | - | 813 | WP_002938438.1 | pur operon repressor | - |
| B9H01_RS09570 () | 1898201..1899067 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| B9H01_RS09575 () | 1899067..1900008 | - | 942 | WP_012775359.1 | 3'-5' exoribonuclease YhaM family protein | - |
| B9H01_RS09580 () | 1899998..1901236 | - | 1239 | WP_012027874.1 | DNA recombination protein RmuC | - |
| B9H01_RS09585 () | 1901237..1901869 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| B9H01_RS09590 () | 1901862..1902521 | - | 660 | WP_012027876.1 | Ribulose-phosphate 3-epimerase | VF |
| B9H01_RS09595 () | 1902536..1903411 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| B9H01_RS09605 () | 1904308..1905885 | - | 1578 | WP_012027878.1 | ABC transporter ATP-binding protein/permease | - |
| B9H01_RS09610 () | 1905882..1907129 | - | 1248 | WP_012027879.1 | radical SAM protein | - |
| B9H01_RS09615 () | 1907492..1908355 | - | 864 | WP_012027880.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| B9H01_RS09625 () | 1908845..1911289 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| B9H01_RS09630 () | 1911302..1913032 | - | 1731 | WP_012775361.1 | membrane protein | - |
| B9H01_RS09635 () | 1913397..1914305 | - | 909 | WP_012027884.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| B9H01_RS09640 () | 1914289..1914819 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
| B9H01_RS09645 () | 1914833..1915090 | - | 258 | WP_012775363.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| B9H01_RS09650 () | 1915092..1915352 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| B9H01_RS09655 () | 1915428..1915883 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| B9H01_RS09660 () | 1915890..1916219 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| B9H01_RS09665 () | 1916209..1916496 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| B9H01_RS09670 () | 1916594..1916962 | - | 369 | WP_012775365.1 | hypothetical protein | - |
| B9H01_RS09675 () | 1916955..1917524 | - | 570 | WP_012775366.1 | ribonuclease M5 | - |
| B9H01_RS09680 () | 1917508..1918290 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| B9H01_RS09685 () | 1918397..1918534 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| B9H01_RS09690 () | 1918702..1919697 | - | 996 | WP_012775367.1 | protein jag | - |
| B9H01_RS09695 () | 1919717..1920529 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| B9H01_RS09700 () | 1920513..1920872 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| B9H01_RS09705 () | 1920943..1922337 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0 |