MGE detailed information
MGE type: Genomic_island MGE length: 23031 bp
Accession: NZ_CP020543 Location: 3621751..3644781 Organism: Escherichia coli C Replicon: chromosome
Accession: NZ_CP020543 Location: 3621751..3644781 Organism: Escherichia coli C Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B6N50_RS18500 (B6N50_18500) | 3617066..3618574 | + | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| B6N50_RS18505 (B6N50_18505) | 3618655..3619142 | + | 488 | Protein_3373 | IS3 family transposase | - |
| B6N50_RS18510 (B6N50_18510) | 3619040..3620338 | - | 1299 | WP_000342159.1 | IS256 family transposase | - |
| B6N50_RS23790 | 3620556..3620720 | - | 165 | Protein_3375 | transposase domain-containing protein | - |
| B6N50_RS23795 | 3620665..3620928 | - | 264 | WP_001247776.1 | transposase | - |
| B6N50_RS23800 | 3620943..3621206 | + | 264 | WP_001295708.1 | hypothetical protein | - |
| B6N50_RS18525 (B6N50_18525) | 3621435..3621716 | + | 282 | WP_000643628.1 | helix-turn-helix domain-containing protein | - |
| B6N50_RS18530 (B6N50_18530) | 3621751..3622320 | + | 570 | WP_000350435.1 | hypothetical protein | VF |
| B6N50_RS18535 (B6N50_18535) | 3622426..3625308 | + | 2883 | WP_000101612.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| B6N50_RS18540 (B6N50_18540) | 3625308..3625499 | + | 192 | WP_001295707.1 | hypothetical protein | - |
| B6N50_RS18545 (B6N50_18545) | 3625560..3627288 | + | 1729 | Protein_3382 | ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein | - |
| B6N50_RS18550 (B6N50_18550) | 3627376..3627834 | + | 459 | WP_001275372.1 | Spore protein SP21 | VF |
| B6N50_RS18555 (B6N50_18555) | 3627857..3628771 | + | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| B6N50_RS18560 (B6N50_18560) | 3628874..3629761 | + | 888 | WP_081508864.1 | heat resistance protein YfdX2 | - |
| B6N50_RS18565 (B6N50_18565) | 3629851..3630462 | + | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| B6N50_RS18570 (B6N50_18570) | 3630542..3631687 | + | 1146 | WP_001166995.1 | hypothetical protein | - |
| B6N50_RS18575 (B6N50_18575) | 3631677..3632117 | + | 441 | WP_000786817.1 | heat resistance system thioredoxin Trx-GI | - |
| B6N50_RS18580 (B6N50_18580) | 3632121..3633836 | + | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| B6N50_RS18585 (B6N50_18585) | 3633833..3634330 | + | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| B6N50_RS18590 (B6N50_18590) | 3634308..3635273 | + | 966 | WP_000196689.1 | M48 family metalloprotease | - |
| B6N50_RS18595 (B6N50_18595) | 3635298..3636449 | + | 1152 | WP_000323729.1 | hypothetical protein | VF |
| B6N50_RS18600 (B6N50_18600) | 3636674..3637243 | - | 570 | Protein_3393 | IS5 family transposase ISThi1 | Transposase |
| B6N50_RS18605 (B6N50_18605) | 3637239..3637933 | - | 695 | Protein_3394 | IS5 family transposase ISThi1 | Transposase |
| B6N50_RS18610 (B6N50_18610) | 3638365..3639228 | + | 864 | WP_081508865.1 | GTPase family protein | - |
| B6N50_RS18615 (B6N50_18615) | 3639320..3640141 | + | 822 | WP_000197388.1 | DUF945 domain-containing protein | - |
| B6N50_RS18620 (B6N50_18620) | 3640358..3641059 | + | 702 | WP_000189411.1 | WYL domain-containing protein | - |
| B6N50_RS18625 (B6N50_18625) | 3641100..3641336 | + | 237 | WP_001144031.1 | hypothetical protein | - |
| B6N50_RS18630 (B6N50_18630) | 3641336..3641779 | + | 444 | WP_000649865.1 | hypothetical protein | - |
| B6N50_RS18635 (B6N50_18635) | 3641802..3642269 | + | 468 | WP_001385283.1 | hypothetical protein | - |
| B6N50_RS18640 (B6N50_18640) | 3642346..3642585 | + | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| B6N50_RS18645 (B6N50_18645) | 3642683..3643141 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| B6N50_RS18650 (B6N50_18650) | 3643157..3643633 | + | 477 | WP_000811693.1 | RadC family protein | - |
| B6N50_RS18655 (B6N50_18655) | 3643642..3643863 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| B6N50_RS18660 (B6N50_18660) | 3643882..3644199 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| B6N50_RS18665 (B6N50_18665) | 3644220..3644561 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| B6N50_RS18675 (B6N50_18675) | 3645133..3646386 | - | 1254 | WP_000893272.1 | glutamate-5-semialdehyde dehydrogenase | - |
| B6N50_RS18680 (B6N50_18680) | 3646398..3647501 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| B6N50_RS18685 (B6N50_18685) | 3647789..3648844 | + | 1056 | WP_045145434.1 | phosphoporin PhoE | - |
| B6N50_RS18690 (B6N50_18690) | 3648883..3649284 | - | 402 | WP_047402959.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli strain ABWA45 | Genomic island | TA78589 | NZ_CP022154 | 4235231..4262050 | 0.005 | |
| Escherichia coli strain WG5 | Genomic island | TA86708 | NZ_CP024090 | 3601416..3624446 | 0 | |
| Escherichia coli strain WG5::PA8 | Genomic island | TA198091 | NZ_CP072565 | 3665353..3688383 | 0 | |
| Escherichia coli strain WG5::TT12A | Genomic island | TA198114 | NZ_CP072566 | 3665703..3688058 | 0.001 | |
| Escherichia coli strain NCTC122 | Genomic island | TA293758 | NZ_LT906474 | 3620826..3643856 | 0 |