MGE detailed information
MGE type: Conjugative plasmid MGE length: 130905 bp
Accession: NZ_CP019009 Location: 1..130905 Organism: Escherichia coli strain Ecol_AZ161 Replicon: plasmid pECAZ161_3
Accession: NZ_CP019009 Location: 1..130905 Organism: Escherichia coli strain Ecol_AZ161 Replicon: plasmid pECAZ161_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BE946_RS00005 () | 1..804 | + | 804 | WP_001082319.1 | hypothetical protein | ARG |
| BE946_RS00010 () | 804..1640 | + | 837 | WP_000480972.1 | hypothetical protein | ARG |
| BE946_RS00015 () | 1694..1930 | + | 237 | WP_042005022.1 | hypothetical protein | - |
| BE946_RS00020 () | 1962..2588 | - | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| BE946_RS00025 () | 2694..3893 | + | 1200 | WP_000804064.1 | Multidrug resistance protein MdtG | ARG |
| BE946_RS00030 () | 3925..4785 | - | 861 | WP_000493383.1 | EamA family transporter | - |
| BE946_RS00035 () | 4794..5300 | - | 507 | Protein_6 | transposase | - |
| BE946_RS00040 () | 5353..6057 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| BE946_RS00045 () | 6023..7385 | - | 1363 | Protein_8 | IS1182 family transposase ISCfr1 | Transposase |
| BE946_RS00050 () | 7500..8636 | - | 1137 | WP_000080860.1 | DUF3883 domain-containing protein | - |
| BE946_RS00055 () | 8687..8914 | - | 228 | WP_000248278.1 | hypothetical protein | - |
| BE946_RS00060 () | 8938..9129 | + | 192 | WP_000951934.1 | hypothetical protein | - |
| BE946_RS00065 () | 9611..10003 | - | 393 | Protein_12 | tunicamycin resistance protein | - |
| BE946_RS00075 () | 10068..10772 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| BE946_RS00085 () | 10821..11441 | - | 621 | Protein_14 | IS4 family transposase IS10R | Transposase |
| BE946_RS00090 () | 11551..12513 | - | 963 | Protein_15 | IS4 family transposase IS10R | Transposase |
| BE946_RS00095 () | 12656..13516 | + | 861 | WP_000557454.1 | hypothetical protein | ARG |
| BE946_RS27790 () | 13529..13633 | + | 105 | Protein_17 | tunicamycin resistance protein | - |
| BE946_RS00105 () | 13685..14389 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| BE946_RS00110 () | 14688..15548 | + | 861 | WP_000027057.1 | hypothetical protein | ARG |
| BE946_RS00115 () | 15698..15796 | - | 99 | Protein_20 | IS1 family transposase | - |
| BE946_RS00120 () | 15825..17135 | - | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| BE946_RS00125 () | 17420..17821 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| BE946_RS27565 () | 17754..18011 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| BE946_RS00130 () | 18104..18757 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| BE946_RS00140 () | 19697..20554 | - | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| BE946_RS00145 () | 20547..20621 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| BE946_RS27795 () | 20618..20752 | - | 135 | Protein_27 | protein CopA/IncA | - |
| BE946_RS00155 () | 20858..21112 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| BE946_RS00160 () | 21409..21543 | - | 135 | WP_023144756.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 21588..21648 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 21588..21648 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 21588..21648 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 21588..21648 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| BE946_RS00165 () | 21615..21901 | - | 287 | Protein_30 | DUF2726 domain-containing protein | - |
| BE946_RS00170 () | 21979..23592 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| BE946_RS00175 () | 23623..23973 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| BE946_RS00180 () | 23970..24395 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| BE946_RS00190 () | 24954..25166 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| BE946_RS00195 () | 25257..25682 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| BE946_RS00200 () | 25679..26029 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| BE946_RS00205 () | 26060..27673 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| BE946_RS00210 () | 27837..28397 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| BE946_RS00215 () | 28452..29198 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| BE946_RS00220 () | 29218..34488 | - | 5271 | WP_001617867.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| BE946_RS00225 () | 34488..36713 | - | 2226 | WP_047605472.1 | type IV conjugative transfer system coupling protein TraD | - |
| BE946_RS00230 () | 36710..37489 | - | 780 | WP_000199914.1 | hypothetical protein | - |
| BE946_RS00235 () | 37692..38423 | - | 732 | WP_000850429.1 | complement resistance protein TraT | - |
| BE946_RS00240 () | 38455..38952 | - | 498 | WP_000605862.1 | entry exclusion protein | - |
| BE946_RS00245 () | 38971..41790 | - | 2820 | WP_001007062.1 | conjugal transfer mating pair stabilization protein TraG | - |
| BE946_RS00250 () | 41787..43160 | - | 1374 | WP_000944328.1 | conjugal transfer protein TraH | - |
| BE946_RS00255 () | 43147..43572 | - | 426 | WP_001348758.1 | F-type conjugal transfer protein TrbF | - |
| BE946_RS00260 () | 43520..43867 | - | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| BE946_RS00265 () | 43797..44342 | - | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| BE946_RS00270 () | 44329..44613 | - | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| BE946_RS00275 () | 44740..45060 | - | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
| BE946_RS00280 () | 45108..45805 | - | 698 | Protein_52 | IS1 family transposase IS1G | Transposase |
| BE946_RS00285 () | 45960..46940 | - | 981 | WP_000019450.1 | IS5 family transposase ISKpn26 | Transposase |
| BE946_RS00290 () | 47070..47813 | - | 744 | WP_001030401.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| BE946_RS00295 () | 47806..48063 | - | 258 | WP_000864347.1 | conjugal transfer protein TrbE | - |
| BE946_RS00300 () | 48090..49940 | - | 1851 | WP_000821866.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| BE946_RS00305 () | 49937..50575 | - | 639 | WP_001080259.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| BE946_RS00310 () | 50584..50889 | - | 306 | WP_000224413.1 | hypothetical protein | - |
| BE946_RS00315 () | 50919..51911 | - | 993 | WP_000830190.1 | conjugal transfer pilus assembly protein TraU | - |
| BE946_RS00320 () | 51908..52540 | - | 633 | WP_001203727.1 | type-F conjugative transfer system protein TraW | - |
| BE946_RS00325 () | 52537..52923 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| BE946_RS00330 () | 52920..55547 | - | 2628 | WP_001064258.1 | type IV secretion system protein TraC | - |
| BE946_RS00335 () | 55707..55928 | - | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| BE946_RS00340 () | 56063..56578 | - | 516 | WP_000809886.1 | type IV conjugative transfer system lipoprotein TraV | - |
| BE946_RS00345 () | 56578..56937 | - | 360 | WP_001617876.1 | conjugal transfer protein TrbD | - |
| BE946_RS00350 () | 56876..57463 | - | 588 | WP_013023871.1 | conjugal transfer protein TraP | - |
| BE946_RS00355 () | 57432..58883 | - | 1452 | WP_000146687.1 | conjugal transfer protein TraB | - |
| BE946_RS00360 () | 58883..59587 | - | 705 | WP_148725207.1 | type-F conjugative transfer system secretin TraK | - |
| BE946_RS00365 () | 59598..60164 | - | 567 | WP_000399791.1 | type IV conjugative transfer system protein TraE | - |
| BE946_RS00370 () | 60186..60497 | - | 312 | WP_000012107.1 | type IV conjugative transfer system protein TraL | - |
| BE946_RS00375 () | 60502..60864 | - | 363 | WP_000338606.1 | type IV conjugative transfer system pilin TraA | - |
| BE946_RS00380 () | 60898..61125 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| BE946_RS00385 () | 61213..61890 | - | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| BE946_RS00390 () | 62024..62407 | - | 384 | WP_001151566.1 | relaxosome protein TraM | - |
| BE946_RS00395 () | 62738..63340 | + | 603 | WP_000243712.1 | hypothetical protein | VF |
| BE946_RS00400 () | 63637..64458 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| BE946_RS00405 () | 64577..64864 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| BE946_RS27800 () | 64889..65095 | - | 207 | WP_000275859.1 | hypothetical protein | - |
| BE946_RS00430 () | 65786..65944 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 65988..66028 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 65988..66028 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 65988..66028 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 65988..66028 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 67472..67658 | - | 187 | NuclAT_0 | - | - |
| - () | 67472..67658 | - | 187 | NuclAT_0 | - | - |
| - () | 67472..67658 | - | 187 | NuclAT_0 | - | - |
| - () | 67472..67658 | - | 187 | NuclAT_0 | - | - |
| BE946_RS00445 () | 67670..68389 | - | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| BE946_RS00450 () | 68386..68820 | - | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| BE946_RS00455 () | 68875..70833 | - | 1959 | WP_000117179.1 | ParB/RepB/Spo0J family partition protein | - |
| BE946_RS00460 () | 70899..71132 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| BE946_RS00465 () | 71195..71734 | - | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| BE946_RS00485 () | 72377..72613 | - | 237 | WP_032153960.1 | hypothetical protein | - |
| BE946_RS00490 () | 72639..73202 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| BE946_RS00495 () | 73250..74611 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| BE946_RS00500 () | 74663..74893 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| BE946_RS00515 () | 75928..76119 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| BE946_RS00520 () | 76116..76538 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| BE946_RS00525 () | 76585..76887 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| BE946_RS27570 () | 77427..78203 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| BE946_RS00540 () | 78254..78688 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| BE946_RS00545 () | 78702..78923 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| BE946_RS00550 () | 78924..79607 | - | 684 | WP_000086185.1 | DNA methylase | - |
| BE946_RS00555 () | 79684..79988 | - | 305 | Protein_97 | hypothetical protein | - |
| BE946_RS00560 () | 79992..80894 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| BE946_RS00575 () | 81761..82732 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| BE946_RS00580 () | 82732..83898 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| BE946_RS00585 () | 84486..85241 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| BE946_RS00590 () | 86015..86821 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| BE946_RS00595 () | 86822..87127 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| BE946_RS00600 () | 87129..87347 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| BE946_RS00605 () | 88055..89050 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| BE946_RS00610 () | 89054..89986 | + | 933 | WP_000991832.1 | hypothetical protein | - |
| BE946_RS00615 () | 90123..90820 | - | 698 | Protein_107 | IS1 family transposase IS1G | Transposase |
| BE946_RS00625 () | 90877..93153 | - | 2277 | Protein_108 | type I restriction endonuclease subunit R | - |
| BE946_RS00630 () | 93275..94558 | - | 1284 | WP_001617890.1 | restriction endonuclease subunit S | - |
| BE946_RS00635 () | 94555..96111 | - | 1557 | WP_001617892.1 | type I restriction-modification system subunit M | - |
| BE946_RS00640 () | 96294..96515 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| BE946_RS00645 () | 96515..96895 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| BE946_RS00650 () | 96900..97079 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| BE946_RS00655 () | 97107..97466 | + | 360 | WP_001513660.1 | hypothetical protein | - |
| BE946_RS00660 () | 97390..97803 | + | 414 | Protein_115 | DDE-type integrase/transposase/recombinase | - |
| BE946_RS00665 () | 97753..98070 | - | 318 | WP_001513659.1 | hypothetical protein | - |
| BE946_RS00670 () | 98298..99278 | - | 981 | WP_000019407.1 | IS5 family transposase IS5D | Transposase |
| BE946_RS00675 () | 99522..100925 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| BE946_RS00680 () | 100912..101844 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| BE946_RS00685 () | 101953..102282 | - | 330 | Protein_120 | TOBE domain-containing protein | - |
| BE946_RS00690 () | 102298..102995 | - | 698 | Protein_121 | IS1 family transposase IS1R | Transposase |
| BE946_RS00700 () | 103053..103301 | + | 249 | Protein_122 | abortive infection family protein | - |
| BE946_RS00705 () | 103670..104401 | - | 732 | WP_001617898.1 | hypothetical protein | - |
| BE946_RS00715 () | 105187..106164 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| BE946_RS00720 () | 106449..107189 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| BE946_RS00725 () | 107310..107498 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| BE946_RS00730 () | 107865..109034 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| BE946_RS27045 () | 109260..109435 | - | 176 | Protein_128 | IS3 family transposase | - |
| BE946_RS00735 () | 109881..110153 | - | 273 | WP_001322642.1 | hypothetical protein | VF |
| BE946_RS00740 () | 110678..111114 | - | 437 | Protein_130 | IS3 family transposase IS2 | Transposase |
| BE946_RS00750 () | 111396..113366 | + | 1971 | WP_001298664.1 | Vitamin B12 transporter BtuB | VF |
| BE946_RS00755 () | 113373..114164 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| BE946_RS00760 () | 114227..114835 | - | 609 | Protein_133 | IS66 family transposase ISEc22 | Transposase |
| BE946_RS00765 () | 114903..115685 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| BE946_RS00770 () | 115682..116704 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| BE946_RS00775 () | 116790..117735 | - | 946 | Protein_136 | IS66 family transposase ISEc8 | Transposase |
| BE946_RS00780 () | 117784..117942 | - | 159 | WP_032336940.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| BE946_RS00790 () | 117995..118699 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| BE946_RS00795 () | 118758..119507 | - | 750 | Protein_139 | IS91 family transposase ISAzo26 | Transposase |
| BE946_RS00800 () | 119665..120138 | + | 474 | WP_001389366.1 | hypothetical protein | ARG |
| BE946_RS00805 () | 120269..121057 | + | 789 | WP_000503573.1 | hypothetical protein | ARG |
| BE946_RS00810 () | 121263..121610 | + | 348 | WP_000679427.1 | Spermidine export protein MdtJ | ARG |
| BE946_RS00815 () | 121604..122443 | + | 840 | WP_000259031.1 | hypothetical protein | ARG |
| BE946_RS00825 () | 122571..122774 | + | 204 | WP_000376616.1 | hypothetical protein | - |
| BE946_RS00830 () | 122930..124135 | + | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| BE946_RS00835 () | 124146..124451 | + | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| BE946_RS27575 () | 124495..124560 | + | 66 | Protein_147 | EAL domain-containing protein | - |
| BE946_RS00850 () | 124678..125442 | + | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| BE946_RS00860 () | 125935..126519 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| BE946_RS00865 () | 126519..127757 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| BE946_RS00870 () | 127754..128659 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| BE946_RS00875 () | 128781..129485 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| BE946_RS00880 () | 129546..129722 | + | 177 | Protein_153 | replication protein C | - |
| BE946_RS00890 () | 130030..130845 | + | 816 | WP_001043260.1 | hypothetical protein | ARG |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|