MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 97654 bp
Accession: NZ_CP018954 Location: 1..97654 Organism: Escherichia coli strain Ecol_316 Replicon: plasmid pEC316_3
Accession: NZ_CP018954 Location: 1..97654 Organism: Escherichia coli strain Ecol_316 Replicon: plasmid pEC316_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BE963_RS00005 () | 19..1269 | - | 1251 | Protein_0 | transposase | - |
| BE963_RS00015 () | 1344..2012 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| BE963_RS00020 () | 2048..2284 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| BE963_RS00025 () | 2281..2643 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| BE963_RS00030 () | 2661..4355 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| BE963_RS00035 () | 4407..4829 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| BE963_RS00040 () | 4865..5140 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| BE963_RS00045 () | 5154..5504 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| BE963_RS00050 () | 5576..6010 | + | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| BE963_RS00055 () | 6117..6814 | - | 698 | Protein_9 | IS1 family transposase IS1R | Transposase |
| BE963_RS00065 () | 7063..7464 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| BE963_RS28920 () | 7397..7654 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| BE963_RS00070 () | 7747..8400 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| BE963_RS00090 () | 9614..9826 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| BE963_RS00095 () | 9957..10319 | - | 363 | Protein_14 | fertility inhibition protein FinO | - |
| BE963_RS00100 () | 10315..13566 | - | 3252 | Protein_15 | Multifunctional conjugation protein TraI | Relaxase |
| BE963_RS00105 () | 13566..15275 | - | 1710 | WP_024194459.1 | type IV conjugative transfer system coupling protein TraD | - |
| BE963_RS28325 () | 15259..16869 | - | 1611 | Protein_17 | conjugal transfer mating pair stabilization protein TraG | - |
| BE963_RS28925 () | 16917..17007 | - | 91 | Protein_18 | conjugal transfer protein TraB | - |
| BE963_RS00115 () | 17003..17455 | - | 453 | Protein_19 | DNA methylase | - |
| BE963_RS00120 () | 17532..17836 | - | 305 | Protein_20 | hypothetical protein | - |
| BE963_RS00125 () | 17840..18742 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| BE963_RS00140 () | 19609..20580 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| BE963_RS00145 () | 20580..21746 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| BE963_RS00150 () | 22334..23089 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| BE963_RS00155 () | 23863..24669 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| BE963_RS00160 () | 24670..24975 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| BE963_RS00165 () | 24977..25195 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| BE963_RS00170 () | 25903..26898 | + | 996 | WP_000246635.1 | hypothetical protein | - |
| BE963_RS00175 () | 26902..27834 | + | 933 | WP_000991831.1 | hypothetical protein | - |
| BE963_RS00180 () | 28127..28312 | + | 186 | WP_001586223.1 | hypothetical protein | - |
| BE963_RS00185 () | 28313..29215 | + | 903 | WP_024187432.1 | hypothetical protein | - |
| BE963_RS00190 () | 29217..30086 | + | 870 | WP_001586225.1 | hypothetical protein | - |
| BE963_RS00195 () | 30143..31708 | - | 1566 | WP_001586226.1 | ATP-binding protein | - |
| BE963_RS00200 () | 31995..32507 | + | 513 | WP_001586228.1 | hypothetical protein | - |
| BE963_RS00205 () | 32541..33674 | - | 1134 | WP_000545985.1 | DUF3800 domain-containing protein | - |
| BE963_RS28930 () | 33841..34613 | - | 773 | Protein_36 | hypothetical protein | - |
| BE963_RS28330 () | 34642..35061 | - | 420 | Protein_37 | hypothetical protein | - |
| BE963_RS00225 () | 35127..35882 | - | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| BE963_RS00230 () | 35879..37378 | - | 1500 | WP_000174402.1 | IS21 family transposase ISEc10 | Transposase |
| BE963_RS00235 () | 37932..40553 | + | 2622 | WP_001586230.1 | hypothetical protein | - |
| BE963_RS00240 () | 40752..40982 | + | 231 | WP_001261274.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| BE963_RS00245 () | 41071..41346 | + | 276 | WP_001403920.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BE963_RS28335 () | 41351..41568 | - | 218 | Protein_43 | transposase | - |
| BE963_RS00250 () | 41569..42099 | - | 531 | WP_000348883.1 | GNAT family N-acetyltransferase | Toxin Detail |
| BE963_RS00255 () | 42103..42372 | - | 270 | WP_001275013.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| BE963_RS00260 () | 43260..44249 | + | 990 | WP_123002471.1 | RepB family plasmid replication initiator protein | - |
| BE963_RS00265 () | 44572..45312 | - | 741 | WP_001586233.1 | tyrosine-type recombinase/integrase | - |
| BE963_RS28340 () | 45433..45615 | - | 183 | WP_042004909.1 | hypothetical protein | - |
| BE963_RS00280 () | 45958..46265 | - | 308 | Protein_49 | type II toxin-antitoxin system ParD family antitoxin | - |
| BE963_RS00290 () | 46758..47927 | + | 1170 | WP_001072355.1 | hypothetical protein | - |
| BE963_RS28345 () | 47960..48088 | + | 129 | Protein_51 | IS481 family transposase | - |
| BE963_RS00295 () | 48123..48416 | - | 294 | WP_001105060.1 | hypothetical protein | - |
| BE963_RS00300 () | 48522..48797 | - | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BE963_RS00305 () | 48797..49081 | - | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| BE963_RS00310 () | 49686..50438 | + | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| BE963_RS00315 () | 50484..51449 | - | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| BE963_RS00320 () | 51482..51862 | - | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| BE963_RS00325 () | 51887..52777 | - | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| BE963_RS00330 () | 53010..53204 | - | 195 | WP_000796505.1 | hypothetical protein | - |
| BE963_RS00335 () | 53178..53618 | + | 441 | Protein_60 | zinc-binding dehydrogenase | - |
| BE963_RS00340 () | 53749..54627 | + | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| BE963_RS00345 () | 54617..55504 | + | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| BE963_RS00350 () | 55515..56339 | + | 825 | WP_000922702.1 | phosphodiesterase | - |
| BE963_RS00355 () | 56345..57418 | + | 1074 | WP_000950177.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| BE963_RS00360 () | 57411..58721 | + | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| BE963_RS00365 () | 58780..59088 | - | 309 | Protein_66 | IS4 family transposase ISEc13 | Transposase |
| BE963_RS00370 () | 59165..59398 | - | 234 | Protein_67 | Tn3 family transposase ISPsy39 | Transposase |
| BE963_RS00375 () | 59420..60616 | - | 1197 | Protein_68 | IS3 family transposase | - |
| BE963_RS00380 () | 60641..61345 | + | 705 | Protein_69 | IS6 family transposase IS15DII | Transposase |
| BE963_RS00390 () | 61403..61933 | - | 531 | Protein_70 | histidine-type phosphatase | - |
| BE963_RS00395 () | 62055..62540 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| BE963_RS00400 () | 62565..63050 | - | 486 | WP_001267177.1 | TlpA family protein disulfide reductase | - |
| BE963_RS00405 () | 63037..63732 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| BE963_RS00410 () | 63737..64867 | - | 1131 | WP_000729220.1 | ABC transporter permease | - |
| BE963_RS00415 () | 64857..66140 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| BE963_RS00420 () | 66143..67522 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| BE963_RS00425 () | 67626..68153 | - | 528 | WP_000178050.1 | iron transporter | - |
| BE963_RS00430 () | 68194..70080 | - | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| BE963_RS00440 () | 70427..71242 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| BE963_RS00445 () | 71425..71931 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| BE963_RS00450 () | 71921..72079 | - | 159 | WP_000449408.1 | DsbA family protein | - |
| BE963_RS29315 () | 72229..72342 | - | 114 | Protein_82 | IS6 family transposase | - |
| BE963_RS00465 () | 72542..73239 | + | 698 | Protein_83 | IS1 family transposase IS1X2 | Transposase |
| BE963_RS28355 () | 73254..73388 | + | 135 | Protein_84 | IS4 family transposase | - |
| BE963_RS00475 () | 73450..74154 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| BE963_RS00480 () | 74276..75181 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| BE963_RS00485 () | 75178..76416 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| BE963_RS00490 () | 76416..77000 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| BE963_RS00500 () | 77493..78257 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| BE963_RS00515 () | 78484..78789 | - | 306 | WP_000130000.1 | hypothetical protein | Relaxase |
| BE963_RS00520 () | 78800..80005 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| BE963_RS00525 () | 80233..81237 | + | 1005 | WP_000427620.1 | IS110 family transposase IS4321 | Transposase |
| BE963_RS00530 () | 81419..81622 | - | 204 | WP_064765192.1 | hypothetical protein | - |
| BE963_RS00540 () | 81819..82658 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| BE963_RS00545 () | 82652..82999 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| BE963_RS00550 () | 83205..83993 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| BE963_RS00555 () | 84124..84597 | - | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| BE963_RS00560 () | 84755..85768 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| BE963_RS00570 () | 85839..86543 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| BE963_RS00580 () | 86604..87440 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| BE963_RS00585 () | 87440..88243 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| BE963_RS00590 () | 88304..89119 | - | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| BE963_RS00600 () | 89427..90278 | - | 852 | WP_000240536.1 | replication protein | - |
| BE963_RS00605 () | 90265..90984 | - | 720 | Protein_104 | AAA family ATPase | - |
| BE963_RS00615 () | 91034..91738 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| BE963_RS00620 () | 91802..92140 | + | 339 | Protein_106 | Tn3 family transposase TnpR_Tn3 | Transposase |
| BE963_RS00625 () | 92323..93183 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| BE963_RS00630 () | 93330..93611 | + | 282 | Protein_108 | transposase zinc-binding domain-containing protein | - |
| BE963_RS00635 () | 93781..94485 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| BE963_RS00650 () | 94830..95527 | + | 698 | Protein_110 | IS1 family transposase IS1R | Transposase |
| BE963_RS00655 () | 95543..95797 | + | 255 | Protein_111 | helix-turn-helix domain-containing protein | - |
| BE963_RS00660 () | 95813..96850 | - | 1038 | Protein_112 | IS4 family transposase IS10R | Transposase |
| BE963_RS00665 () | 96904..97608 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|