MGE detailed information
MGE type: Genomic_island MGE length: 43228 bp
Accession: NZ_CP018908 Location: 1850372..1893599 Organism: Streptococcus suis strain SS2-1 Replicon: chromosome
Accession: NZ_CP018908 Location: 1850372..1893599 Organism: Streptococcus suis strain SS2-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BVD85_RS09295 () | 1846314..1849433 | + | 3120 | WP_012775354.1 | LPXTG cell wall anchor domain-containing protein | - |
| BVD85_RS09300 () | 1849513..1850379 | + | 867 | WP_012027852.1 | Hsp33 family molecular chaperone HslO | - |
| BVD85_RS09305 () | 1850372..1851376 | + | 1005 | WP_012775355.1 | tRNA dihydrouridine synthase DusB | - |
| BVD85_RS09310 () | 1851522..1852295 | - | 774 | WP_012027854.1 | NUDIX hydrolase | - |
| BVD85_RS09315 () | 1852288..1853109 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| BVD85_RS09320 () | 1853119..1854156 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| BVD85_RS09325 () | 1854270..1856723 | - | 2454 | WP_012027858.1 | ATP-dependent Clp protease ATP-binding subunit | - |
| BVD85_RS09330 () | 1856729..1857187 | - | 459 | WP_012027859.1 | transcriptional regulator | - |
| BVD85_RS09335 () | 1857337..1857675 | + | 339 | WP_012027860.1 | thiol reductase thioredoxin | - |
| BVD85_RS09340 () | 1857675..1858376 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| BVD85_RS09345 () | 1858639..1859679 | - | 1041 | WP_012027862.1 | elongation factor Ts | - |
| BVD85_RS09350 () | 1859835..1860611 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| BVD85_RS09355 () | 1860958..1861470 | - | 513 | WP_012027864.1 | adenylate kinase | - |
| BVD85_RS09365 () | 1862124..1867202 | - | 5079 | WP_012775357.1 | S8 family serine peptidase | - |
| BVD85_RS09370 () | 1867346..1867885 | - | 540 | WP_002940254.1 | transcription termination/antitermination protein NusG | - |
| BVD85_RS09375 () | 1867995..1868171 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| BVD85_RS09380 () | 1868181..1868333 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| BVD85_RS09385 () | 1868367..1870580 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| BVD85_RS09390 () | 1870733..1871701 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| BVD85_RS09395 () | 1871703..1872569 | + | 867 | WP_012027870.1 | RluA family pseudouridine synthase | - |
| BVD85_RS09400 () | 1872596..1873408 | - | 813 | WP_002938438.1 | pur operon repressor | - |
| BVD85_RS09405 () | 1873510..1874376 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| BVD85_RS09410 () | 1874376..1875317 | - | 942 | WP_012775359.1 | 3'-5' exoribonuclease YhaM family protein | - |
| BVD85_RS09415 () | 1875307..1876545 | - | 1239 | WP_012027874.1 | DNA recombination protein RmuC | - |
| BVD85_RS09420 () | 1876546..1877178 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| BVD85_RS09425 () | 1877171..1877830 | - | 660 | WP_012027876.1 | ribulose-phosphate 3-epimerase | - |
| BVD85_RS09430 () | 1877845..1878720 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| BVD85_RS09440 () | 1879617..1881194 | - | 1578 | WP_012027878.1 | ABC transporter ATP-binding protein/permease | - |
| BVD85_RS09445 () | 1881191..1882438 | - | 1248 | WP_012027879.1 | radical SAM protein | - |
| BVD85_RS09450 () | 1882801..1883664 | - | 864 | WP_012027880.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| BVD85_RS09460 () | 1884154..1886598 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| BVD85_RS09465 () | 1886611..1888341 | - | 1731 | WP_012775361.1 | membrane protein | - |
| BVD85_RS09470 () | 1888706..1889614 | - | 909 | WP_012027884.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| BVD85_RS09475 () | 1889598..1890128 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
| BVD85_RS09480 () | 1890142..1890399 | - | 258 | WP_012775363.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| BVD85_RS09485 () | 1890401..1890661 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| BVD85_RS09490 () | 1890737..1891192 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| BVD85_RS09495 () | 1891199..1891528 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BVD85_RS09500 () | 1891518..1891805 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| BVD85_RS09505 () | 1891903..1892271 | - | 369 | WP_012775365.1 | hypothetical protein | - |
| BVD85_RS09510 () | 1892264..1892833 | - | 570 | WP_012775366.1 | ribonuclease M5 | - |
| BVD85_RS09515 () | 1892817..1893599 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| BVD85_RS09520 () | 1893706..1893843 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| BVD85_RS09525 () | 1894011..1895006 | - | 996 | WP_012775367.1 | protein jag | - |
| BVD85_RS09530 () | 1895026..1895838 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| BVD85_RS09535 () | 1895822..1896181 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| BVD85_RS09540 () | 1896252..1897646 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0 |