MGE detailed information
MGE type: Genomic_island MGE length: 43228 bp
Accession: NZ_CP016175 Location: 1847024..1890251 Organism: Streptococcus suis strain LSM102 Replicon: chromosome
Accession: NZ_CP016175 Location: 1847024..1890251 Organism: Streptococcus suis strain LSM102 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9494_RS09335 () | 1842966..1846085 | + | 3120 | WP_012775354.1 | LPXTG cell wall anchor domain-containing protein | - |
| A9494_RS09340 () | 1846165..1847031 | + | 867 | WP_012027852.1 | Hsp33 family molecular chaperone HslO | - |
| A9494_RS09345 () | 1847024..1848028 | + | 1005 | WP_012775355.1 | tRNA dihydrouridine synthase DusB | - |
| A9494_RS09350 () | 1848174..1848947 | - | 774 | WP_012027854.1 | NUDIX hydrolase | - |
| A9494_RS09355 () | 1848940..1849761 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| A9494_RS09360 () | 1849771..1850808 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| A9494_RS09365 () | 1850922..1853375 | - | 2454 | WP_012027858.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | VF |
| A9494_RS09370 () | 1853381..1853839 | - | 459 | WP_012027859.1 | transcriptional regulator | - |
| A9494_RS09375 () | 1853989..1854327 | + | 339 | WP_012027860.1 | thiol reductase thioredoxin | - |
| A9494_RS09380 () | 1854327..1855028 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| A9494_RS09385 () | 1855291..1856331 | - | 1041 | WP_012027862.1 | elongation factor Ts | - |
| A9494_RS09390 () | 1856487..1857263 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| A9494_RS09395 () | 1857610..1858122 | - | 513 | WP_012775452.1 | adenylate kinase | - |
| A9494_RS09405 () | 1858776..1863854 | - | 5079 | WP_012775357.1 | S8 family serine peptidase | - |
| A9494_RS09410 () | 1863998..1864537 | - | 540 | WP_002940254.1 | transcription termination/antitermination protein NusG | - |
| A9494_RS09415 () | 1864647..1864823 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| A9494_RS09420 () | 1864833..1864985 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| A9494_RS09425 () | 1865019..1867232 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| A9494_RS09430 () | 1867385..1868353 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| A9494_RS09435 () | 1868355..1869221 | + | 867 | WP_012027870.1 | RluA family pseudouridine synthase | - |
| A9494_RS09440 () | 1869248..1870060 | - | 813 | WP_002938438.1 | pur operon repressor | - |
| A9494_RS09445 () | 1870162..1871028 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| A9494_RS09450 () | 1871028..1871969 | - | 942 | WP_012775359.1 | 3'-5' exoribonuclease YhaM family protein | - |
| A9494_RS09455 () | 1871959..1873197 | - | 1239 | WP_012027874.1 | DNA recombination protein RmuC | - |
| A9494_RS09460 () | 1873198..1873830 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| A9494_RS09465 () | 1873823..1874482 | - | 660 | WP_012027876.1 | hypothetical protein | VF |
| A9494_RS09470 () | 1874497..1875372 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| A9494_RS09480 () | 1876269..1877846 | - | 1578 | WP_012027878.1 | ABC transporter ATP-binding protein/permease | - |
| A9494_RS09485 () | 1877843..1879090 | - | 1248 | WP_012027879.1 | radical SAM protein | - |
| A9494_RS09490 () | 1879453..1880316 | - | 864 | WP_012027880.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| A9494_RS09500 () | 1880806..1883250 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| A9494_RS09505 () | 1883263..1884993 | - | 1731 | WP_012775361.1 | membrane protein | - |
| A9494_RS09510 () | 1885358..1886266 | - | 909 | WP_012027884.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| A9494_RS09515 () | 1886250..1886780 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
| A9494_RS09520 () | 1886794..1887051 | - | 258 | WP_012775363.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| A9494_RS09525 () | 1887053..1887313 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| A9494_RS09530 () | 1887389..1887844 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| A9494_RS09535 () | 1887851..1888180 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A9494_RS09540 () | 1888170..1888457 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| A9494_RS09545 () | 1888555..1888923 | - | 369 | WP_012775453.1 | hypothetical protein | - |
| A9494_RS09550 () | 1888916..1889485 | - | 570 | WP_012775366.1 | ribonuclease M5 | - |
| A9494_RS09555 () | 1889469..1890251 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| A9494_RS09560 () | 1890358..1890495 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| A9494_RS09565 () | 1890663..1891658 | - | 996 | WP_012775367.1 | protein jag | - |
| A9494_RS09570 () | 1891678..1892490 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| A9494_RS09575 () | 1892474..1892833 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| A9494_RS09580 () | 1892904..1894298 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0 |