MGE detailed information
MGE type: Conjugative plasmid MGE length: 129035 bp
Accession: NZ_CP015914 Location: 1..129035 Organism: Escherichia coli strain 210205630 isolate 210205630 Replicon: plasmid pSLy2
Accession: NZ_CP015914 Location: 1..129035 Organism: Escherichia coli strain 210205630 isolate 210205630 Replicon: plasmid pSLy2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A9C00_RS25235 () | 447..839 | - | 393 | WP_000084745.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| A9C00_RS25245 () | 1174..1878 | - | 705 | WP_001067848.1 | IS6-like element IS26 family transposase | - |
| A9C00_RS25250 () | 1869..4901 | + | 3033 | WP_050576375.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| A9C00_RS25255 () | 4935..5435 | + | 501 | Protein_4 | Tn3 family transposase | - |
| A9C00_RS25260 () | 5469..5747 | + | 279 | Protein_5 | IS3 family transposase ISEc25 | Transposase |
| A9C00_RS25275 () | 6049..7277 | + | 1229 | WP_113706755.1 | IS3 family transposase IS2 | Transposase |
| A9C00_RS25280 () | 7352..7639 | - | 288 | WP_000222766.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| A9C00_RS25285 () | 7636..7887 | - | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| A9C00_RS25290 () | 8853..9710 | - | 858 | WP_039002220.1 | incFII family plasmid replication initiator RepA | - |
| A9C00_RS25295 () | 9703..9777 | - | 75 | WP_061357229.1 | RepA leader peptide Tap | - |
| A9C00_RS25300 () | 10009..10266 | - | 258 | WP_001541895.1 | replication regulatory protein RepA | - |
| A9C00_RS25305 () | 10534..10740 | - | 207 | WP_001351576.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 10727..10788 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 10727..10788 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 10727..10788 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| - () | 10727..10788 | + | 62 | NuclAT_1 | - | Antitoxin Detail |
| A9C00_RS25310 () | 11130..11342 | - | 213 | WP_001541896.1 | ANR family transcriptional regulator | - |
| A9C00_RS25315 () | 11477..12037 | - | 561 | WP_000139310.1 | fertility inhibition protein FinO | - |
| A9C00_RS25320 () | 12092..12835 | - | 744 | WP_065304457.1 | conjugal transfer pilus acetylase TraX | - |
| A9C00_RS25325 () | 12855..18125 | - | 5271 | WP_054377139.1 | Multifunctional conjugation protein TraI | Relaxase |
| A9C00_RS25330 () | 18125..20287 | - | 2163 | WP_065304458.1 | type IV conjugative transfer system coupling protein TraD | - |
| A9C00_RS25335 () | 20540..21271 | - | 732 | WP_000850424.1 | complement resistance protein TraT | - |
| A9C00_RS25340 () | 21303..21806 | - | 504 | WP_000605510.1 | hypothetical protein | - |
| A9C00_RS25345 () | 21821..24643 | - | 2823 | WP_001007048.1 | conjugal transfer mating pair stabilization protein TraG | - |
| A9C00_RS25350 () | 24640..26013 | - | 1374 | WP_170926237.1 | conjugal transfer protein TraH | - |
| A9C00_RS25355 () | 26013..26375 | - | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| A9C00_RS25360 () | 26305..26850 | - | 546 | WP_000052613.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| A9C00_RS25365 () | 26837..27118 | - | 282 | WP_039002206.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| A9C00_RS25370 () | 27234..27977 | - | 744 | WP_039002205.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| A9C00_RS25375 () | 27970..28230 | - | 261 | WP_000864348.1 | conjugal transfer protein TrbE | - |
| A9C00_RS25380 () | 28257..30065 | - | 1809 | WP_000821844.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| A9C00_RS25385 () | 30062..30700 | - | 639 | WP_000777691.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| A9C00_RS25390 () | 30709..31701 | - | 993 | WP_023148235.1 | conjugal transfer pilus assembly protein TraU | - |
| A9C00_RS25395 () | 31698..32330 | - | 633 | WP_001749440.1 | type-F conjugative transfer system protein TraW | - |
| A9C00_RS25400 () | 32327..32713 | - | 387 | WP_039002198.1 | type-F conjugative transfer system protein TrbI | - |
| A9C00_RS25405 () | 32710..35337 | - | 2628 | WP_001064265.1 | type IV secretion system protein TraC | - |
| A9C00_RS28955 () | 35497..35718 | - | 222 | WP_001278692.1 | conjugal transfer protein TraR | - |
| A9C00_RS25410 () | 35853..36368 | - | 516 | WP_000724019.1 | type IV conjugative transfer system lipoprotein TraV | - |
| A9C00_RS25415 () | 36365..36733 | - | 369 | WP_071787938.1 | conjugal transfer protein TrbD | - |
| A9C00_RS25420 () | 36672..37259 | - | 588 | WP_000002772.1 | conjugal transfer protein TraP | - |
| A9C00_RS25425 () | 37249..38676 | - | 1428 | WP_000146690.1 | conjugal transfer protein TraB | - |
| A9C00_RS25430 () | 38676..39380 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| A9C00_RS25435 () | 39391..39957 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| A9C00_RS25440 () | 39979..40290 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| A9C00_RS25445 () | 40295..40657 | - | 363 | WP_000994784.1 | type IV conjugative transfer system pilin TraA | - |
| A9C00_RS25450 () | 40690..41085 | - | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| A9C00_RS25455 () | 41184..41873 | - | 690 | WP_039002187.1 | conjugal transfer transcriptional regulator TraJ | - |
| A9C00_RS25460 () | 42060..42443 | - | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| A9C00_RS25465 () | 42764..43366 | + | 603 | WP_000243712.1 | hypothetical protein | VF |
| A9C00_RS25470 () | 43663..44484 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| A9C00_RS25475 () | 44606..44890 | - | 285 | WP_065304459.1 | hypothetical protein | - |
| A9C00_RS25480 () | 44894..47860 | - | 2967 | WP_000008826.1 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| A9C00_RS25485 () | 47841..48463 | - | 623 | Protein_49 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| A9C00_RS25495 () | 49606..49764 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 49808..50032 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 49808..50032 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 49808..50032 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 49808..50032 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| A9C00_RS30835 () | 49844..50032 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| A9C00_RS25505 () | 50044..50763 | - | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| A9C00_RS25510 () | 50760..51194 | - | 435 | WP_000845901.1 | conjugation system SOS inhibitor PsiB | - |
| A9C00_RS25515 () | 51249..53207 | - | 1959 | WP_065304460.1 | ParB/RepB/Spo0J family partition protein | - |
| A9C00_RS25520 () | 53272..53505 | - | 234 | WP_065304461.1 | DUF905 domain-containing protein | - |
| A9C00_RS25525 () | 53563..54102 | - | 540 | WP_065304462.1 | single-stranded DNA-binding protein | - |
| A9C00_RS31020 () | 54128..54334 | - | 207 | WP_000275853.1 | hypothetical protein | - |
| A9C00_RS25540 () | 54954..55517 | - | 564 | WP_001315564.1 | class I SAM-dependent methyltransferase | - |
| A9C00_RS25545 () | 55565..56926 | - | 1362 | WP_038999961.1 | DUF3560 domain-containing protein | - |
| A9C00_RS25550 () | 56978..57208 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| A9C00_RS25555 () | 58242..58433 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| A9C00_RS25560 () | 58430..58852 | - | 423 | WP_058647586.1 | DUF1380 family protein | - |
| A9C00_RS25565 () | 58899..59201 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| A9C00_RS30840 () | 59742..60512 | - | 771 | WP_065304463.1 | hypothetical protein | - |
| A9C00_RS25575 () | 60558..60992 | - | 435 | WP_000274502.1 | DUF1380 family protein | - |
| A9C00_RS25580 () | 61006..61227 | - | 222 | WP_001104892.1 | hypothetical protein | - |
| A9C00_RS25585 () | 61228..61911 | - | 684 | WP_001599378.1 | DNA methylase | - |
| A9C00_RS29935 () | 61988..62299 | - | 312 | WP_065304464.1 | hypothetical protein | - |
| A9C00_RS25595 () | 62296..63198 | - | 903 | WP_205247800.1 | DUF1281 domain-containing protein | - |
| A9C00_RS25600 () | 63616..63864 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| A9C00_RS25605 () | 63861..64298 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| A9C00_RS25610 () | 64298..65569 | + | 1272 | WP_000457523.1 | Y-family DNA polymerase | - |
| A9C00_RS25615 () | 65574..65966 | - | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| A9C00_RS25620 () | 65971..66942 | - | 972 | WP_001103690.1 | hypothetical protein | - |
| A9C00_RS25625 () | 67164..67808 | + | 645 | WP_000633913.1 | AAA family ATPase | - |
| A9C00_RS25630 () | 67802..68077 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| A9C00_RS25635 () | 68151..69005 | - | 855 | WP_065304466.1 | site-specific integrase | - |
| A9C00_RS25640 () | 69002..69433 | - | 432 | WP_065304471.1 | hypothetical protein | - |
| A9C00_RS25645 () | 69499..70203 | + | 705 | WP_065304467.1 | IS6-like element IS26 family transposase | - |
| A9C00_RS25650 () | 70352..71677 | - | 1326 | WP_021512928.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| A9C00_RS29945 () | 71787..72484 | + | 698 | Protein_81 | IS1 family transposase IS1R | Transposase |
| A9C00_RS25665 () | 72585..72866 | - | 282 | WP_000639434.1 | hypothetical protein | - |
| A9C00_RS25670 () | 72968..73864 | - | 897 | Protein_83 | IS3 family transposase ISEhe3 | Transposase |
| A9C00_RS25675 () | 73929..74747 | + | 819 | Protein_84 | IS30 family transposase IS30D | Transposase |
| A9C00_RS30560 () | 76055..76231 | + | 177 | Protein_86 | IS30 family transposase IS30D | Transposase |
| A9C00_RS25700 () | 76656..76940 | - | 285 | WP_000642771.1 | hypothetical protein | - |
| A9C00_RS25705 () | 76960..78093 | - | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| A9C00_RS25710 () | 78356..81474 | - | 3119 | Protein_89 | hypothetical protein | - |
| A9C00_RS25715 () | 81780..82010 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| A9C00_RS25720 () | 82007..82423 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| A9C00_RS25725 () | 82585..83562 | - | 978 | Protein_92 | AAA family ATPase | - |
| A9C00_RS25730 () | 83664..84872 | + | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| A9C00_RS25735 () | 84886..86061 | - | 1176 | Protein_94 | AAA family ATPase | - |
| A9C00_RS25740 () | 86526..87521 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| A9C00_RS25745 () | 87525..88457 | + | 933 | WP_000991832.1 | hypothetical protein | - |
| A9C00_RS25750 () | 88594..89291 | - | 698 | Protein_97 | IS1 family transposase IS1R | Transposase |
| A9C00_RS25755 () | 89505..92621 | - | 3117 | WP_039002890.1 | HsdR family type I site-specific deoxyribonuclease | - |
| A9C00_RS25760 () | 92743..94014 | - | 1272 | WP_023142242.1 | restriction endonuclease subunit S | - |
| A9C00_RS25765 () | 94011..95567 | - | 1557 | WP_001617892.1 | type I restriction-modification system subunit M | - |
| A9C00_RS25770 () | 95750..95971 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| A9C00_RS25775 () | 95971..96351 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| A9C00_RS25780 () | 96356..96535 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| A9C00_RS25785 () | 96563..96922 | + | 360 | WP_001513660.1 | hypothetical protein | - |
| A9C00_RS25790 () | 96846..97259 | + | 414 | Protein_105 | IS3 family transposase ISLad1 | Transposase |
| A9C00_RS25795 () | 97209..97526 | - | 318 | WP_001513659.1 | hypothetical protein | - |
| A9C00_RS25800 () | 97754..98734 | - | 981 | WP_001567628.1 | IS5 family transposase IS5D | Transposase |
| A9C00_RS25805 () | 98978..100381 | + | 1404 | WP_065304468.1 | S-methylmethionine permease | - |
| A9C00_RS25810 () | 100368..101300 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| A9C00_RS25815 () | 101409..101738 | - | 330 | Protein_110 | TOBE domain-containing protein | - |
| A9C00_RS25820 () | 101754..102451 | - | 698 | Protein_111 | IS1 family transposase IS1R | Transposase |
| A9C00_RS29045 () | 102509..102757 | + | 249 | Protein_112 | abortive infection family protein | - |
| A9C00_RS25825 () | 103046..103858 | - | 813 | WP_032333019.1 | hypothetical protein | - |
| A9C00_RS25840 () | 104644..105621 | + | 978 | WP_000361612.1 | RepB family plasmid replication initiator protein | - |
| A9C00_RS25845 () | 105906..106646 | - | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
| A9C00_RS25850 () | 106767..106934 | - | 168 | WP_063078056.1 | hypothetical protein | - |
| A9C00_RS25855 () | 107049..108211 | - | 1163 | Protein_117 | IS3 family transposase ISEhe3 | Transposase |
| A9C00_RS25865 () | 108407..112483 | + | 4077 | WP_065304469.1 | Serine protease SepA autotransporter | VF |
| A9C00_RS25870 () | 112661..113350 | - | 690 | Protein_119 | IS3 family transposase ISEhe3 | Transposase |
| A9C00_RS25875 () | 113385..113624 | - | 240 | Protein_120 | IS66 family transposase ISEc8 | Transposase |
| A9C00_RS25880 () | 113809..114432 | + | 624 | WP_000904945.1 | Tn3 family transposase TnpR_ISMpo10 | Transposase |
| A9C00_RS25885 () | 114413..117379 | + | 2967 | WP_000008826.1 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| A9C00_RS25890 () | 117431..118462 | + | 1032 | WP_053273077.1 | Type IV secretion system protein VirB11 | VF |
| A9C00_RS25895 () | 118425..118979 | + | 555 | WP_000616063.1 | Phospholipase D | VF |
| A9C00_RS25900 () | 118992..119474 | + | 483 | WP_033544604.1 | GNAT family N-acetyltransferase | - |
| A9C00_RS25905 () | 119643..120215 | + | 573 | WP_065304470.1 | IS6 family transposase | - |
| A9C00_RS25910 () | 120304..120783 | + | 480 | WP_000888203.1 | Rrf2 family transcriptional regulator | - |
| A9C00_RS25915 () | 120853..124005 | - | 3153 | WP_000347934.1 | Efflux pump membrane transporter BepE | VF |
| A9C00_RS25920 () | 124029..125204 | - | 1176 | WP_002914189.1 | Efflux pump periplasmic linker BepF | VF |
| A9C00_RS25925 () | 125524..126228 | + | 705 | WP_001067848.1 | IS6-like element IS26 family transposase | - |
| A9C00_RS25930 () | 126498..127055 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| A9C00_RS25935 () | 127238..128098 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|