MGE detailed information
MGE type: Conjugative plasmid MGE length: 107507 bp
Accession: NZ_CP014321 Location: 1..107507 Organism: Escherichia coli JJ1887 Replicon: plasmid pJJ1887-4
Accession: NZ_CP014321 Location: 1..107507 Organism: Escherichia coli JJ1887 Replicon: plasmid pJJ1887-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AX202_RS26320 () | 295..555 | - | 261 | WP_000083819.1 | replication regulatory protein RepA | - |
| AX202_RS26325 () | 795..1385 | - | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| AX202_RS26330 () | 1423..1632 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| AX202_RS26335 () | 1678..2139 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| AX202_RS26340 () | 2384..2596 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| AX202_RS26345 () | 2725..3285 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| AX202_RS26350 () | 3388..4248 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
| AX202_RS26355 () | 4307..5053 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| AX202_RS26360 () | 5073..9143 | - | 4071 | Protein_10 | Multifunctional conjugation protein TraI | Relaxase |
| AX202_RS26365 () | 9195..9899 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AX202_RS26370 () | 9963..10772 | - | 810 | Protein_12 | conjugal transfer protein TraH | - |
| AX202_RS26375 () | 10759..11184 | - | 426 | WP_001448114.1 | F-type conjugal transfer protein TrbF | - |
| AX202_RS26380 () | 11132..11473 | - | 342 | WP_001448115.1 | P-type conjugative transfer protein TrbJ | - |
| AX202_RS26385 () | 11403..11948 | - | 546 | WP_000059824.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| AX202_RS26390 () | 11935..12219 | - | 285 | WP_001448202.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| AX202_RS26395 () | 12346..12684 | - | 339 | WP_001287905.1 | conjugal transfer protein TrbA | - |
| AX202_RS26400 () | 12700..13443 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| AX202_RS26405 () | 13436..13693 | - | 258 | WP_000864320.1 | conjugal transfer protein TrbE | - |
| AX202_RS26410 () | 13720..15528 | - | 1809 | WP_000821863.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| AX202_RS26415 () | 15525..16163 | - | 639 | WP_001080257.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| AX202_RS26420 () | 16172..16477 | - | 306 | WP_000224411.1 | hypothetical protein | - |
| AX202_RS26425 () | 16507..17499 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| AX202_RS26430 () | 17496..18128 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| AX202_RS26435 () | 18125..18511 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| AX202_RS26440 () | 18508..21135 | - | 2628 | WP_001064239.1 | type IV secretion system protein TraC | - |
| AX202_RS28890 () | 21295..21516 | - | 222 | WP_001278978.1 | conjugal transfer protein TraR | - |
| AX202_RS26445 () | 21651..22166 | - | 516 | WP_000809893.1 | type IV conjugative transfer system lipoprotein TraV | - |
| AX202_RS26450 () | 22163..22414 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| AX202_RS26455 () | 22407..22760 | - | 354 | WP_071528018.1 | conjugal transfer protein TrbD | - |
| AX202_RS26460 () | 22714..23298 | - | 585 | WP_000002795.1 | conjugal transfer protein TraP | - |
| AX202_RS26465 () | 23288..24715 | - | 1428 | WP_000146638.1 | conjugal transfer protein TraB | - |
| AX202_RS26470 () | 24715..25419 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| AX202_RS26475 () | 25430..25996 | - | 567 | WP_000399804.1 | type IV conjugative transfer system protein TraE | - |
| AX202_RS26480 () | 26018..26329 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| AX202_RS26485 () | 26334..26696 | - | 363 | WP_001098998.1 | type IV conjugative transfer system pilin TraA | - |
| AX202_RS26490 () | 26730..26957 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| AX202_RS26495 () | 27051..27737 | - | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| AX202_RS26500 () | 27931..28314 | - | 384 | WP_001151564.1 | relaxosome protein TraM | - |
| AX202_RS26505 () | 28600..29247 | + | 648 | WP_000614282.1 | hypothetical protein | VF |
| AX202_RS26510 () | 29544..30365 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| AX202_RS26515 () | 30485..30772 | - | 288 | WP_000107537.1 | hypothetical protein | - |
| AX202_RS26520 () | 31464..32168 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AX202_RS26525 () | 32394..33209 | + | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| AX202_RS26530 () | 33556..35442 | + | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| AX202_RS26535 () | 35483..36010 | + | 528 | WP_000178050.1 | iron transporter | - |
| AX202_RS26540 () | 36114..37493 | + | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| AX202_RS26545 () | 37496..38779 | + | 1284 | WP_000964653.1 | ABC transporter permease | - |
| AX202_RS26550 () | 38769..39899 | + | 1131 | WP_000729220.1 | ABC transporter permease | - |
| AX202_RS26555 () | 39904..40599 | + | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| AX202_RS26560 () | 40586..41071 | + | 486 | WP_001267177.1 | TlpA family protein disulfide reductase | - |
| AX202_RS26565 () | 41096..41581 | + | 486 | WP_000874189.1 | hypothetical protein | - |
| AX202_RS26570 () | 41703..42233 | + | 531 | Protein_53 | histidine-type phosphatase | - |
| AX202_RS26575 () | 42291..42995 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AX202_RS28920 () | 43020..44216 | + | 1197 | Protein_55 | IS3 family transposase | - |
| AX202_RS26595 () | 44238..44471 | + | 234 | Protein_56 | Tn3 family transposase | - |
| AX202_RS26600 () | 44548..44856 | + | 309 | Protein_57 | IS4 family transposase ISEc13 | Transposase |
| AX202_RS26605 () | 44915..46225 | - | 1311 | WP_000476108.1 | ABC transporter substrate-binding protein | - |
| AX202_RS26610 () | 46218..47291 | - | 1074 | WP_000950177.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| AX202_RS26615 () | 47297..48121 | - | 825 | WP_000922702.1 | phosphodiesterase | - |
| AX202_RS26620 () | 48132..49019 | - | 888 | WP_001271561.1 | carbohydrate ABC transporter permease | - |
| AX202_RS26625 () | 49009..49887 | - | 879 | WP_000338039.1 | sugar ABC transporter permease | - |
| AX202_RS26630 () | 50018..50458 | - | 441 | Protein_63 | zinc-binding dehydrogenase | - |
| AX202_RS26635 () | 50432..50626 | + | 195 | WP_000796505.1 | hypothetical protein | - |
| AX202_RS26640 () | 50859..51749 | + | 891 | WP_001077068.1 | dihydrodipicolinate synthase family protein | - |
| AX202_RS26645 () | 51774..52154 | + | 381 | WP_000710783.1 | Rid family detoxifying hydrolase | - |
| AX202_RS26650 () | 52187..53152 | + | 966 | WP_001022265.1 | 2-keto-3-deoxygluconate transporter | - |
| AX202_RS26655 () | 53198..53950 | - | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| AX202_RS26660 () | 54555..54839 | + | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| AX202_RS26665 () | 54839..55114 | + | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AX202_RS26670 () | 55220..55513 | + | 294 | WP_001105060.1 | hypothetical protein | - |
| AX202_RS30305 () | 55548..55676 | - | 129 | Protein_72 | IS481 family transposase | - |
| AX202_RS26675 () | 55709..56878 | - | 1170 | WP_001072355.1 | hypothetical protein | - |
| AX202_RS26680 () | 57371..57678 | + | 308 | Protein_74 | type II toxin-antitoxin system ParD family antitoxin | - |
| AX202_RS26685 () | 57967..58664 | + | 698 | Protein_75 | IS1 family transposase IS1S | Transposase |
| AX202_RS26695 () | 58918..59940 | - | 1023 | WP_000361402.1 | helicase UvrD | - |
| AX202_RS26700 () | 59925..61490 | - | 1566 | WP_001128474.1 | AAA family ATPase | - |
| AX202_RS26705 () | 61565..61981 | - | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AX202_RS26710 () | 61978..62208 | - | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AX202_RS26715 () | 62589..66383 | + | 3795 | WP_001144732.1 | hypothetical protein | - |
| AX202_RS26720 () | 66428..66844 | - | 417 | WP_001034046.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AX202_RS26725 () | 66841..67071 | - | 231 | WP_001261278.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AX202_RS26730 () | 67336..67836 | + | 501 | WP_000528932.1 | hypothetical protein | - |
| AX202_RS26735 () | 67849..68622 | + | 774 | WP_000905949.1 | hypothetical protein | - |
| AX202_RS26740 () | 68833..70446 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| AX202_RS26745 () | 70477..70827 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| AX202_RS26750 () | 70824..71249 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| AX202_RS26755 () | 71311..72462 | + | 1152 | WP_031325939.1 | DUF3800 domain-containing protein | - |
| AX202_RS26760 () | 72496..73008 | - | 513 | WP_000151784.1 | hypothetical protein | - |
| AX202_RS26765 () | 73554..73772 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AX202_RS26770 () | 73774..74079 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AX202_RS26775 () | 74080..74886 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| AX202_RS26780 () | 75660..76415 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| AX202_RS26785 () | 77003..78169 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| AX202_RS26790 () | 78169..79140 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| AX202_RS26795 () | 79938..80879 | + | 942 | WP_106426161.1 | DUF1281 domain-containing protein | - |
| AX202_RS29665 () | 80912..81216 | + | 305 | Protein_97 | hypothetical protein | - |
| AX202_RS26805 () | 81293..81976 | + | 684 | WP_000086185.1 | DNA methylase | - |
| AX202_RS26810 () | 81977..82198 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| AX202_RS26815 () | 82212..82646 | + | 435 | WP_000274437.1 | DUF1380 family protein | - |
| AX202_RS30310 () | 82697..83473 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| AX202_RS26825 () | 84013..84315 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| AX202_RS26830 () | 84362..84784 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| AX202_RS26835 () | 84781..84972 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| AX202_RS26840 () | 86007..86237 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| AX202_RS26845 () | 86289..87650 | + | 1362 | WP_000170728.1 | DUF3560 domain-containing protein | - |
| AX202_RS26850 () | 87697..88260 | + | 564 | WP_012783964.1 | class I SAM-dependent methyltransferase | - |
| AX202_RS26855 () | 89124..89651 | + | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| AX202_RS26860 () | 89707..89940 | + | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| AX202_RS26865 () | 89999..91957 | + | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| AX202_RS26870 () | 92012..92446 | + | 435 | WP_000845901.1 | conjugation system SOS inhibitor PsiB | - |
| AX202_RS26875 () | 92443..93162 | + | 720 | WP_001276234.1 | plasmid SOS inhibition protein A | - |
| AX202_RS30390 () | 93174..93362 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 93174..93398 | + | 225 | NuclAT_0 | - | - |
| - () | 93174..93398 | + | 225 | NuclAT_0 | - | - |
| - () | 93174..93398 | + | 225 | NuclAT_0 | - | - |
| - () | 93174..93398 | + | 225 | NuclAT_0 | - | - |
| - () | 93331..93396 | + | 66 | - | - | Antitoxin Detail |
| AX202_RS26885 () | 93442..93600 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| AX202_RS26890 () | 93951..94655 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AX202_RS26895 () | 94708..96603 | + | 1896 | Protein_116 | Tn3 family transposase TnpA_Tn3 | Transposase |
| AX202_RS26900 () | 96702..97355 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| AX202_RS30330 () | 97448..97705 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| AX202_RS26910 () | 97638..98039 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| AX202_RS26915 () | 98176..99987 | - | 1812 | Protein_120 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| AX202_RS26920 () | 100058..100762 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AX202_RS26970 () | 100816..101256 | - | 441 | Protein_122 | CatB-related O-acetyltransferase | - |
| AX202_RS26925 () | 101394..102224 | - | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| AX202_RS26930 () | 102355..102909 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| AX202_RS26935 () | 103053..103757 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AX202_RS26940 () | 104027..104584 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| AX202_RS26945 () | 104767..105627 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|