MGE detailed information
MGE type: Prophage MGE length: 52129 bp
Accession: NZ_CP010890 Location: 2004711..2056839 Organism: Staphylococcus aureus strain SA564 Replicon: chromosome
Accession: NZ_CP010890 Location: 2004711..2056839 Organism: Staphylococcus aureus strain SA564 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RT87_RS10010 () | 2001211..2001501 | - | 291 | WP_000671712.1 | MAP domain-containing protein | - |
| RT87_RS10015 () | 2001516..2002946 | - | 1431 | WP_001557458.1 | extracellular adherence protein Eap/Map | - |
| RT87_RS10020 () | 2003332..2003582 | + | 251 | Protein_1892 | sphingomyelin phosphodiesterase | - |
| RT87_RS10025 () | 2003904..2004083 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| RT87_RS10035 () | 2004398..2004658 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| RT87_RS10040 () | 2004711..2005061 | - | 351 | WP_000702262.1 | Staphylococcal complement inhibitor | VF |
| RT87_RS10045 () | 2005744..2006193 | + | 450 | WP_000727645.1 | Chemotaxis inhibitory protein | VF |
| RT87_RS10050 () | 2006288..2006622 | - | 335 | Protein_1897 | SH3 domain-containing protein | - |
| RT87_RS10055 () | 2007269..2007760 | - | 492 | WP_000920042.1 | Staphylokinase | VF |
| RT87_RS10060 () | 2007951..2008706 | - | 756 | WP_000861026.1 | CHAP domain-containing protein | - |
| RT87_RS10065 () | 2008718..2008972 | - | 255 | WP_000611512.1 | phage holin | - |
| RT87_RS10070 () | 2009024..2009131 | + | 108 | WP_031762631.1 | hypothetical protein | - |
| - () | 2009053..2009192 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2009053..2009192 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2009053..2009192 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2009053..2009192 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| RT87_RS14615 () | 2009184..2009360 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| RT87_RS10075 () | 2009563..2010336 | - | 774 | WP_025174055.1 | Enterotoxin type E | VF |
| RT87_RS10080 () | 2010757..2011131 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| RT87_RS10085 () | 2011187..2011474 | - | 288 | WP_001262621.1 | hypothetical protein | - |
| RT87_RS10090 () | 2011520..2011672 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| RT87_RS10095 () | 2011665..2015447 | - | 3783 | WP_053819424.1 | hypothetical protein | - |
| RT87_RS10100 () | 2015463..2016947 | - | 1485 | WP_000567396.1 | phage tail family protein | - |
| RT87_RS10105 () | 2016944..2021473 | - | 4530 | WP_000504568.1 | phage tail tape measure protein | - |
| RT87_RS10110 () | 2021718..2022068 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| RT87_RS14620 () | 2022118..2022342 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| RT87_RS10115 () | 2022384..2023028 | - | 645 | WP_000268740.1 | phage tail protein | - |
| RT87_RS10120 () | 2023029..2023436 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| RT87_RS10125 () | 2023433..2023837 | - | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| RT87_RS10130 () | 2023834..2024196 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| RT87_RS10135 () | 2024180..2024464 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| RT87_RS10140 () | 2024454..2024738 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| RT87_RS10145 () | 2024758..2025903 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| RT87_RS10150 () | 2025927..2026664 | - | 738 | WP_000642728.1 | Clp protease ClpP | - |
| RT87_RS10155 () | 2026648..2027835 | - | 1188 | WP_053819425.1 | phage portal protein | - |
| RT87_RS10160 () | 2027851..2029512 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| RT87_RS10165 () | 2029509..2029853 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| RT87_RS10170 () | 2029983..2030282 | - | 300 | WP_000988332.1 | HNH endonuclease | - |
| RT87_RS10175 () | 2030514..2030930 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| RT87_RS10180 () | 2030958..2031158 | - | 201 | WP_001557462.1 | DUF1514 family protein | - |
| RT87_RS10185 () | 2031158..2031307 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| RT87_RS10190 () | 2031304..2031510 | - | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| RT87_RS10195 () | 2031507..2031752 | - | 246 | WP_001282077.1 | hypothetical protein | - |
| RT87_RS10200 () | 2031789..2032325 | - | 537 | WP_000185693.1 | dUTPase | - |
| RT87_RS10205 () | 2032322..2032567 | - | 246 | WP_001065108.1 | DUF1024 family protein | - |
| RT87_RS10210 () | 2032582..2032830 | - | 249 | WP_000178987.1 | hypothetical protein | - |
| RT87_RS10215 () | 2032827..2033084 | - | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| RT87_RS10220 () | 2033084..2033455 | - | 372 | WP_000101279.1 | hypothetical protein | - |
| RT87_RS10225 () | 2033468..2033872 | - | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| RT87_RS10230 () | 2033881..2034099 | - | 219 | WP_000338528.1 | hypothetical protein | - |
| RT87_RS10235 () | 2034106..2034999 | - | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| RT87_RS10240 () | 2035029..2035499 | - | 471 | WP_000934759.1 | single-stranded DNA-binding protein | - |
| RT87_RS10245 () | 2035500..2036117 | - | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| RT87_RS10250 () | 2036198..2037118 | - | 921 | WP_000180600.1 | recombinase RecT | - |
| RT87_RS10255 () | 2037120..2039063 | - | 1944 | WP_000700554.1 | AAA family ATPase | - |
| RT87_RS14625 () | 2039072..2039335 | - | 264 | WP_001205732.1 | hypothetical protein | - |
| RT87_RS10260 () | 2039344..2039604 | - | 261 | WP_000291510.1 | DUF1108 family protein | - |
| RT87_RS10265 () | 2039609..2039911 | - | 303 | WP_000165371.1 | DUF2482 family protein | - |
| RT87_RS10270 () | 2040006..2040167 | - | 162 | WP_000048129.1 | DUF1270 family protein | - |
| RT87_RS10275 () | 2040164..2040487 | - | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| RT87_RS10280 () | 2040542..2040922 | + | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| RT87_RS10285 () | 2040909..2041106 | - | 198 | WP_001148856.1 | hypothetical protein | - |
| RT87_RS10290 () | 2041122..2041874 | - | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| RT87_RS10295 () | 2041925..2042254 | + | 330 | WP_000128909.1 | hypothetical protein | - |
| RT87_RS10300 () | 2042243..2042458 | - | 216 | WP_001025404.1 | DUF2829 domain-containing protein | - |
| RT87_RS10305 () | 2042474..2042737 | - | 264 | WP_000854072.1 | helix-turn-helix domain-containing protein | - |
| RT87_RS10310 () | 2042734..2042908 | - | 175 | Protein_1952 | transcriptional regulator | - |
| RT87_RS10315 () | 2042871..2043584 | + | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| RT87_RS10320 () | 2043600..2044532 | + | 933 | WP_000759682.1 | ATP-dependent helicase | - |
| RT87_RS10325 () | 2044538..2044879 | + | 342 | WP_000591749.1 | hypothetical protein | - |
| RT87_RS10330 () | 2045083..2045265 | + | 183 | WP_000694772.1 | hypothetical protein | - |
| RT87_RS10335 () | 2045365..2046348 | + | 984 | WP_001558608.1 | Putative teichuronic acid biosynthesis glycosyltransferase TuaG | VF |
| RT87_RS10340 () | 2046359..2046601 | + | 243 | WP_000427213.1 | hypothetical protein | - |
| RT87_RS10345 () | 2046664..2047701 | + | 1038 | WP_000857180.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| RT87_RS10350 () | 2047752..2048582 | + | 831 | Protein_1960 | Phospholipase C | VF |
| RT87_RS10355 () | 2048820..2049836 | - | 1017 | WP_000595392.1 | putative leukocidin-like protein 1 | VF |
| RT87_RS10360 () | 2049858..2050913 | - | 1056 | WP_000791411.1 | putative leukocidin-like protein 2 | VF |
| RT87_RS10365 () | 2051349..2052572 | + | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| RT87_RS10370 () | 2053016..2054323 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| RT87_RS10375 () | 2054863..2056479 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| RT87_RS10380 () | 2056555..2056839 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| RT87_RS10385 () | 2057014..2057757 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| RT87_RS10390 () | 2057782..2059041 | - | 1260 | WP_000120297.1 | hypothetical protein | - |
| RT87_RS10395 () | 2059238..2059864 | + | 627 | WP_000522381.1 | nitroreductase family protein | - |
| RT87_RS10400 () | 2060225..2061010 | + | 786 | WP_000867951.1 | carbon-nitrogen family hydrolase | - |
| RT87_RS10405 () | 2061610..2061744 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | Prophage | TA6360, TA10116, TA20387 | NC_002745 | 2006528..2074317 | 0.007 |