MGE detailed information
MGE type: Conjugative plasmid MGE length: 122966 bp
Accession: NZ_CP010882 Location: 1..122966 Organism: Escherichia coli strain MNCRE44 Replicon: plasmid pMNCRE44_6
Accession: NZ_CP010882 Location: 1..122966 Organism: Escherichia coli strain MNCRE44 Replicon: plasmid pMNCRE44_6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SY51_RS26225 () | 1375..2391 | + | 1017 | WP_012372828.1 | IS5 family transposase IS5D | Transposase |
| SY51_RS26230 () | 2619..2936 | + | 318 | WP_001513659.1 | hypothetical protein | - |
| SY51_RS29055 () | 2886..3299 | - | 414 | Protein_3 | DDE-type integrase/transposase/recombinase | - |
| SY51_RS26240 () | 3223..3582 | - | 360 | WP_001513660.1 | hypothetical protein | - |
| SY51_RS26245 () | 3610..3789 | - | 180 | WP_001513661.1 | hypothetical protein | - |
| SY51_RS26250 () | 3794..4174 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| SY51_RS26255 () | 4174..4395 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| SY51_RS26260 () | 4652..5349 | + | 698 | Protein_8 | IS1 family transposase IS1G | Transposase |
| SY51_RS26265 () | 5486..6418 | - | 933 | WP_000991832.1 | hypothetical protein | - |
| SY51_RS26270 () | 6422..7417 | - | 996 | WP_000246636.1 | hypothetical protein | - |
| SY51_RS26275 () | 8125..8343 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| SY51_RS26280 () | 8345..8650 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| SY51_RS26285 () | 8651..9457 | + | 807 | WP_000016982.1 | site-specific integrase | - |
| SY51_RS26290 () | 10231..10986 | + | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| SY51_RS26295 () | 11574..12740 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| SY51_RS26300 () | 12740..13711 | + | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| SY51_RS26305 () | 14578..15480 | + | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| SY51_RS29845 () | 15484..15788 | + | 305 | Protein_18 | hypothetical protein | - |
| SY51_RS26315 () | 15865..16548 | + | 684 | WP_000086185.1 | DNA methylase | - |
| SY51_RS26320 () | 16549..16770 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| SY51_RS26325 () | 16784..17218 | + | 435 | WP_000274437.1 | DUF1380 family protein | - |
| SY51_RS30780 () | 17269..18045 | + | 777 | WP_001753849.1 | hypothetical protein | - |
| SY51_RS26335 () | 18585..18887 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| SY51_RS26340 () | 18934..19356 | + | 423 | WP_000271753.1 | DUF1380 family protein | - |
| SY51_RS26345 () | 19353..19544 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| SY51_RS26350 () | 20579..20809 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| SY51_RS26355 () | 20861..22222 | + | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| SY51_RS26360 () | 22270..22833 | + | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| SY51_RS29855 () | 22859..23083 | + | 225 | WP_016238251.1 | hypothetical protein | - |
| SY51_RS31135 () | 23246..23581 | + | 336 | WP_013023883.1 | hypothetical protein | - |
| SY51_RS26380 () | 23726..24265 | + | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| SY51_RS26385 () | 24328..24561 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| SY51_RS26390 () | 24627..26585 | + | 1959 | WP_000117179.1 | ParB/RepB/Spo0J family partition protein | - |
| SY51_RS26395 () | 26640..27074 | + | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| SY51_RS26400 () | 27071..27790 | + | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| - () | 27802..27988 | + | 187 | NuclAT_0 | - | - |
| - () | 27802..27988 | + | 187 | NuclAT_0 | - | - |
| - () | 27802..27988 | + | 187 | NuclAT_0 | - | - |
| - () | 27802..27988 | + | 187 | NuclAT_0 | - | - |
| SY51_RS29875 () | 28036..29405 | + | 1370 | WP_085947770.1 | IS3 family transposase IS150 | Transposase |
| - () | 29432..29472 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 29432..29472 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 29432..29472 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 29432..29472 | + | 41 | NuclAT_1 | - | Antitoxin Detail |
| SY51_RS26420 () | 29516..29674 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| SY51_RS31140 () | 30117..30452 | + | 336 | WP_013023876.1 | hypothetical protein | - |
| SY51_RS31145 () | 30365..30571 | + | 207 | WP_000275859.1 | hypothetical protein | - |
| SY51_RS26435 () | 30596..30883 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| SY51_RS26440 () | 31002..31823 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| SY51_RS26445 () | 32120..32722 | - | 603 | WP_000243712.1 | hypothetical protein | VF |
| SY51_RS26450 () | 33053..33436 | + | 384 | WP_001151566.1 | relaxosome protein TraM | - |
| SY51_RS26455 () | 33570..34247 | + | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| SY51_RS26460 () | 34335..34562 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| SY51_RS26465 () | 34596..34958 | + | 363 | WP_000338606.1 | type IV conjugative transfer system pilin TraA | - |
| SY51_RS26470 () | 34963..35274 | + | 312 | WP_000012107.1 | type IV conjugative transfer system protein TraL | - |
| SY51_RS26475 () | 35296..35862 | + | 567 | WP_000399791.1 | type IV conjugative transfer system protein TraE | - |
| SY51_RS26480 () | 35873..36577 | + | 705 | WP_148725207.1 | type-F conjugative transfer system secretin TraK | - |
| SY51_RS26485 () | 36577..38028 | + | 1452 | WP_000146687.1 | conjugal transfer protein TraB | - |
| SY51_RS26490 () | 37997..38584 | + | 588 | WP_013023871.1 | conjugal transfer protein TraP | - |
| SY51_RS26495 () | 38523..38882 | + | 360 | WP_001617876.1 | conjugal transfer protein TrbD | - |
| SY51_RS26500 () | 38882..39397 | + | 516 | WP_000809886.1 | type IV conjugative transfer system lipoprotein TraV | - |
| SY51_RS29110 () | 39532..39753 | + | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| SY51_RS26510 () | 39913..42540 | + | 2628 | WP_001064258.1 | type IV secretion system protein TraC | - |
| SY51_RS26515 () | 42537..42923 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| SY51_RS26520 () | 42920..43552 | + | 633 | WP_001203727.1 | type-F conjugative transfer system protein TraW | - |
| SY51_RS26525 () | 43549..44541 | + | 993 | WP_000830190.1 | conjugal transfer pilus assembly protein TraU | - |
| SY51_RS26530 () | 44571..44876 | + | 306 | WP_000224413.1 | hypothetical protein | - |
| SY51_RS26535 () | 44885..45523 | + | 639 | WP_001080259.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| SY51_RS26540 () | 45520..46482 | + | 963 | Protein_61 | conjugal transfer protein TraN | - |
| SY51_RS26550 () | 46538..47235 | + | 698 | Protein_62 | IS1 family transposase IS1G | Transposase |
| SY51_RS26555 () | 47283..47603 | + | 321 | WP_001348757.1 | conjugal transfer protein TrbA | - |
| SY51_RS26560 () | 47730..48014 | + | 285 | WP_001617873.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| SY51_RS26565 () | 48001..48546 | + | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| SY51_RS26570 () | 48476..48823 | + | 348 | WP_071571857.1 | P-type conjugative transfer protein TrbJ | - |
| SY51_RS26575 () | 48771..49196 | + | 426 | WP_001348758.1 | F-type conjugal transfer protein TrbF | - |
| SY51_RS26580 () | 49183..50556 | + | 1374 | WP_000944328.1 | conjugal transfer protein TraH | - |
| SY51_RS26585 () | 50553..53372 | + | 2820 | WP_001007062.1 | conjugal transfer mating pair stabilization protein TraG | - |
| SY51_RS26590 () | 53391..53888 | + | 498 | WP_000605862.1 | entry exclusion protein | - |
| SY51_RS26595 () | 53920..54651 | + | 732 | WP_000850429.1 | complement resistance protein TraT | - |
| SY51_RS26600 () | 54854..55633 | + | 780 | WP_000199914.1 | hypothetical protein | - |
| SY51_RS26605 () | 55630..57828 | + | 2199 | WP_024623315.1 | type IV conjugative transfer system coupling protein TraD | - |
| SY51_RS26610 () | 57828..63098 | + | 5271 | WP_001617867.1 | Multifunctional conjugation protein TraI | Relaxase |
| SY51_RS26615 () | 63118..63864 | + | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
| SY51_RS26620 () | 63919..64479 | + | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| SY51_RS26625 () | 64610..64822 | + | 213 | WP_013023861.1 | hypothetical protein | - |
| SY51_RS26630 () | 65381..65806 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| SY51_RS26635 () | 65803..66153 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| SY51_RS29125 () | 66184..66534 | + | 351 | Protein_80 | IS66 family transposase ISEc23 | Transposase |
| SY51_RS26645 () | 66582..67286 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| SY51_RS26650 () | 67585..68445 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| SY51_RS29130 () | 68595..68693 | - | 99 | Protein_83 | IS1 family transposase | - |
| SY51_RS26655 () | 68722..70032 | - | 1311 | WP_001262765.1 | DUF262 domain-containing protein | - |
| SY51_RS26660 () | 70317..70718 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| SY51_RS30785 () | 70651..70908 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| SY51_RS26670 () | 71001..71654 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| SY51_RS26675 () | 72596..73453 | - | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| SY51_RS26680 () | 73446..73520 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| SY51_RS31150 () | 73517..73651 | - | 135 | Protein_90 | protein CopA/IncA | - |
| SY51_RS26685 () | 73757..74011 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| SY51_RS26690 () | 74308..74442 | - | 135 | WP_023144756.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 74487..74547 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 74487..74547 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 74487..74547 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| - () | 74487..74547 | + | 61 | NuclAT_2 | - | Antitoxin Detail |
| SY51_RS30970 () | 74514..74800 | - | 287 | Protein_93 | DUF2726 domain-containing protein | - |
| SY51_RS26700 () | 74878..76158 | - | 1281 | Protein_94 | IS66 family transposase ISEc23 | Transposase |
| SY51_RS26705 () | 76217..76921 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| SY51_RS26710 () | 76972..77568 | - | 597 | Protein_96 | hypothetical protein | - |
| SY51_RS26725 () | 78324..79301 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| SY51_RS26730 () | 79586..80326 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| SY51_RS26735 () | 80447..80635 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| SY51_RS26740 () | 81002..82171 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| SY51_RS30500 () | 82397..82572 | - | 176 | Protein_101 | IS3 family transposase | - |
| SY51_RS29155 () | 83018..83290 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| SY51_RS26750 () | 83815..84251 | - | 437 | Protein_103 | IS3 family transposase IS2 | Transposase |
| SY51_RS26755 () | 84533..86503 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| SY51_RS26760 () | 86510..87301 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| SY51_RS26765 () | 87364..87972 | - | 609 | Protein_106 | IS66 family transposase ISEc22 | Transposase |
| SY51_RS26770 () | 88040..88822 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| SY51_RS26775 () | 88819..89841 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| SY51_RS26780 () | 89927..90872 | - | 946 | Protein_109 | IS66 family transposase ISEc8 | Transposase |
| SY51_RS26790 () | 90921..91268 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| SY51_RS26795 () | 91265..91669 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| SY51_RS26800 () | 91698..92081 | - | 384 | Protein_112 | IS3 family transposase IS629 | Transposase |
| SY51_RS26805 () | 92171..93679 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| SY51_RS30505 () | 94352..95091 | - | 740 | Protein_114 | IS3 family transposase IS629 | Transposase |
| SY51_RS30510 () | 95117..95422 | + | 306 | Protein_115 | IS91 family transposase ISSbo1 | Transposase |
| SY51_RS26835 () | 95945..97120 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| SY51_RS26840 () | 97189..99450 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| SY51_RS26845 () | 99619..100395 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| SY51_RS26850 () | 100403..101278 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| SY51_RS30520 () | 101610..102157 | - | 548 | Protein_120 | replication initiation protein | - |
| SY51_RS26865 () | 103729..104064 | - | 336 | WP_001080732.1 | colicin transporter | - |
| SY51_RS26870 () | 104193..104540 | + | 348 | WP_000142452.1 | hypothetical protein | - |
| SY51_RS26875 () | 104560..105069 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| SY51_RS26880 () | 105066..105326 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| SY51_RS30530 () | 105428..106167 | + | 740 | Protein_125 | IS3 family transposase IS629 | Transposase |
| SY51_RS31155 () | 106840..107154 | + | 315 | Protein_126 | IS5 family transposase ISKpn26 | Transposase |
| SY51_RS31160 () | 107155..107328 | + | 174 | Protein_127 | IS5 family transposase ISKpn26 | Transposase |
| SY51_RS30535 () | 107478..108111 | - | 634 | Protein_128 | histidine-type phosphatase | - |
| SY51_RS26910 () | 108233..108718 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| SY51_RS26915 () | 108743..109228 | - | 486 | WP_001267176.1 | TlpA family protein disulfide reductase | - |
| SY51_RS26920 () | 109215..109910 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| SY51_RS26925 () | 109915..111045 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| SY51_RS26930 () | 111035..112318 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| SY51_RS26935 () | 112321..113700 | - | 1380 | WP_000119836.1 | DUF2318 domain-containing protein | - |
| SY51_RS26940 () | 113804..114331 | - | 528 | WP_000178050.1 | iron transporter | - |
| SY51_RS26945 () | 114372..116258 | - | 1887 | WP_000118029.1 | FTR1 family iron permease | - |
| SY51_RS26950 () | 116605..117420 | - | 816 | WP_012372823.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| SY51_RS26955 () | 117603..118109 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| SY51_RS26960 () | 118099..118257 | - | 159 | WP_000449408.1 | DsbA family protein | - |
| SY51_RS31190 () | 118407..118520 | - | 114 | Protein_140 | IS6 family transposase | - |
| SY51_RS26970 () | 118720..118992 | + | 273 | Protein_141 | IS1 family transposase | - |
| SY51_RS29225 () | 119055..119757 | - | 703 | Protein_142 | IS6 family transposase IS15DII | Transposase |
| SY51_RS29235 () | 120363..120611 | - | 249 | Protein_143 | abortive infection family protein | - |
| SY51_RS26985 () | 120669..121366 | + | 698 | Protein_144 | IS1 family transposase IS1R | Transposase |
| SY51_RS26990 () | 121382..121711 | + | 330 | Protein_145 | TOBE domain-containing protein | - |
| SY51_RS26995 () | 121833..122746 | - | 914 | Protein_146 | homocysteine S-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|