MGE detailed information
MGE type: Integron MGE length: 47500 bp
Accession: NZ_CP010811 Location: 2722425..2769924 Organism: Vibrio cholerae strain 1154-74 Replicon: chromosome
Accession: NZ_CP010811 Location: 2722425..2769924 Organism: Vibrio cholerae strain 1154-74 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VAA049_RS12350 () | 2718988..2721774 | - | 2787 | WP_046122020.1 | alkaline phosphatase family protein | - |
| VAA049_RS12355 () | 2722425..2723465 | + | 1041 | WP_046121496.1 | IS481 family transposase ISVvu4 | Transposase |
| VAA049_RS12360 () | 2723717..2724256 | - | 540 | WP_001898634.1 | phosphoglycerate mutase family protein | - |
| VAA049_RS12365 () | 2724428..2724724 | - | 297 | WP_000617997.1 | Dabb family protein | - |
| VAA049_RS12370 () | 2724949..2725401 | + | 453 | WP_000024294.1 | DUF2384 domain-containing protein | - |
| VAA049_RS12375 () | 2725401..2725871 | + | 471 | WP_000784954.1 | RES family NAD+ phosphorylase | - |
| VAA049_RS12380 () | 2726003..2726521 | - | 519 | WP_000699012.1 | GNAT family N-acetyltransferase | - |
| VAA049_RS12385 () | 2726677..2726964 | - | 288 | WP_000869999.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VAA049_RS12390 () | 2726961..2727242 | - | 282 | WP_000086649.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VAA049_RS12395 () | 2727502..2727684 | - | 183 | WP_002044921.1 | DUF645 family protein | - |
| VAA049_RS12400 () | 2727978..2728370 | - | 393 | WP_144407500.1 | nuclear transport factor 2 family protein | - |
| VAA049_RS19425 () | 2728347..2728451 | - | 105 | Protein_2393 | acetyltransferase | - |
| VAA049_RS18700 () | 2728639..2728794 | - | 156 | WP_187372684.1 | DUF3709 domain-containing protein | - |
| VAA049_RS12405 () | 2729074..2730033 | + | 960 | WP_046121687.1 | IS30 family transposase ISVvu6 | Transposase |
| VAA049_RS12410 () | 2730056..2730634 | - | 579 | WP_001020574.1 | DJ-1/PfpI family protein | - |
| VAA049_RS12415 () | 2730831..2731115 | + | 285 | WP_000381184.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| VAA049_RS12420 () | 2731112..2731390 | + | 279 | WP_000578475.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| VAA049_RS12425 () | 2731538..2731987 | - | 450 | WP_046122021.1 | GyrI-like domain-containing protein | - |
| VAA049_RS12430 () | 2732123..2732611 | - | 489 | WP_000424242.1 | hypothetical protein | - |
| VAA049_RS12435 () | 2732754..2733758 | - | 1005 | WP_046122022.1 | LD-carboxypeptidase | - |
| VAA049_RS12440 () | 2733966..2734391 | - | 426 | WP_032475742.1 | hypothetical protein | - |
| VAA049_RS12445 () | 2734662..2735096 | - | 435 | WP_000256034.1 | GNAT family N-acetyltransferase | - |
| VAA049_RS12450 () | 2735253..2735666 | - | 414 | WP_000451550.1 | GNAT family N-acetyltransferase | - |
| VAA049_RS12455 () | 2735825..2736334 | - | 510 | WP_046122023.1 | ATPase AAA | - |
| VAA049_RS12460 () | 2736471..2736974 | - | 504 | WP_046122024.1 | DinB family protein | - |
| VAA049_RS12465 () | 2737241..2737885 | + | 645 | Protein_2407 | IS30 family transposase ISVvu6 | Transposase |
| VAA049_RS12470 () | 2738048..2738371 | + | 324 | Protein_2408 | IS30 family transposase ISVa6 | Transposase |
| VAA049_RS12475 () | 2738629..2739669 | - | 1041 | WP_046121496.1 | IS481 family transposase ISVvu4 | Transposase |
| VAA049_RS12480 () | 2739972..2740484 | - | 513 | WP_046122026.1 | hypothetical protein | - |
| VAA049_RS12485 () | 2740635..2741060 | - | 426 | WP_002023413.1 | hypothetical protein | - |
| VAA049_RS12490 () | 2741295..2741801 | - | 507 | WP_002053776.1 | GNAT family N-acetyltransferase | - |
| VAA049_RS12495 () | 2741939..2742538 | - | 600 | WP_046122430.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| VAA049_RS12500 () | 2742683..2743147 | - | 465 | WP_046122027.1 | ASCH domain-containing protein | - |
| VAA049_RS12505 () | 2743401..2743661 | - | 261 | WP_046122028.1 | DUF3709 domain-containing protein | - |
| VAA049_RS12510 () | 2743944..2744720 | - | 777 | WP_046122029.1 | FRG domain-containing protein | - |
| VAA049_RS19105 () | 2744942..2744980 | - | 39 | WP_110168446.1 | hypothetical protein | - |
| VAA049_RS18725 () | 2744999..2745124 | - | 126 | WP_080342539.1 | DUF645 family protein | - |
| VAA049_RS12515 () | 2745437..2745739 | - | 303 | WP_000818171.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VAA049_RS12520 () | 2745727..2745984 | - | 258 | WP_000861987.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VAA049_RS12525 () | 2746175..2746561 | - | 387 | WP_000703159.1 | VOC family protein | - |
| VAA049_RS12530 () | 2746769..2746950 | - | 182 | Protein_2422 | DUF645 family protein | - |
| VAA049_RS18740 () | 2747306..2747487 | - | 182 | Protein_2423 | DUF645 family protein | - |
| VAA049_RS18745 () | 2747659..2747781 | - | 123 | WP_080342637.1 | DUF3265 domain-containing protein | - |
| VAA049_RS12540 () | 2747778..2748275 | - | 498 | WP_046122031.1 | DUF2867 domain-containing protein | - |
| VAA049_RS12545 () | 2748513..2749472 | + | 960 | WP_046122032.1 | IS30 family transposase ISVvu6 | Transposase |
| VAA049_RS12550 () | 2749759..2750568 | - | 810 | WP_046122033.1 | DUF4393 domain-containing protein | - |
| VAA049_RS19115 () | 2750831..2750974 | - | 144 | WP_075042602.1 | DUF3265 domain-containing protein | - |
| VAA049_RS12555 () | 2750944..2751345 | - | 402 | WP_000351249.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| VAA049_RS19120 () | 2751345..2751515 | - | 171 | WP_001080654.1 | hypothetical protein | Antitoxin Detail |
| VAA049_RS12565 () | 2751754..2751936 | - | 183 | WP_046122034.1 | DUF645 family protein | - |
| VAA049_RS12570 () | 2752253..2752807 | - | 555 | WP_000139834.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | VF |
| VAA049_RS19125 () | 2753020..2753058 | - | 39 | WP_108244118.1 | hypothetical protein | - |
| VAA049_RS12575 () | 2753074..2753202 | - | 129 | WP_001886422.1 | DUF645 family protein | - |
| VAA049_RS12580 () | 2753498..2753911 | - | 414 | WP_042981753.1 | NUDIX domain-containing protein | - |
| VAA049_RS12585 () | 2754063..2754497 | - | 435 | WP_046122035.1 | GNAT family N-acetyltransferase | - |
| VAA049_RS12590 () | 2755359..2756318 | + | 960 | WP_046121687.1 | IS30 family transposase ISVvu6 | Transposase |
| VAA049_RS12595 () | 2756351..2756797 | - | 447 | WP_000006157.1 | hypothetical protein | - |
| VAA049_RS12600 () | 2756934..2757386 | - | 453 | WP_000863105.1 | GNAT family N-acetyltransferase | - |
| VAA049_RS12605 () | 2757548..2757910 | - | 363 | WP_046122431.1 | DUF4144 domain-containing protein | - |
| VAA049_RS12610 () | 2758000..2758494 | - | 495 | WP_046122036.1 | GNAT family N-acetyltransferase | - |
| VAA049_RS12615 () | 2758690..2758872 | - | 183 | WP_046122037.1 | DUF645 family protein | - |
| VAA049_RS12620 () | 2759167..2759655 | - | 489 | WP_046122038.1 | hypothetical protein | - |
| VAA049_RS12625 () | 2759799..2760599 | - | 801 | WP_002045689.1 | PhzF family phenazine biosynthesis protein | - |
| VAA049_RS12635 () | 2761147..2761779 | - | 633 | WP_032469608.1 | hypothetical protein | - |
| VAA049_RS19285 () | 2761926..2762378 | - | 453 | WP_046122039.1 | hypothetical protein | - |
| VAA049_RS12645 () | 2762534..2762929 | - | 396 | WP_162484595.1 | DUF4144 domain-containing protein | - |
| VAA049_RS12655 () | 2763495..2763890 | - | 396 | WP_000870868.1 | DUF3465 domain-containing protein | - |
| VAA049_RS12660 () | 2764147..2764992 | - | 846 | WP_200894346.1 | hypothetical protein | - |
| VAA049_RS12670 () | 2765836..2766015 | - | 180 | WP_001893662.1 | DUF645 family protein | - |
| VAA049_RS12680 () | 2766311..2766847 | - | 537 | WP_046122041.1 | GNAT family N-acetyltransferase | - |
| VAA049_RS12685 () | 2766972..2767892 | - | 921 | WP_046121544.1 | IS5 family transposase ISVpa3 | Transposase |
| VAA049_RS12690 () | 2768060..2768692 | - | 633 | WP_046122042.1 | hypothetical protein | - |
| VAA049_RS18780 () | 2768702..2768782 | - | 81 | WP_080342543.1 | acetyltransferase | - |
| VAA049_RS12695 () | 2768844..2769350 | - | 507 | WP_000403019.1 | GNAT family N-acetyltransferase | - |
| VAA049_RS12700 () | 2769499..2769924 | - | 426 | WP_052723536.1 | hypothetical protein | - |
| VAA049_RS12705 () | 2770087..2771127 | - | 1041 | WP_046122043.1 | IS481 family transposase | - |
| VAA049_RS12710 () | 2771438..2772247 | - | 810 | WP_046122044.1 | hypothetical protein | - |
| VAA049_RS12715 () | 2772450..2773025 | + | 576 | WP_046122045.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| VAA049_RS12720 () | 2773410..2774165 | - | 756 | WP_000621844.1 | vitamin B12 ABC transporter ATP-binding protein BtuD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|