MGE detailed information
MGE type: Genomic_island MGE length: 11788 bp
Accession: NZ_CP010132 Location: 218016..229803 Organism: Escherichia coli strain C10 Replicon: chromosome
Accession: NZ_CP010132 Location: 218016..229803 Organism: Escherichia coli strain C10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG32_RS01175 () | 214341..215549 | - | 1209 | WP_001297162.1 | propionate kinase | - |
| RG32_RS01180 () | 215575..216906 | - | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| RG32_RS01185 () | 216928..217917 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| RG32_RS01190 () | 218016..218954 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| RG32_RS27195 () | 219269..219487 | + | 219 | WP_001390702.1 | transcriptional activator TdcR | - |
| RG32_RS01200 () | 219743..220282 | + | 540 | WP_000675743.1 | hypothetical protein | - |
| RG32_RS01205 () | 220304..221491 | + | 1188 | WP_040090129.1 | YhaC family protein | - |
| RG32_RS01215 () | 222627..223772 | - | 1146 | WP_001299416.1 | glycerate 2-kinase | - |
| RG32_RS01220 () | 223869..224759 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| RG32_RS01225 () | 224789..225559 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| RG32_RS01230 () | 225575..226909 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| RG32_RS01235 () | 227284..228855 | + | 1572 | WP_001273766.1 | galactarate dehydratase | - |
| RG32_RS01240 () | 229004..229339 | + | 336 | WP_024251361.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| RG32_RS01245 () | 229339..229803 | + | 465 | WP_000347253.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| RG32_RS01250 () | 229858..230667 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| RG32_RS01260 () | 230916..232196 | + | 1281 | WP_000681910.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| RG32_RS01265 () | 232219..232692 | + | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| RG32_RS01270 () | 232703..233482 | + | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| RG32_RS01275 () | 233472..234350 | + | 879 | WP_001295548.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| RG32_RS01280 () | 234368..234802 | + | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20080 | HG738867 | 3504819..3516493 | 0.01 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21455 | NC_007779 | 3265982..3277656 | 0.01 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68442 | NZ_CP017979 | 3158126..3169800 | 0.01 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285025 | NZ_HG738867 | 3504819..3516493 | 0.01 |