MGE detailed information
MGE type: Prophage MGE length: 26443 bp
Accession: NZ_CP009790 Location: 1514336..1540778 Organism: Xylella fastidiosa strain U24d Replicon: chromosome
Accession: NZ_CP009790 Location: 1514336..1540778 Organism: Xylella fastidiosa strain U24d Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XFUD_RS07025 () | 1509403..1510671 | - | 1269 | WP_010894051.1 | cupin domain-containing protein | - |
| XFUD_RS07030 () | 1510842..1512209 | - | 1368 | WP_010894052.1 | adenylosuccinate lyase | - |
| XFUD_RS07035 () | 1512577..1512717 | + | 141 | WP_155114991.1 | hypothetical protein | - |
| XFUD_RS07040 () | 1512822..1514231 | + | 1410 | WP_010894053.1 | class II fumarate hydratase | - |
| XFUD_RS07045 () | 1514380..1515372 | - | 993 | Protein_1262 | hypothetical protein ; Integrase | Integrase |
| XFUD_RS07050 () | 1515372..1515620 | - | 249 | WP_010894056.1 | DUF4224 domain-containing protein | - |
| XFUD_RS07055 () | 1515639..1515878 | - | 240 | WP_010894057.1 | single-stranded DNA-binding protein | - |
| XFUD_RS07060 () | 1515857..1516255 | + | 399 | Protein_1265 | hypothetical protein | - |
| XFUD_RS07065 () | 1516252..1517139 | + | 888 | WP_042463158.1 | YdaU family protein | - |
| XFUD_RS07070 () | 1517045..1517809 | + | 765 | WP_195780003.1 | hypothetical protein | - |
| XFUD_RS07075 () | 1517806..1518219 | + | 414 | WP_195780004.1 | hypothetical protein | - |
| XFUD_RS07080 () | 1518239..1518937 | + | 699 | WP_042463164.1 | hypothetical protein | - |
| XFUD_RS07085 () | 1519125..1519391 | + | 267 | WP_010894061.1 | BrnT family toxin | - |
| XFUD_RS07090 () | 1519378..1519716 | + | 339 | WP_004085696.1 | BrnA antitoxin family protein | - |
| XFUD_RS07095 () | 1519919..1520416 | + | 498 | WP_042463169.1 | lysozyme | - |
| XFUD_RS07100 () | 1520409..1520738 | + | 330 | WP_010894063.1 | phage holin family protein | - |
| XFUD_RS07105 () | 1520728..1521189 | + | 462 | WP_010894064.1 | hypothetical protein | - |
| XFUD_RS07110 () | 1521191..1521403 | + | 213 | WP_042463172.1 | hypothetical protein | - |
| XFUD_RS07115 () | 1521494..1521892 | + | 399 | WP_010894066.1 | hypothetical protein | - |
| XFUD_RS07120 () | 1521843..1523393 | + | 1551 | Protein_1277 | phage terminase large subunit | - |
| XFUD_RS07125 () | 1523390..1524778 | + | 1389 | WP_195780005.1 | DUF1073 domain-containing protein | - |
| XFUD_RS07130 () | 1524827..1525108 | - | 282 | WP_004090283.1 | helix-turn-helix domain-containing protein | - |
| XFUD_RS07135 () | 1525105..1525443 | - | 339 | WP_010894070.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| XFUD_RS07140 () | 1525516..1526361 | + | 846 | WP_010894071.1 | phage head morphogenesis protein | - |
| XFUD_RS07145 () | 1526361..1527551 | + | 1191 | WP_042463176.1 | DUF2213 domain-containing protein | - |
| XFUD_RS07150 () | 1527579..1528061 | + | 483 | WP_010894073.1 | hypothetical protein | - |
| XFUD_RS07155 () | 1528071..1529054 | + | 984 | WP_010894074.1 | DUF2184 domain-containing protein | - |
| XFUD_RS07160 () | 1529118..1529417 | + | 300 | WP_010894075.1 | hypothetical protein | - |
| XFUD_RS07165 () | 1529420..1529794 | + | 375 | WP_010894076.1 | DUF4054 domain-containing protein | - |
| XFUD_RS07170 () | 1529791..1530264 | + | 474 | WP_010894077.1 | hypothetical protein | - |
| XFUD_RS07175 () | 1530245..1530625 | + | 381 | WP_010894078.1 | hypothetical protein | - |
| XFUD_RS07180 () | 1530549..1531082 | + | 534 | WP_195780009.1 | hypothetical protein | - |
| XFUD_RS07185 () | 1531083..1532579 | + | 1497 | WP_010894080.1 | DUF3383 domain-containing protein | - |
| XFUD_RS07190 () | 1532589..1533026 | + | 438 | WP_010894081.1 | DUF3277 family protein | - |
| XFUD_RS07195 () | 1533023..1533445 | + | 423 | WP_010894082.1 | hypothetical protein | - |
| XFUD_RS07200 () | 1533593..1535482 | + | 1890 | WP_010894084.1 | hypothetical protein | - |
| XFUD_RS07205 () | 1535809..1536057 | + | 249 | WP_042463681.1 | hypothetical protein | - |
| XFUD_RS07210 () | 1535942..1536294 | - | 353 | Protein_1295 | antitoxin | - |
| XFUD_RS07215 () | 1536433..1536861 | - | 429 | WP_010894086.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XFUD_RS07220 () | 1536862..1537116 | - | 255 | WP_042463183.1 | plasmid stabilization protein | Antitoxin Detail |
| XFUD_RS07225 () | 1537228..1537998 | + | 771 | WP_010894088.1 | hypothetical protein | - |
| XFUD_RS07230 () | 1537998..1538315 | + | 318 | WP_010894089.1 | hypothetical protein | - |
| XFUD_RS07235 () | 1538312..1539142 | + | 831 | WP_010894090.1 | hypothetical protein | - |
| XFUD_RS07240 () | 1539139..1539780 | + | 642 | WP_010894091.1 | hypothetical protein | - |
| XFUD_RS07245 () | 1539777..1540130 | + | 354 | WP_010894092.1 | hypothetical protein | - |
| XFUD_RS07250 () | 1540186..1540479 | - | 294 | WP_004085592.1 | putative addiction module antidote protein | Antitoxin Detail |
| XFUD_RS07255 () | 1540482..1540778 | - | 297 | WP_010894094.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XFUD_RS07260 () | 1540970..1541189 | + | 220 | Protein_1305 | tail fiber protein | - |
| XFUD_RS07265 () | 1541379..1541825 | - | 447 | WP_031336674.1 | hypothetical protein | - |
| XFUD_RS07270 () | 1542067..1543044 | - | 978 | WP_010894098.1 | hypothetical protein | - |
| XFUD_RS07275 () | 1543041..1543916 | - | 876 | WP_023906641.1 | ABC transporter ATP-binding protein | - |
| XFUD_RS13710 () | 1544135..1544296 | + | 162 | WP_010894100.1 | hypothetical protein | - |
| XFUD_RS07280 () | 1544755..1545246 | + | 492 | WP_171817079.1 | glutathione peroxidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xylella fastidiosa 9a5c | Prophage | TA20277, TA20278, TA20279 | NC_002488 | 1514347..1540790 | 0 |