MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 145722 bp
Accession: NZ_CP006642 Location: 1..145722 Organism: Escherichia coli PCN061 Replicon: plasmid PCN061p6
Accession: NZ_CP006642 Location: 1..145722 Organism: Escherichia coli PCN061 Replicon: plasmid PCN061p6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCN061_RS24085 () | 1..1011 | + | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
| PCN061_RS24095 () | 1817..2146 | - | 330 | Protein_1 | lipocalin family protein | - |
| PCN061_RS24100 () | 2264..2989 | + | 726 | WP_000331736.1 | IS607 family transposase ISAfe11 | Transposase |
| PCN061_RS24105 () | 3089..3499 | + | 411 | WP_000750473.1 | hydroxyisourate hydrolase | - |
| PCN061_RS24110 () | 3602..4561 | + | 960 | WP_047929041.1 | DUF523 and DUF1722 domain-containing protein | - |
| PCN061_RS24115 () | 4707..5795 | + | 1089 | WP_000633445.1 | AAA family ATPase | - |
| PCN061_RS24120 () | 5858..6562 | - | 705 | WP_001067852.1 | IS6 family transposase IS26 | Transposase |
| PCN061_RS24125 () | 6713..7528 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| PCN061_RS24130 () | 7718..8422 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PCN061_RS24135 () | 8689..10125 | + | 1437 | WP_047929042.1 | glutathione synthase | - |
| PCN061_RS24140 () | 10543..11547 | + | 1005 | WP_047929043.1 | IS110 family transposase IS4321R | Transposase |
| PCN061_RS24145 () | 11972..12676 | - | 705 | WP_032193599.1 | replication initiation protein | - |
| PCN061_RS24150 () | 12706..13410 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| PCN061_RS28710 () | 13483..13701 | + | 219 | Protein_13 | IS1 family transposase | - |
| PCN061_RS24160 () | 13695..14003 | - | 309 | WP_025670887.1 | DUF305 domain-containing protein | - |
| PCN061_RS24165 () | 14147..14578 | - | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| PCN061_RS24170 () | 14829..16304 | - | 1476 | WP_000555737.1 | copper/silver sensor histidine kinase SilS | - |
| PCN061_RS24175 () | 16297..16977 | - | 681 | WP_000697969.1 | Transcriptional regulatory protein CusR | VF |
| PCN061_RS24180 () | 17167..18552 | + | 1386 | WP_000475512.1 | Cation efflux system protein CusC | VF |
| PCN061_RS24185 () | 18580..18933 | + | 354 | WP_001246155.1 | cation efflux system protein CusF | - |
| PCN061_RS24190 () | 19047..20339 | + | 1293 | WP_001381488.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| PCN061_RS24195 () | 20350..23496 | + | 3147 | WP_020219104.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| PCN061_RS24200 () | 23583..24023 | + | 441 | WP_000758229.1 | hypothetical protein | - |
| PCN061_RS24205 () | 24121..26598 | + | 2478 | WP_001398208.1 | Ag(+)-translocating P-type ATPase SilP | - |
| PCN061_RS24210 () | 26639..26836 | + | 198 | WP_000843497.1 | DUF2933 domain-containing protein | - |
| PCN061_RS24215 () | 26870..27145 | - | 276 | Protein_25 | peptidoglycan DD-metalloendopeptidase family protein | - |
| PCN061_RS24220 () | 27180..28148 | + | 969 | WP_077783444.1 | IS5 family transposase IS903B | Transposase |
| PCN061_RS29125 () | 28185..28442 | - | 258 | WP_105278499.1 | hypothetical protein | - |
| PCN061_RS24230 () | 28588..28818 | - | 231 | Protein_28 | IS1 family transposase | - |
| PCN061_RS24235 () | 28869..29573 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PCN061_RS24240 () | 29655..29927 | - | 273 | Protein_30 | IS1 family transposase IS1X2 | Transposase |
| PCN061_RS24245 () | 30051..31454 | + | 1404 | WP_072135327.1 | DNA cytosine methyltransferase | - |
| PCN061_RS24250 () | 31488..32702 | - | 1215 | WP_001532073.1 | type II site-specific deoxyribonuclease | - |
| PCN061_RS24255 () | 32942..33487 | + | 546 | WP_047929045.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| PCN061_RS24260 () | 33534..34238 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| PCN061_RS24265 () | 34340..34819 | + | 480 | WP_000888203.1 | Rrf2 family transcriptional regulator | - |
| PCN061_RS24270 () | 34889..38041 | - | 3153 | WP_000347934.1 | Efflux pump membrane transporter BepE | VF |
| PCN061_RS24275 () | 38065..39240 | - | 1176 | WP_002914189.1 | Efflux pump periplasmic linker BepF | VF |
| PCN061_RS24280 () | 39560..40264 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| PCN061_RS27245 () | 40493..40717 | - | 225 | Protein_39 | hypothetical protein | - |
| PCN061_RS24285 () | 40856..41878 | + | 1023 | WP_000627495.1 | IS21 family transposase ISSen3 | Transposase |
| PCN061_RS24290 () | 41875..42657 | + | 783 | WP_001531258.1 | IS21 family transposase ISSen3 | Transposase |
| PCN061_RS24295 () | 42961..43248 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| PCN061_RS24300 () | 43248..43487 | - | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| PCN061_RS29530 () | 43829..43978 | + | 150 | WP_000550473.1 | hypothetical protein | - |
| PCN061_RS24310 () | 44142..47108 | - | 2967 | WP_001138064.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| PCN061_RS24315 () | 47111..47671 | - | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| PCN061_RS29135 () | 47797..48147 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| PCN061_RS24330 () | 48350..49363 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| PCN061_RS24335 () | 49521..49994 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| PCN061_RS24340 () | 50125..50628 | + | 504 | Protein_50 | nucleotidyltransferase domain-containing protein | - |
| PCN061_RS24345 () | 50680..51384 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| PCN061_RS24350 () | 51421..52548 | - | 1128 | WP_014837927.1 | DUF3883 domain-containing protein | - |
| PCN061_RS24355 () | 52599..52826 | - | 228 | WP_000248278.1 | hypothetical protein | - |
| PCN061_RS24360 () | 52850..53041 | + | 192 | WP_000951934.1 | hypothetical protein | - |
| PCN061_RS24365 () | 53523..54065 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
| PCN061_RS24370 () | 54078..54938 | - | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| PCN061_RS24375 () | 55081..55638 | + | 558 | Protein_57 | IS4 family transposase IS10R | Transposase |
| PCN061_RS24380 () | 55691..56395 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| PCN061_RS29235 () | 56407..56547 | - | 141 | WP_020219413.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| PCN061_RS24390 () | 56711..57268 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| PCN061_RS24395 () | 57451..58311 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| PCN061_RS24400 () | 58593..59561 | - | 969 | WP_077783213.1 | IS5 family transposase IS903B | Transposase |
| PCN061_RS24405 () | 59595..59792 | + | 198 | Protein_63 | hypothetical protein | VF |
| PCN061_RS24410 () | 59827..60462 | - | 636 | WP_047929047.1 | hypothetical protein | VF |
| PCN061_RS24415 () | 60476..61471 | - | 996 | WP_047929048.1 | Fimbria adhesin protein | VF |
| PCN061_RS24420 () | 61462..63948 | - | 2487 | WP_047929049.1 | Outer membrane usher protein HtrE | VF |
| PCN061_RS24425 () | 63960..64661 | - | 702 | WP_047929050.1 | putative fimbrial chaperone YadV | VF |
| PCN061_RS24430 () | 64757..65365 | - | 609 | WP_047929051.1 | hypothetical protein | VF |
| PCN061_RS24440 () | 65647..66344 | + | 698 | Protein_69 | IS1 family transposase IS1G | Transposase |
| PCN061_RS24445 () | 66611..66826 | - | 216 | WP_001180116.1 | hypothetical protein | - |
| PCN061_RS24450 () | 66816..67061 | - | 246 | WP_000356546.1 | hypothetical protein | - |
| PCN061_RS24455 () | 67106..67429 | - | 324 | WP_001181903.1 | hypothetical protein | - |
| PCN061_RS24460 () | 67575..67856 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PCN061_RS24465 () | 67846..68097 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| PCN061_RS24470 () | 69254..70090 | + | 837 | WP_001050931.1 | replication initiation protein | - |
| PCN061_RS24475 () | 70130..70576 | + | 447 | WP_001074386.1 | hypothetical protein | - |
| PCN061_RS24480 () | 70644..71066 | + | 423 | WP_031942371.1 | DNA distortion polypeptide 3 | - |
| PCN061_RS24485 () | 71126..72094 | - | 969 | WP_077249520.1 | IS5 family transposase IS903B | Transposase |
| PCN061_RS24490 () | 72096..72389 | - | 294 | WP_015060510.1 | hypothetical protein | - |
| PCN061_RS24495 () | 72405..72635 | - | 231 | WP_000051064.1 | partitioning protein | - |
| PCN061_RS24500 () | 72687..73307 | - | 621 | WP_000864791.1 | ParA family protein | - |
| PCN061_RS27285 () | 73593..73982 | + | 390 | Protein_82 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PCN061_RS24510 () | 74017..75315 | - | 1299 | Protein_83 | Tn3 family transposase TnpA_Tn3 | Transposase |
| PCN061_RS27290 () | 75383..76086 | + | 704 | Protein_84 | IS6 family transposase IS26 | Transposase |
| PCN061_RS25015 () | 76280..76666 | + | 387 | WP_063102497.1 | bleomycin binding protein | - |
| PCN061_RS24525 () | 76986..77378 | - | 393 | WP_000084745.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| PCN061_RS24535 () | 77713..78417 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| PCN061_RS24540 () | 78749..80956 | + | 2208 | WP_001162839.1 | AAA family ATPase | - |
| PCN061_RS24545 () | 80959..83541 | + | 2583 | WP_000449742.1 | hypothetical protein | - |
| PCN061_RS24550 () | 83587..83844 | - | 258 | Protein_90 | Tn3 family transposase TnpA_Tn3 | Transposase |
| PCN061_RS27305 () | 85104..85463 | + | 360 | WP_170877903.1 | hypothetical protein | - |
| PCN061_RS24565 () | 85511..86488 | - | 978 | WP_000600827.1 | IS91 family transposase ISWz1 | Transposase |
| PCN061_RS24575 () | 86680..87377 | + | 698 | Protein_94 | IS1 family transposase IS1R | Transposase |
| PCN061_RS24580 () | 87420..88214 | - | 795 | WP_047929052.1 | site-specific integrase | - |
| PCN061_RS24585 () | 88449..89431 | - | 983 | Protein_96 | hypothetical protein | - |
| PCN061_RS24590 () | 89601..89906 | - | 306 | WP_032437525.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| PCN061_RS24595 () | 89908..90126 | - | 219 | WP_032437523.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| PCN061_RS24600 () | 90726..90956 | + | 231 | WP_001261276.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| PCN061_RS24605 () | 90953..91369 | + | 417 | WP_000754566.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PCN061_RS28220 () | 91573..92429 | + | 857 | Protein_101 | IS3 family transposase ISEc15 | Transposase |
| PCN061_RS24620 () | 92711..93787 | + | 1077 | WP_000227969.1 | IS110 family transposase ISEc21 | Transposase |
| PCN061_RS24625 () | 93804..94082 | + | 279 | Protein_103 | IS3 family transposase ISEc15 | Transposase |
| PCN061_RS24630 () | 94190..96265 | - | 2076 | WP_047929053.1 | protease Lon-related BREX system protein BrxL | - |
| PCN061_RS24635 () | 96282..98999 | - | 2718 | WP_047929054.1 | BREX-1 system phosphatase PglZ type A | - |
| PCN061_RS24640 () | 98999..102646 | - | 3648 | WP_001698867.1 | BREX-1 system adenine-specific DNA-methyltransferase PglX | - |
| PCN061_RS24645 () | 102662..104425 | - | 1764 | WP_047929055.1 | DUF262 domain-containing protein | - |
| PCN061_RS24650 () | 104442..108119 | - | 3678 | WP_047929056.1 | BREX system P-loop protein BrxC | - |
| PCN061_RS24655 () | 108138..108722 | - | 585 | WP_010129448.1 | DUF1788 domain-containing protein | - |
| PCN061_RS24660 () | 108719..109318 | - | 600 | WP_006788198.1 | DUF1819 family protein | - |
| PCN061_RS24665 () | 109328..110254 | - | 927 | WP_006788197.1 | WYL domain-containing protein | - |
| PCN061_RS24670 () | 110323..110640 | - | 318 | WP_047929064.1 | hypothetical protein | - |
| PCN061_RS24675 () | 110864..111043 | + | 180 | WP_012600012.1 | hypothetical protein | - |
| PCN061_RS24680 () | 111075..112193 | - | 1119 | Protein_114 | IS3 family transposase ISRaq1 | Transposase |
| PCN061_RS24690 () | 113026..114744 | - | 1719 | WP_047929058.1 | hybrid sensor histidine kinase/response regulator | - |
| PCN061_RS24695 () | 114741..115229 | - | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| PCN061_RS24700 () | 115222..116205 | - | 984 | WP_001245143.1 | hypothetical protein | - |
| PCN061_RS24705 () | 116209..117123 | - | 915 | WP_000891983.1 | response regulator | - |
| PCN061_RS24710 () | 117437..117745 | + | 309 | WP_000062770.1 | hypothetical protein | - |
| PCN061_RS24715 () | 117738..117953 | + | 216 | WP_001112907.1 | hypothetical protein | - |
| PCN061_RS24720 () | 117956..118618 | + | 663 | WP_000958205.1 | Type IV secretion system protein virB1 | VF |
| PCN061_RS24725 () | 118629..118928 | + | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| PCN061_RS24730 () | 118938..121688 | + | 2751 | WP_032201036.1 | Type IV secretion system protein virB4 | VF |
| PCN061_RS24735 () | 121707..122423 | + | 717 | WP_000770034.1 | type IV secretion system protein | - |
| PCN061_RS24740 () | 122435..122719 | + | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| PCN061_RS24745 () | 122737..123744 | + | 1008 | WP_000014166.1 | type IV secretion system protein | - |
| PCN061_RS29535 () | 123821..123961 | + | 141 | WP_000873539.1 | hypothetical protein | - |
| PCN061_RS24755 () | 123954..124640 | + | 687 | WP_001293055.1 | type IV secretion system protein | - |
| PCN061_RS24760 () | 124633..125526 | + | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| PCN061_RS24765 () | 125523..126719 | + | 1197 | WP_000980841.1 | Type IV secretion system protein virB10 | VF |
| PCN061_RS24770 () | 126723..127772 | + | 1050 | WP_000342114.1 | Type IV secretion system protein VirB11 | VF |
| PCN061_RS24775 () | 127759..128160 | + | 402 | WP_000979494.1 | hypothetical protein | - |
| PCN061_RS24780 () | 128251..128568 | + | 318 | WP_000683352.1 | hypothetical protein | - |
| PCN061_RS24785 () | 128595..128930 | + | 336 | WP_000610141.1 | hypothetical protein | - |
| PCN061_RS24790 () | 128906..129214 | + | 309 | WP_000212005.1 | hypothetical protein | - |
| PCN061_RS24795 () | 129211..131412 | + | 2202 | WP_001241818.1 | type IA DNA topoisomerase | - |
| PCN061_RS24800 () | 131409..131801 | + | 393 | WP_001079960.1 | H-NS histone family protein | - |
| PCN061_RS24805 () | 132511..134418 | + | 1908 | WP_000575554.1 | TraM recognition domain-containing protein | - |
| PCN061_RS24810 () | 134433..135179 | + | 747 | WP_000909125.1 | hypothetical protein | - |
| PCN061_RS24815 () | 135172..135699 | + | 528 | WP_001232861.1 | Phospholipase D | VF |
| PCN061_RS24820 () | 135731..136162 | - | 432 | WP_001531161.1 | hypothetical protein | - |
| PCN061_RS29240 () | 136294..136470 | - | 177 | WP_013438824.1 | hypothetical protein | - |
| PCN061_RS24825 () | 136642..137607 | - | 966 | WP_023281075.1 | DUF1738 domain-containing protein | - |
| PCN061_RS24830 () | 138062..139282 | - | 1221 | Protein_144 | ISL3 family transposase ISKox3 | Transposase |
| PCN061_RS24835 () | 139383..139808 | + | 426 | WP_000668788.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| PCN061_RS24840 () | 139808..141079 | + | 1272 | WP_000457544.1 | Y-family DNA polymerase | - |
| PCN061_RS24845 () | 141158..141409 | + | 252 | WP_000181753.1 | hypothetical protein | - |
| PCN061_RS24850 () | 141463..141768 | + | 306 | WP_000534920.1 | hypothetical protein | - |
| PCN061_RS24855 () | 142845..143816 | - | 972 | WP_000817037.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| PCN061_RS24860 () | 143816..144982 | - | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|