MGE detailed information
MGE type: IS/Tn MGE length: 177 bp
Accession: NZ_AP023309 Location: 995888..996064 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4578 Replicon: chromosome
Accession: NZ_AP023309 Location: 995888..996064 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-4578 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5680_RS04725 (991001) | 991001..991381 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| K5680_RS04730 (991437) | 991437..994004 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| K5680_RS04735 (994163) | 994163..994684 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| K5680_RS04740 (994856) | 994856..995512 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| K5680_RS04745 (995859) | 995859..996064 | + | 206 | Protein_932 | IS5 family transposase ISEcl3 | Transposase |
| K5680_RS04750 (996137) | 996137..996664 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| K5680_RS04755 (996661) | 996661..996951 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| K5680_RS04760 (997221) | 997221..997399 | - | 179 | Protein_935 | IS3 family transposase | - |
| K5680_RS04765 (997640) | 997640..997966 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| K5680_RS04770 (998239) | 998239..998586 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| K5680_RS04775 (998571) | 998571..999020 | - | 450 | WP_000381610.1 | membrane protein | - |
| K5680_RS04780 (999451) | 999451..999894 | - | 444 | WP_000715092.1 | SPI-1 type III secretion system invasion lipoprotein InvH | - |
| K5680_RS04785 (1000351) | 1000351..1001001 | + | 651 | WP_001674874.1 | type III secretion system transcriptional activator InvF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 | IS/Tn | TA25955 | NC_016810 | 3070795..3070971 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | IS/Tn | TA26055 | NC_016856 | 3068456..3068632 | 0 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | IS/Tn | TA10052 | UFRD01000002 | 4599654..4599830 | 0 |