MGE detailed information
MGE type: Prophage MGE length: 39995 bp
Accession: NZ_AP023290 Location: 2096593..2136587 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3844 Replicon: chromosome
Accession: NZ_AP023290 Location: 2096593..2136587 Organism: Salmonella enterica subsp. enterica serovar 4[5]12:i:- strain L-3844 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K5615_RS10195 () | 2092694..2094505 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| K5615_RS10200 () | 2094543..2095184 | + | 642 | WP_000800497.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| K5615_RS10205 () | 2095284..2096462 | - | 1179 | WP_000173431.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| K5615_RS10210 () | 2096593..2096883 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| K5615_RS10215 () | 2096951..2097304 | + | 354 | WP_001042119.1 | protein YebF | - |
| K5615_RS10220 () | 2097398..2098057 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| K5615_RS10225 () | 2098270..2100321 | + | 2052 | WP_000936999.1 | oligopeptidase B | - |
| K5615_RS10230 () | 2100356..2101054 | - | 699 | WP_000944282.1 | exodeoxyribonuclease X | - |
| K5615_RS10235 () | 2101078..2101734 | - | 657 | WP_000100258.1 | carbon-nitrogen hydrolase family protein | - |
| K5615_RS10240 () | 2101842..2102072 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| K5615_RS10245 () | 2102210..2102584 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| K5615_RS10250 () | 2102585..2103460 | + | 876 | WP_000979702.1 | copper homeostasis membrane protein CopD | - |
| K5615_RS10255 () | 2103477..2103830 | + | 354 | WP_000722368.1 | YebY family protein | - |
| - | 2103930..2104075 | - | 146 | - | - | Antitoxin Detail |
| - | 2103970..2104073 | + | 104 | - | - | Toxin Detail |
| K5615_RS10260 () | 2104204..2105127 | - | 924 | Protein_2017 | hypothetical protein ; Integrase | Integrase |
| K5615_RS24265 () | 2105391..2105852 | - | 462 | Protein_2018 | DNA breaking-rejoining protein | - |
| K5615_RS10270 () | 2105841..2106032 | + | 192 | Protein_2019 | glycoside hydrolase family 19 protein | - |
| K5615_RS10275 () | 2106086..2106619 | + | 534 | WP_001050882.1 | DUF2514 domain-containing protein | - |
| K5615_RS10280 () | 2106876..2107043 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| K5615_RS10285 () | 2107108..2107296 | - | 189 | WP_001521334.1 | hypothetical protein | - |
| K5615_RS10290 () | 2107351..2107611 | + | 261 | Protein_2023 | DUF1441 family protein | - |
| K5615_RS10295 () | 2107826..2108170 | + | 345 | Protein_2024 | macro domain-containing protein | - |
| K5615_RS10300 () | 2108180..2108650 | + | 471 | Protein_2025 | tail fiber assembly protein | - |
| K5615_RS10305 () | 2108747..2108947 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| K5615_RS24270 () | 2109337..2109517 | - | 181 | Protein_2027 | IS3 family transposase | - |
| K5615_RS10310 () | 2109508..2109609 | + | 102 | Protein_2028 | arsenic transporter | - |
| K5615_RS24275 () | 2110231..2110463 | + | 233 | Protein_2029 | helix-turn-helix domain-containing protein | - |
| K5615_RS10325 () | 2110790..2111404 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| K5615_RS10330 () | 2111414..2111572 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| K5615_RS10335 () | 2111705..2112619 | - | 915 | WP_001233446.1 | DMT family transporter | - |
| K5615_RS10340 () | 2113932..2114354 | - | 423 | Protein_2033 | hypothetical protein ; Integrase | Integrase |
| K5615_RS10345 () | 2114424..2115618 | + | 1195 | Protein_2034 | IS256 family transposase IS285 | Transposase |
| K5615_RS10350 () | 2115764..2115904 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| K5615_RS10355 () | 2116070..2116339 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| K5615_RS10360 () | 2116709..2117128 | + | 420 | WP_000354408.1 | GNAT family N-acetyltransferase | - |
| K5615_RS10365 () | 2117516..2117992 | - | 477 | WP_000030934.1 | hypothetical protein | - |
| K5615_RS10370 () | 2118322..2118717 | - | 396 | WP_000422882.1 | DUF1398 domain-containing protein | - |
| K5615_RS10375 () | 2119400..2120122 | + | 723 | WP_000182072.1 | hypothetical protein | VF |
| K5615_RS10380 () | 2120407..2120571 | + | 165 | WP_001134856.1 | membrane protein | - |
| K5615_RS10385 () | 2120795..2121445 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| K5615_RS10390 () | 2121464..2121655 | - | 192 | WP_000457836.1 | YebW family protein | - |
| K5615_RS10395 () | 2121766..2122002 | - | 237 | WP_024131108.1 | YebV family protein | - |
| K5615_RS10400 () | 2122120..2123559 | - | 1440 | WP_001542138.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| K5615_RS10405 () | 2123637..2126270 | - | 2634 | WP_001535256.1 | hypothetical protein | VF |
| K5615_RS10410 () | 2126239..2127522 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| K5615_RS10415 () | 2127651..2128148 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| K5615_RS10420 () | 2128246..2128932 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| K5615_RS10425 () | 2128952..2131000 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| K5615_RS10430 () | 2131194..2132075 | + | 882 | WP_000984498.1 | protease HtpX | - |
| K5615_RS10435 () | 2132123..2133496 | - | 1374 | WP_000416128.1 | MFS transporter | - |
| K5615_RS10440 () | 2133672..2134463 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| K5615_RS10445 () | 2134675..2134914 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| K5615_RS10450 () | 2135072..2135215 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| K5615_RS10455 () | 2135286..2135573 | + | 288 | WP_001000660.1 | YebO family protein | - |
| K5615_RS10460 () | 2136222..2136365 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| K5615_RS10465 () | 2136378..2136587 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| K5615_RS10470 () | 2136807..2138552 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| K5615_RS10475 () | 2138618..2139427 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| K5615_RS10480 () | 2139424..2139990 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| K5615_RS10485 () | 2140400..2140858 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Prophage | TA20681 | NC_003197 | 1935544..1973853 | 0.001 | |
| Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S | Prophage | TA26047 | NC_016856 | 1954607..1985261 | 0.007 | |
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Prophage | TA297229 | UFRD01000002 | 813036..851340 | 0.001 |