NZ_AP0232281..170909

MGE detailed information

MGE type: Integron        MGE length: 170909 bp
Accession: NZ_AP023228        Location: 1..170909         Organism: Escherichia coli strain YJ3       Replicon: plasmid pYJ3-a


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HXS63_RS23370 () 608..1081 + 474 WP_001389366.1 trimethoprim-resistant dihydrofolate reductase DfrA17 -
HXS63_RS23375 () 1212..2000 + 789 WP_000503573.1 Streptomycin 3''-adenylyltransferase ARG
HXS63_RS23380 () 2206..2553 + 348 WP_000679427.1 Multidrug transporter EmrE ARG
HXS63_RS23385 () 2547..3386 + 840 WP_000259031.1 Dihydropteroate synthase ARG
HXS63_RS23390 () 3514..3717 + 204 WP_000376616.1 hypothetical protein -
HXS63_RS23395 () 3873..5078 + 1206 WP_000184001.1 chromate efflux transporter -
HXS63_RS23400 () 5089..5394 + 306 WP_000130000.1 hypothetical protein Relaxase
HXS63_RS23405 () 5438..5503 + 66 Protein_8 EAL domain-containing protein -
HXS63_RS23410 () 5621..6385 + 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
HXS63_RS23415 () 6878..7462 - 585 WP_001137892.1 TetR family transcriptional regulator -
HXS63_RS23420 () 7462..8700 - 1239 WP_000004159.1 MFS transporter -
HXS63_RS23425 () 8697..9611 - 915 WP_023063803.1 hypothetical protein ARG
HXS63_RS23430 () 9733..10437 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
HXS63_RS23435 () 10572..10667 + 96 WP_013362819.1 23S rRNA methyltransferase attenuation leader peptide -
HXS63_RS23440 () 10793..11530 + 738 WP_013362818.1 rRNA adenine N-6-methyltransferase ARG
HXS63_RS23445 () 11475..11645 + 171 WP_170852050.1 rRNA adenine methyltransferase -
HXS63_RS23450 () 12160..12609 + 450 WP_013362817.1 hypothetical protein -
HXS63_RS23455 () 12570..12911 + 342 WP_023909256.1 60 kDa chaperonin 2 VF
HXS63_RS23460 () 13138..14619 + 1482 WP_024210412.1 IS91 family transposase ISVsa3 Transposase
HXS63_RS23465 () 14631..15337 + 707 Protein_20 IS6 family transposase IS26 Transposase
HXS63_RS23470 () 15403..15950 + 548 Protein_21 Tn3 family transposase TnpA_Tn3 Transposase
HXS63_RS23475 () 15986..16401 - 416 Protein_22 IS1 family transposase -
HXS63_RS23480 () 16650..17051 - 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
HXS63_RS23485 () 16984..17241 - 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
HXS63_RS23490 () 17334..17987 - 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
HXS63_RS23495 () 18926..19783 - 858 WP_032152935.1 incFII family plasmid replication initiator RepA -
HXS63_RS23500 () 19776..19850 - 75 WP_001365705.1 RepA leader peptide Tap -
HXS63_RS23505 () 20085..20342 - 258 WP_000083821.1 replication regulatory protein RepA -
HXS63_RS23510 () 20747..21769 + 1023 WP_000156883.1 IS110 family transposase ISSm1 Transposase
HXS63_RS23515 () 22241..22594 + 354 WP_000005489.1 hypothetical protein -
HXS63_RS23520 () 23007..23585 - 579 WP_032152936.1 DUF2726 domain-containing protein -
HXS63_RS23525 () 23618..24315 + 698 Protein_32 IS1 family transposase IS1S Transposase
HXS63_RS23530 () 24424..24786 + 363 WP_059330006.1 IS66 family transposase ISEc23 Transposase
HXS63_RS23535 () 24783..25133 + 351 WP_000624725.1 IS66 family transposase ISEc47 Transposase
HXS63_RS23540 () 25164..25385 + 222 WP_000080227.1 IS66 family transposase ISEc43 Transposase
HXS63_RS23545 () 25337..25678 + 342 Protein_36 transposase -
HXS63_RS23550 () 25742..26221 - 480 WP_001496175.1 ArgR family transcriptional regulator -
HXS63_RS23555 () 26302..27705 - 1404 WP_000514417.1 YfcC family protein -
HXS63_RS23560 () 27753..28757 - 1005 WP_000154545.1 Ornithine carbamoyltransferase VF
HXS63_RS23565 () 28842..29753 - 912 WP_000440183.1 carbamate kinase -
HXS63_RS23570 () 29764..30984 - 1221 WP_000410951.1 arginine deiminase -
HXS63_RS23575 () 31877..32359 + 483 Protein_42 VENN motif pre-toxin domain-containing protein -
HXS63_RS23580 () 32305..32751 - 447 Protein_43 incFII family plasmid replication initiator RepA -
HXS63_RS23585 () 32744..32818 - 75 WP_032336874.1 RepA leader peptide Tap -
HXS63_RS23590 () 33054..33311 - 258 WP_000083833.1 replication regulatory protein RepA -
HXS63_RS23595 () 33595..33801 - 207 WP_015387399.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 33788..33849 + 62 NuclAT_2 - Antitoxin Detail
- () 33788..33849 + 62 NuclAT_2 - Antitoxin Detail
- () 33788..33849 + 62 NuclAT_2 - Antitoxin Detail
- () 33788..33849 + 62 NuclAT_2 - Antitoxin Detail
HXS63_RS23600 () 33988..34170 - 183 WP_000968309.1 hypothetical protein -
HXS63_RS23605 () 34271..34876 + 606 Protein_48 IS1 family transposase -
HXS63_RS23610 () 34914..36486 - 1573 Protein_49 IS66 family transposase ISCro1 Transposase
HXS63_RS23615 () 36506..36853 - 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
HXS63_RS23620 () 36853..37534 - 682 Protein_51 IS66 family transposase ISCro1 Transposase
HXS63_RS23625 () 37589..37678 + 90 Protein_52 IS1 family transposase -
HXS63_RS23630 () 37979..38191 - 213 WP_005012601.1 hypothetical protein -
HXS63_RS23635 () 38325..38885 - 561 WP_000139363.1 fertility inhibition protein FinO -
HXS63_RS23640 () 38940..39686 - 747 WP_023149624.1 conjugal transfer pilus acetylase TraX -
HXS63_RS23645 () 39706..44826 - 5121 WP_106490500.1 Multifunctional conjugation protein TraI Relaxase
HXS63_RS23650 () 44826..47015 - 2190 WP_040110343.1 type IV conjugative transfer system coupling protein TraD -
HXS63_RS23655 () 47267..47998 - 732 WP_000850424.1 complement resistance protein TraT -
HXS63_RS23660 () 48012..48521 - 510 WP_000628100.1 conjugal transfer entry exclusion protein TraS -
HXS63_RS23665 () 48518..51343 - 2826 WP_001553826.1 conjugal transfer mating pair stabilization protein TraG -
HXS63_RS23670 () 51340..52713 - 1374 WP_021518370.1 conjugal transfer protein TraH -
HXS63_RS23675 () 52700..53092 - 393 WP_000164675.1 F-type conjugal transfer protein TrbF -
HXS63_RS23680 () 53046..53420 - 375 WP_071788165.1 P-type conjugative transfer protein TrbJ -
HXS63_RS23685 () 53350..53904 - 555 WP_001553830.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
HXS63_RS23690 () 53891..54175 - 285 WP_000624105.1 type-F conjugative transfer system pilin chaperone TraQ -
HXS63_RS23695 () 54256..54591 + 336 WP_000415571.1 hypothetical protein -
HXS63_RS23700 () 54572..54913 - 342 WP_000556794.1 conjugal transfer protein TrbA -
HXS63_RS23705 () 54927..55670 - 744 WP_001030378.1 type-F conjugative transfer system pilin assembly protein TraF -
HXS63_RS23710 () 55663..55920 - 258 WP_000864312.1 conjugal transfer protein TrbE -
HXS63_RS23715 () 55947..57755 - 1809 WP_000821840.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
HXS63_RS23720 () 57752..58390 - 639 WP_021518374.1 type-F conjugative transfer system pilin assembly protein TrbC -
HXS63_RS23725 () 58399..59391 - 993 WP_000830180.1 conjugal transfer pilus assembly protein TraU -
HXS63_RS23730 () 59388..60020 - 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
HXS63_RS23735 () 60017..60403 - 387 WP_000099686.1 type-F conjugative transfer system protein TrbI -
HXS63_RS23740 () 60400..63027 - 2628 WP_001064245.1 type IV secretion system protein TraC -
HXS63_RS23745 () 63187..63408 - 222 WP_001278689.1 conjugal transfer protein TraR -
HXS63_RS23750 () 63543..64058 - 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
HXS63_RS23755 () 64055..64306 - 252 WP_001038342.1 conjugal transfer protein TrbG -
HXS63_RS23760 () 64318..64548 - 231 WP_001352845.1 conjugal transfer protein TrbD -
HXS63_RS23765 () 64502..65092 - 591 WP_000002787.1 conjugal transfer protein TraP -
HXS63_RS23770 () 65082..66510 - 1429 Protein_81 conjugal transfer protein TraB -
HXS63_RS23775 () 66510..67214 - 705 WP_072095570.1 type-F conjugative transfer system secretin TraK -
HXS63_RS23780 () 67225..67791 - 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
HXS63_RS23785 () 67813..68124 - 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
HXS63_RS23790 () 68139..68504 - 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
HXS63_RS23795 () 68537..68932 - 396 WP_001309237.1 conjugal transfer relaxosome protein TraY -
HXS63_RS23800 () 69031..69720 - 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
HXS63_RS23805 () 69907..70290 - 384 WP_001151524.1 relaxosome protein TraM -
HXS63_RS23810 () 70611..71213 + 603 WP_013362798.1 hypothetical protein VF
HXS63_RS23815 () 71510..72331 - 822 WP_001234426.1 DUF945 domain-containing protein -
HXS63_RS23820 () 72449..72736 - 288 WP_000107535.1 hypothetical protein -
HXS63_RS23825 () 73657..73815 - 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
- () 73859..73890 - 32 NuclAT_1 - Antitoxin Detail
- () 73859..73890 - 32 NuclAT_1 - Antitoxin Detail
- () 73859..73890 - 32 NuclAT_1 - Antitoxin Detail
- () 73859..73890 - 32 NuclAT_1 - Antitoxin Detail
HXS63_RS23830 () 73915..75286 - 1372 Protein_93 IS3-like element IS150 family transposase -
- () 75334..75531 - 198 NuclAT_0 - -
- () 75334..75531 - 198 NuclAT_0 - -
- () 75334..75531 - 198 NuclAT_0 - -
- () 75334..75531 - 198 NuclAT_0 - -
HXS63_RS23835 () 75343..75531 + 189 WP_001299721.1 hypothetical protein -
HXS63_RS23840 () 75543..76262 - 720 WP_001276238.1 plasmid SOS inhibition protein A -
HXS63_RS23845 () 76259..76693 - 435 WP_000845937.1 conjugation system SOS inhibitor PsiB -
HXS63_RS23850 () 76748..76945 - 198 Protein_97 hypothetical protein -
HXS63_RS23855 () 76973..77206 - 234 WP_000005990.1 DUF905 family protein -
HXS63_RS23860 () 77274..77771 - 498 WP_042039995.1 single-stranded DNA-binding protein -
HXS63_RS23865 () 77921..79822 - 1902 WP_000936285.1 group II intron reverse transcriptase/maturase -
HXS63_RS23870 () 80500..80706 - 207 WP_000275856.1 hypothetical protein -
HXS63_RS23875 () 81116..81322 - 207 WP_001774176.1 hypothetical protein -
HXS63_RS23880 () 81348..81913 - 566 Protein_103 class I SAM-dependent methyltransferase -
HXS63_RS23885 () 81961..83322 - 1362 WP_000199439.1 DUF3560 domain-containing protein -
HXS63_RS23890 () 83374..83604 - 231 WP_000218642.1 hypothetical protein -
HXS63_RS23895 () 84116..84364 + 249 WP_071781657.1 hypothetical protein -
HXS63_RS23900 () 84636..84827 - 192 WP_001027495.1 hypothetical protein -
HXS63_RS23905 () 84824..85246 - 423 WP_000271685.1 DUF1380 family protein -
HXS63_RS23910 () 85293..85595 - 303 WP_001666994.1 antirestriction protein -
HXS63_RS23915 () 86132..86902 - 771 WP_001006251.1 hypothetical protein -
HXS63_RS23920 () 86947..87381 - 435 WP_001546462.1 DUF1380 family protein -
HXS63_RS23925 () 87395..87616 - 222 WP_001104873.1 hypothetical protein -
HXS63_RS23930 () 87617..88300 - 684 WP_032181561.1 DNA methylase -
HXS63_RS23935 () 88377..88681 - 305 Protein_114 hypothetical protein -
HXS63_RS23940 () 88685..89587 - 903 WP_064766247.1 DUF1281 domain-containing protein -
HXS63_RS23945 () 90325..91296 - 972 WP_000817031.1 ParB/RepB/Spo0J family plasmid partition protein -
HXS63_RS23950 () 91296..92462 - 1167 WP_000772446.1 Sporulation initiation inhibitor protein Soj VF
HXS63_RS23955 () 93050..93805 - 756 WP_000852146.1 replication initiation protein RepE -
HXS63_RS23960 () 94527..95333 - 807 WP_000016970.1 site-specific integrase -
HXS63_RS23965 () 95334..95639 - 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
HXS63_RS23970 () 95641..95859 - 219 WP_000813630.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
HXS63_RS23975 () 96419..96649 + 231 WP_001261286.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
HXS63_RS23980 () 96646..97062 + 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
HXS63_RS23985 () 97137..98702 + 1566 WP_001128474.1 AAA family ATPase -
HXS63_RS23990 () 98687..99577 + 891 Protein_125 DNA helicase UvrD -
HXS63_RS23995 () 99656..100455 - 800 Protein_126 IS21 family transposase IS21 Transposase
HXS63_RS24000 () 100455..101629 - 1175 Protein_127 IS21 family transposase IS21 Transposase
HXS63_RS24005 () 101717..101848 + 132 Protein_128 DNA helicase UvrD -
HXS63_RS24010 () 102102..102789 - 688 Protein_129 IS1 family transposase IS1S Transposase
HXS63_RS24015 () 103315..105516 - 2202 WP_000973519.1 Ferric aerobactin receptor VF
HXS63_RS24020 () 105598..106875 - 1278 WP_000750130.1 L-lysine N6-monooxygenase VF
HXS63_RS24025 () 106872..108614 - 1743 WP_001015721.1 Aerobactin synthase VF
HXS63_RS24030 () 108614..109561 - 948 WP_000011908.1 N(6)-hydroxylysine O-acetyltransferase VF
HXS63_RS24035 () 109562..111286 - 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
HXS63_RS24040 () 111422..112615 + 1194 WP_000095526.1 MFS transporter -
HXS63_RS24045 () 112995..113375 - 381 WP_001318207.1 fluoride efflux transporter CrcB -
HXS63_RS24050 () 113716..114129 - 414 Protein_137 phosphopyruvate hydratase -
HXS63_RS24055 () 114618..115475 - 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
HXS63_RS24060 () 115472..116329 - 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
HXS63_RS24065 () 116326..117153 - 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
HXS63_RS24070 () 117153..118067 - 915 WP_000949005.1 Putative metal ABC transporter substrate-binding protein Hpf VF
HXS63_RS24075 () 118423..119109 + 687 Protein_142 IS1 family transposase IS1S Transposase
HXS63_RS24080 () 119289..119802 - 514 Protein_143 DUF4113 domain-containing protein -
HXS63_RS24085 () 119863..119967 - 105 Protein_144 AAA family ATPase -
HXS63_RS24090 () 119969..120292 - 324 Protein_145 IS21 family transposase IS21 Transposase
HXS63_RS24095 () 121038..122015 + 978 WP_000361611.1 RepB family plasmid replication initiator protein -
HXS63_RS24100 () 122300..123040 - 741 WP_001066953.1 tyrosine-type recombinase/integrase -
HXS63_RS24105 () 123161..123349 - 189 WP_001309252.1 hypothetical protein -
HXS63_RS24110 () 123716..124876 + 1161 WP_176489665.1 hypothetical protein -
HXS63_RS24115 () 125102..125277 - 176 Protein_150 IS3 family transposase -
HXS63_RS24120 () 125723..125995 - 273 WP_001322642.1 adhesin biosynthesis transcription regulatory family protein -
HXS63_RS24125 () 126520..126956 - 437 Protein_152 IS3 family transposase IS2 Transposase
HXS63_RS24130 () 127238..129208 + 1971 WP_001496335.1 Hemin receptor VF
HXS63_RS24135 () 129215..130006 + 792 WP_000977394.1 DUF4198 domain-containing protein -
HXS63_RS24140 () 130069..130677 - 609 Protein_155 IS66 family transposase ISEc22 Transposase
HXS63_RS24145 () 130745..131527 - 783 Protein_156 IS21 family transposase IS100kyp Transposase
HXS63_RS24150 () 131524..132547 - 1024 Protein_157 IS21 family transposase IS100kyp Transposase
HXS63_RS24155 () 132633..133578 - 946 Protein_158 IS66 family transposase ISEc8 Transposase
HXS63_RS24160 () 133627..134001 - 375 WP_024193849.1 IS66 family transposase ISKpn24 Transposase
HXS63_RS24165 () 134026..134730 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
HXS63_RS24170 () 134784..135224 - 441 Protein_161 CatB-related O-acetyltransferase -
HXS63_RS24175 () 135362..136192 - 831 WP_001334766.1 Beta-lactamase OXA-1 ARG
HXS63_RS24180 () 136323..136877 - 555 WP_063840321.1 Aminoglycoside N(6')-acetyltransferase type 1 ARG
HXS63_RS24185 () 137021..137725 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
HXS63_RS24190 () 137790..140033 - 2244 Protein_165 Tn3 family transposase TnpA_Tn3 Transposase
HXS63_RS24195 () 140047..140379 + 333 WP_001393253.1 WbuC family cupin fold metalloprotein -
HXS63_RS24200 () 140426..141302 - 877 Protein_167 Beta-lactamase CTX-M-1 ARG
HXS63_RS24205 () 141558..142820 - 1263 WP_000608644.1 IS1380 family transposase ISEcp1 Transposase
HXS63_RS24210 () 143002..143187 - 186 WP_153593977.1 DUF4158 domain-containing protein -
HXS63_RS24215 () 143227..143932 - 706 Protein_170 IS6-like element IS26 family transposase -
HXS63_RS24220 () 143990..146404 + 2415 Protein_171 Tn3 family transposase TnpA_ISSba14 Transposase
HXS63_RS24225 () 146438..146542 + 105 Protein_172 IS5/IS1182 family transposase -
HXS63_RS24230 () 146692..147324 - 633 Protein_173 histidine-type phosphatase -
HXS63_RS24235 () 147446..147931 - 486 WP_000874189.1 hypothetical protein -
HXS63_RS24240 () 147956..148441 - 486 WP_001267176.1 TlpA family protein disulfide reductase -
HXS63_RS24245 () 148428..149123 - 696 WP_000117262.1 Lipoprotein-releasing system ATP-binding protein LolD VF
HXS63_RS24250 () 149128..150258 - 1131 WP_000729219.1 ABC transporter permease -
HXS63_RS24255 () 150248..151531 - 1284 WP_000964653.1 ABC transporter permease -
HXS63_RS24260 () 151534..152913 - 1380 WP_000119836.1 DUF2318 domain-containing protein -
HXS63_RS24265 () 153017..153544 - 528 WP_000178050.1 iron transporter -
HXS63_RS24270 () 153585..155471 - 1887 WP_000118029.1 FTR1 family iron permease -
HXS63_RS24275 () 155818..156633 - 816 WP_012372823.1 Na(+)-translocating NADH-quinone reductase subunit C -
HXS63_RS24280 () 156816..157322 - 507 WP_000949452.1 protein disulfide oxidoreductase -
HXS63_RS24285 () 157312..157470 - 159 WP_000449408.1 DsbA family protein -
HXS63_RS24290 () 157933..158630 + 698 Protein_185 IS1 family transposase IS1R Transposase
HXS63_RS24295 () 158624..159013 - 390 WP_112917966.1 Transposon Tn10 TetD protein VF
HXS63_RS24300 () 159101..159694 + 594 WP_000428546.1 tetracyline resistance-associated transcriptional repressor TetC -
HXS63_RS24305 () 159807..161012 - 1206 WP_001089068.1 Tetracycline resistance protein, class B ARG
HXS63_RS24310 () 161094..161717 + 624 WP_000088605.1 Tetracycline repressor protein class B from transposon Tn10 VF
HXS63_RS24315 () 161695..162381 - 687 WP_001284954.1 winged helix-turn-helix domain-containing protein -
HXS63_RS24320 () 162389..162775 - 387 WP_000460651.1 hypothetical protein -
HXS63_RS24325 () 162768..163031 - 264 WP_049802299.1 antibiotic biosynthesis monooxygenase -
HXS63_RS24330 () 163028..163725 - 698 Protein_193 IS1 family transposase IS1R Transposase
HXS63_RS24335 () 164004..164663 + 660 WP_000412211.1 Chloramphenicol acetyltransferase ARG
HXS63_RS24340 () 164864..165241 - 378 WP_000656305.1 GNAT family N-acetyltransferase -
HXS63_RS24345 () 165308..168274 - 2967 WP_001138064.1 Tn3 family transposase TnpA_TnAs3 Transposase
HXS63_RS24350 () 168277..168837 - 561 WP_021532377.1 Tn3 family transposase TnpR_TnAs3 Transposase
HXS63_RS24355 () 168888..169594 + 707 Protein_198 IS6 family transposase IS15DI Transposase
HXS63_RS24360 () 169793..170143 - 351 WP_162861269.1 DUF3330 domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance