MGE detailed information
MGE type: Prophage MGE length: 34027 bp
Accession: NC_019902 Location: 592815..626841 Organism: Thioalkalivibrio nitratireducens DSM 14787 Replicon: chromosome
Accession: NC_019902 Location: 592815..626841 Organism: Thioalkalivibrio nitratireducens DSM 14787 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TVNIR_RS20115 () | 587968..588723 | + | 756 | Protein_571 | glutamate synthase subunit alpha | - |
| TVNIR_RS20120 () | 588680..591148 | + | 2469 | WP_015257467.1 | Glutamate synthase [NADPH] large chain | - |
| TVNIR_RS02850 () | 591160..592647 | + | 1488 | WP_015257468.1 | glutamate synthase subunit beta | - |
| TVNIR_RS19535 () | 592776..592982 | + | 207 | Protein_574 | GDP-L-fucose synthase | VF |
| TVNIR_RS02860 () | 593936..594817 | + | 882 | Protein_575 | beta-CASP domain protein | - |
| TVNIR_RS02865 () | 594935..595201 | + | 267 | Protein_576 | BrnT family toxin | - |
| TVNIR_RS02870 () | 595546..595917 | + | 372 | WP_015257471.1 | hypothetical protein | - |
| TVNIR_RS02875 () | 596240..596464 | + | 225 | WP_015257472.1 | TraY domain-containing protein | Antitoxin Detail |
| TVNIR_RS02880 () | 596448..596750 | + | 303 | WP_015257473.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| TVNIR_RS02885 () | 597099..597326 | + | 228 | WP_015257474.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| TVNIR_RS02890 () | 597316..597756 | + | 441 | WP_015257475.1 | type II toxin-antitoxin system VapC family toxin | - |
| TVNIR_RS02895 () | 597894..598154 | + | 261 | WP_157092171.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| TVNIR_RS18550 () | 598141..598425 | + | 285 | Protein_583 | type II toxin-antitoxin system YafQ family toxin | - |
| TVNIR_RS02900 () | 598431..599213 | + | 783 | WP_211263169.1 | UDP-N-acetylglucosamine 2-epimerase | VF |
| TVNIR_RS02905 () | 599262..599564 | + | 303 | WP_015257479.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| TVNIR_RS02910 () | 599855..600067 | + | 213 | WP_043739165.1 | type II toxin-antitoxin system HicA family toxin | - |
| TVNIR_RS02915 () | 600077..600508 | + | 432 | WP_015257481.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| TVNIR_RS02920 () | 600815..601066 | + | 252 | WP_015257482.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| TVNIR_RS02925 () | 601070..601504 | + | 435 | WP_015257483.1 | type II toxin-antitoxin system VapC family toxin | - |
| TVNIR_RS02930 () | 601625..601870 | + | 246 | WP_015257484.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| TVNIR_RS02935 () | 601867..602154 | + | 288 | WP_043739169.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| TVNIR_RS18555 () | 602183..602293 | + | 111 | Protein_592 | transposase | - |
| TVNIR_RS02940 () | 602413..602637 | + | 225 | WP_015257486.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| TVNIR_RS02945 () | 602864..603817 | + | 954 | WP_015257487.1 | GDP-L-fucose synthase | VF |
| TVNIR_RS02950 () | 603974..604294 | + | 321 | WP_015257488.1 | helix-turn-helix domain-containing protein | - |
| TVNIR_RS02955 () | 604337..604513 | + | 177 | Protein_596 | transcriptional regulator | - |
| TVNIR_RS02960 () | 604654..604956 | + | 303 | WP_015257490.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| TVNIR_RS18560 () | 604962..605174 | + | 213 | Protein_598 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| TVNIR_RS02965 () | 605242..605469 | + | 228 | WP_015257491.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| TVNIR_RS02970 () | 605459..605899 | + | 441 | WP_015257492.1 | type II toxin-antitoxin system VapC family toxin | - |
| TVNIR_RS19540 () | 606266..606382 | + | 117 | WP_211263170.1 | winged helix-turn-helix transcriptional regulator | - |
| TVNIR_RS02980 () | 606478..606606 | + | 129 | Protein_602 | GDP-L-fucose synthase | VF |
| TVNIR_RS19545 () | 606728..607345 | + | 618 | WP_052316597.1 | DUF433 domain-containing protein | - |
| TVNIR_RS02990 () | 607329..607706 | + | 378 | WP_043739172.1 | DUF5615 family PIN-like protein | - |
| TVNIR_RS02995 () | 608061..608285 | + | 225 | WP_015257497.1 | TraY domain-containing protein | Antitoxin Detail |
| TVNIR_RS03000 () | 608269..608571 | + | 303 | WP_015257498.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| TVNIR_RS03005 () | 608724..608993 | + | 270 | WP_015257499.1 | BrnT family toxin | - |
| TVNIR_RS03010 () | 609007..609276 | + | 270 | WP_015257500.1 | BrnA antitoxin family protein | - |
| TVNIR_RS19970 () | 609454..609627 | + | 174 | WP_015257501.1 | hypothetical protein | - |
| TVNIR_RS03015 () | 609617..609829 | + | 213 | WP_043739178.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| TVNIR_RS03020 () | 609993..610313 | + | 321 | WP_015257503.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| TVNIR_RS03025 () | 610310..610633 | + | 324 | WP_015257504.1 | addiction module antidote protein | - |
| TVNIR_RS03030 () | 610785..610997 | + | 213 | WP_015257505.1 | type II toxin-antitoxin system HicA family toxin | - |
| TVNIR_RS03035 () | 611007..611438 | + | 432 | WP_015257506.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| TVNIR_RS03040 () | 611577..611828 | + | 252 | WP_015257507.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| TVNIR_RS03045 () | 611937..612158 | + | 222 | WP_052316598.1 | hypothetical protein | - |
| TVNIR_RS18575 () | 612271..612570 | + | 300 | WP_083499327.1 | nucleotidyltransferase domain-containing protein | - |
| TVNIR_RS03055 () | 612567..613058 | + | 492 | WP_043739181.1 | hypothetical protein | - |
| TVNIR_RS03060 () | 613277..613714 | + | 438 | WP_211263171.1 | MarR family EPS-associated transcriptional regulator | - |
| TVNIR_RS03065 () | 613905..614207 | + | 303 | WP_015257511.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| TVNIR_RS03070 () | 614204..614488 | + | 285 | WP_043739183.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| TVNIR_RS03075 () | 614485..614809 | + | 325 | Protein_622 | transcriptional regulator | - |
| TVNIR_RS03080 () | 614913..615137 | + | 225 | WP_006748723.1 | TraY domain-containing protein | Antitoxin Detail |
| TVNIR_RS03085 () | 615121..615423 | + | 303 | WP_043739186.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| TVNIR_RS03090 () | 615576..615845 | + | 270 | WP_015257514.1 | BrnT family toxin | Toxin Detail |
| TVNIR_RS18580 () | 615859..616128 | + | 270 | WP_015257515.1 | BrnA antitoxin family protein | Antitoxin Detail |
| TVNIR_RS03095 () | 616436..617005 | - | 570 | WP_211263140.1 | hypothetical protein | - |
| TVNIR_RS03100 () | 617089..617343 | + | 255 | WP_015257517.1 | HicA family toxin-antitoxin system toxin component | - |
| TVNIR_RS03105 () | 617333..617668 | + | 336 | WP_015257518.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| TVNIR_RS03110 () | 617900..618337 | + | 438 | WP_211263172.1 | MarR family EPS-associated transcriptional regulator | - |
| TVNIR_RS03115 () | 618491..619801 | + | 1311 | WP_015257520.1 | UDP-N-acetyl-D-glucosamine 6-dehydrogenase | VF |
| TVNIR_RS03120 () | 619981..620250 | + | 270 | WP_006749145.1 | BrnT family toxin | - |
| TVNIR_RS03125 () | 620264..620533 | + | 270 | WP_015257521.1 | BrnA antitoxin family protein | - |
| TVNIR_RS03130 () | 620656..621087 | + | 432 | WP_015257522.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| TVNIR_RS03135 () | 621640..621852 | + | 213 | WP_006749149.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| TVNIR_RS03140 () | 622730..623068 | + | 339 | WP_083499329.1 | MarR family EPS-associated transcriptional regulator | - |
| TVNIR_RS03145 () | 623639..624592 | + | 954 | WP_043739189.1 | GDP-L-fucose synthase | VF |
| TVNIR_RS03150 () | 624692..624994 | + | 303 | WP_015257525.1 | type II toxin-antitoxin system HigB family toxin | - |
| TVNIR_RS03155 () | 625006..625377 | + | 372 | WP_015257526.1 | hypothetical protein | - |
| TVNIR_RS03160 () | 625615..626841 | + | 1227 | WP_015257527.1 | GDP-mannose 4,6-dehydratase | VF |
| TVNIR_RS19550 () | 626933..627442 | + | 510 | Protein_641 | MBL fold metallo-hydrolase | - |
| TVNIR_RS19555 () | 627785..628849 | + | 1065 | WP_157092326.1 | MBL fold metallo-hydrolase | - |
| TVNIR_RS03180 () | 628979..629590 | + | 612 | WP_015257529.1 | nucleotidyltransferase domain-containing protein | - |
| TVNIR_RS20125 () | 629750..629995 | + | 246 | WP_015257530.1 | hypothetical protein | - |
| TVNIR_RS03190 () | 630876..631214 | + | 339 | WP_083499330.1 | MarR family EPS-associated transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|