MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 80123 bp
Accession: NC_019265 Location: 1..80123 Organism: Pseudomonas savastanoi Replicon: plasmid pPsv48A
Accession: NC_019265 Location: 1..80123 Organism: Pseudomonas savastanoi Replicon: plasmid pPsv48A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSA3335_RS00005 (PSA3335_A0001) | 1..1302 | + | 1302 | WP_015060644.1 | replication initiation protein | - |
| PSA3335_RS00010 (PSA3335_A0069) | 1569..2798 | - | 1230 | WP_082301212.1 | IS91 family transposase IS801 | Transposase |
| PSA3335_RS00015 | 2848..3060 | - | 213 | WP_244657730.1 | hypothetical protein | - |
| PSA3335_RS00020 (PSA3335_A0002) | 3294..3608 | + | 315 | WP_031598871.1 | HU family DNA-binding protein | - |
| PSA3335_RS00025 (PSA3335_A0003) | 4024..5220 | - | 1197 | WP_244657732.1 | IS91 family transposase IS801 | Transposase |
| PSA3335_RS00030 | 5222..5503 | - | 282 | WP_060407302.1 | hypothetical protein | - |
| PSA3335_RS00035 (PSA3335_A0005) | 5690..13537 | - | 7848 | WP_015060647.1 | XopAD/skwp family type III secretion system effector | - |
| PSA3335_RS00040 (PSA3335_A0007) | 14076..14708 | - | 633 | WP_015060648.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PSA3335_RS00045 (PSA3335_A0008) | 14749..15168 | - | 420 | WP_002556053.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PSA3335_RS00050 (PSA3335_A0009) | 15165..15422 | - | 258 | WP_003381346.1 | Arc family DNA-binding protein | Antitoxin Detail |
| PSA3335_RS00055 | 15575..15856 | + | 282 | WP_060407302.1 | hypothetical protein | - |
| PSA3335_RS00060 (PSA3335_A0011) | 15858..17054 | + | 1197 | WP_237772646.1 | IS91 family transposase IS801 | Transposase |
| PSA3335_RS00065 (PSA3335_A0013) | 17851..19073 | + | 1223 | WP_095178853.1 | IS3 family transposase IS51 | Transposase |
| PSA3335_RS00070 (PSA3335_A0014) | 19110..19796 | - | 687 | WP_244657733.1 | hypothetical protein | - |
| PSA3335_RS00075 (PSA3335_A0015) | 20376..20657 | - | 282 | WP_004666803.1 | hypothetical protein | - |
| PSA3335_RS00080 (PSA3335_A0016) | 20657..21340 | - | 684 | WP_002556051.1 | AAA family ATPase | - |
| PSA3335_RS00085 (PSA3335_A0017) | 21678..21935 | + | 258 | Protein_16 | TraR/DksA family transcriptional regulator | - |
| PSA3335_RS00090 (PSA3335_A0065) | 21973..22194 | + | 222 | WP_015060651.1 | hypothetical protein | - |
| PSA3335_RS00095 (PSA3335_A0018) | 22526..23146 | - | 621 | WP_005747119.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PSA3335_RS00100 (PSA3335_A0019) | 23533..23853 | - | 321 | WP_015060653.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| PSA3335_RS00105 (PSA3335_A0020) | 23780..24109 | - | 330 | WP_015060654.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| PSA3335_RS00110 (PSA3335_A0021) | 24464..25693 | - | 1230 | WP_082301212.1 | IS91 family transposase IS801 | Transposase |
| PSA3335_RS00115 | 25743..25955 | - | 213 | WP_244657730.1 | hypothetical protein | - |
| PSA3335_RS00120 (PSA3335_A0023) | 25997..26899 | + | 903 | WP_168550530.1 | hypothetical protein | - |
| PSA3335_RS00125 | 27083..27316 | + | 234 | WP_053481311.1 | hypothetical protein | - |
| PSA3335_RS00130 (PSA3335_A0024) | 28241..28945 | - | 705 | WP_015060656.1 | isopentenyl transferase family protein | - |
| PSA3335_RS00135 (PSA3335_A0025) | 29058..29672 | - | 615 | WP_015060657.1 | hypothetical protein | - |
| PSA3335_RS00140 | 29675..29851 | - | 177 | WP_179894032.1 | hypothetical protein | - |
| PSA3335_RS00145 (PSA3335_A0026) | 30046..33072 | - | 3027 | WP_015060658.1 | Tn3 family transposase TnpA_ISPsy30 | Transposase |
| PSA3335_RS00150 (PSA3335_A0027) | 33062..33658 | - | 597 | WP_015060659.1 | Tn3 family transposase TnpR_ISPsy30 | Transposase |
| PSA3335_RS00155 | 33690..33881 | + | 192 | WP_168550531.1 | hypothetical protein | - |
| PSA3335_RS00160 (PSA3335_A0028) | 33932..34642 | - | 711 | WP_223227236.1 | XopAF/AvrXv3 family type III secretion system effector | - |
| PSA3335_RS00165 (PSA3335_A0029) | 35270..35521 | + | 252 | Protein_32 | IS21 family transposase ISPpu27 | Transposase |
| PSA3335_RS00170 (PSA3335_A0030) | 35871..36905 | - | 1035 | WP_015060660.1 | IS110 family transposase ISPsy16 | Transposase |
| PSA3335_RS00175 (PSA3335_A0031) | 37068..37343 | - | 276 | WP_015060661.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PSA3335_RS00180 (PSA3335_A0032) | 37343..37615 | - | 273 | WP_015060662.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| PSA3335_RS00185 (PSA3335_A0034) | 38306..39528 | + | 1223 | WP_095178853.1 | IS3 family transposase IS51 | Transposase |
| PSA3335_RS00190 (PSA3335_A0035) | 39573..47420 | - | 7848 | WP_015060663.1 | XopAD/skwp family type III secretion system effector | - |
| PSA3335_RS00195 (PSA3335_A0036) | 47962..48210 | - | 249 | Protein_38 | helix-turn-helix domain-containing protein | - |
| PSA3335_RS00205 | 49436..50014 | - | 579 | WP_168550532.1 | hypothetical protein | VF |
| PSA3335_RS00210 | 50118..50330 | + | 213 | WP_244657730.1 | hypothetical protein | - |
| PSA3335_RS00215 (PSA3335_A0040) | 50380..51609 | + | 1230 | WP_082301212.1 | IS91 family transposase IS801 | Transposase |
| PSA3335_RS00220 (PSA3335_A0041) | 52091..52465 | - | 375 | WP_002556055.1 | histone-like nucleoid-structuring protein, MvaT/MvaU family | - |
| PSA3335_RS00225 (PSA3335_A0042) | 52518..53186 | - | 669 | WP_002556054.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PSA3335_RS00230 (PSA3335_A0043) | 53291..53548 | + | 258 | WP_003381346.1 | Arc family DNA-binding protein | Antitoxin Detail |
| PSA3335_RS00235 (PSA3335_A0044) | 53545..53964 | + | 420 | WP_002556053.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PSA3335_RS00240 (PSA3335_A0045) | 54005..54637 | + | 633 | WP_015060648.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PSA3335_RS00245 (PSA3335_A0046) | 55176..62267 | + | 7092 | WP_015060666.1 | XopAD/skwp family type III secretion system effector | - |
| PSA3335_RS00250 (PSA3335_A0048) | 62335..63557 | + | 1223 | WP_095178853.1 | IS3 family transposase IS51 | Transposase |
| PSA3335_RS00255 | 63618..63956 | + | 339 | WP_168550533.1 | conjugal transfer protein TraR | - |
| PSA3335_RS00260 (PSA3335_A0050) | 64000..64275 | - | 276 | WP_002556011.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PSA3335_RS00265 (PSA3335_A0051) | 64253..64453 | - | 201 | WP_002556012.1 | hypothetical protein | Antitoxin Detail |
| PSA3335_RS00270 (PSA3335_A0052) | 64716..65297 | + | 582 | WP_244657731.1 | conjugal transfer protein TraT | - |
| PSA3335_RS00275 (PSA3335_A0053) | 65272..68328 | + | 3057 | WP_002556014.1 | conjugal transfer protein | - |
| PSA3335_RS00280 (PSA3335_A0054) | 68352..68588 | + | 237 | WP_002556015.1 | hypothetical protein | - |
| PSA3335_RS00285 (PSA3335_A0055) | 68610..68999 | + | 390 | WP_015060667.1 | hypothetical protein | - |
| PSA3335_RS00290 (PSA3335_A0056) | 69005..70225 | + | 1221 | WP_015060668.1 | conjugal transfer protein TraW | - |
| PSA3335_RS00295 (PSA3335_A0057) | 70215..70817 | + | 603 | WP_002556017.1 | conjugal transfer protein TraX | - |
| PSA3335_RS00300 (PSA3335_A0058) | 70844..72859 | + | 2016 | WP_002556018.1 | DotA/TraY family protein | - |
| PSA3335_RS00340 | 72859..72984 | + | 126 | WP_280992820.1 | hypothetical protein | - |
| PSA3335_RS00305 (PSA3335_A0059) | 73033..73683 | + | 651 | WP_002556019.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| PSA3335_RS00310 (PSA3335_A0060) | 73776..74975 | + | 1200 | WP_002556020.1 | hypothetical protein | - |
| PSA3335_RS00315 (PSA3335_A0061) | 75061..76146 | + | 1086 | WP_002556021.1 | thioredoxin fold domain-containing protein | - |
| PSA3335_RS00320 (PSA3335_A0062) | 76133..78421 | + | 2289 | WP_002556022.1 | F-type conjugative transfer protein TrbC | - |
| PSA3335_RS00325 (PSA3335_A0063) | 78435..78743 | + | 309 | Protein_65 | hypothetical protein | - |
| PSA3335_RS00330 (PSA3335_A0064) | 78931..79359 | + | 429 | WP_002556024.1 | GntR family transcriptional regulator | - |
| PSA3335_RS00335 (PSA3335_A0067) | 79579..79776 | + | 198 | WP_010209245.1 | ribbon-helix-helix protein, CopG family | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|