MGE detailed information
MGE type: Genomic_island MGE length: 43719 bp
Accession: NC_017619 Location: 1888857..1932575 Organism: Streptococcus suis SS12 Replicon: chromosome
Accession: NC_017619 Location: 1888857..1932575 Organism: Streptococcus suis SS12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSU12_RS09430 () | 1884799..1887918 | + | 3120 | WP_012775354.1 | LPXTG cell wall anchor domain-containing protein | - |
| SSU12_RS09435 () | 1887998..1888864 | + | 867 | WP_012027852.1 | Hsp33 family molecular chaperone HslO | - |
| SSU12_RS09440 () | 1888857..1889861 | + | 1005 | WP_012775355.1 | tRNA dihydrouridine synthase DusB | - |
| SSU12_RS09445 () | 1890007..1890780 | - | 774 | WP_012027854.1 | NUDIX hydrolase | - |
| SSU12_RS09450 () | 1890773..1891594 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| SSU12_RS09455 () | 1891604..1892641 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| SSU12_RS09460 () | 1892755..1895208 | - | 2454 | WP_012027858.1 | ATP-dependent Clp protease ATP-binding subunit | - |
| SSU12_RS09465 () | 1895214..1895672 | - | 459 | WP_012027859.1 | transcriptional regulator | - |
| SSU12_RS09470 () | 1895822..1896160 | + | 339 | WP_012027860.1 | thiol reductase thioredoxin | - |
| SSU12_RS09475 () | 1896160..1896861 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| SSU12_RS09480 () | 1897124..1898164 | - | 1041 | WP_012027862.1 | elongation factor Ts | - |
| SSU12_RS09485 () | 1898320..1899096 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| SSU12_RS09490 () | 1899443..1899955 | - | 513 | WP_012775452.1 | adenylate kinase | - |
| SSU12_RS09500 () | 1900609..1905687 | - | 5079 | WP_012775357.1 | S8 family serine peptidase | - |
| SSU12_RS09505 () | 1905831..1906370 | - | 540 | WP_002940254.1 | transcription termination/antitermination protein NusG | - |
| SSU12_RS09510 () | 1906480..1906656 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| SSU12_RS09515 () | 1906666..1906818 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| SSU12_RS09520 () | 1906852..1909065 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| SSU12_RS09525 () | 1909218..1910186 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| SSU12_RS09530 () | 1910188..1911036 | + | 849 | WP_014636718.1 | RluA family pseudouridine synthase | - |
| SSU12_RS09535 () | 1911063..1911875 | - | 813 | WP_002938438.1 | pur operon repressor | - |
| SSU12_RS09540 () | 1911977..1912843 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| SSU12_RS09545 () | 1912843..1913784 | - | 942 | WP_012775359.1 | 3'-5' exoribonuclease YhaM family protein | - |
| SSU12_RS09550 () | 1913774..1915012 | - | 1239 | WP_012027874.1 | DNA recombination protein RmuC | - |
| SSU12_RS09555 () | 1915013..1915645 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| SSU12_RS09560 () | 1915638..1916297 | - | 660 | WP_012027876.1 | ribulose-phosphate 3-epimerase | - |
| SSU12_RS09565 () | 1916312..1917187 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| SSU12_RS09580 () | 1918593..1920170 | - | 1578 | WP_012027878.1 | ABC transporter ATP-binding protein/permease | - |
| SSU12_RS09585 () | 1920167..1921414 | - | 1248 | WP_012027879.1 | radical SAM protein | - |
| SSU12_RS09590 () | 1921777..1922640 | - | 864 | WP_012027880.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| SSU12_RS09600 () | 1923130..1925574 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| SSU12_RS09605 () | 1925587..1927317 | - | 1731 | WP_012775361.1 | membrane protein | - |
| SSU12_RS09610 () | 1927682..1928590 | - | 909 | WP_012027884.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| SSU12_RS09615 () | 1928574..1929104 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
| SSU12_RS09620 () | 1929118..1929375 | - | 258 | WP_012775363.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| SSU12_RS09625 () | 1929377..1929637 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| SSU12_RS09630 () | 1929713..1930168 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| SSU12_RS09635 () | 1930175..1930504 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SSU12_RS09640 () | 1930494..1930781 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| SSU12_RS09645 () | 1930879..1931247 | - | 369 | WP_012775453.1 | hypothetical protein | - |
| SSU12_RS09650 () | 1931240..1931809 | - | 570 | WP_012775366.1 | ribonuclease M5 | - |
| SSU12_RS09655 () | 1931793..1932575 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| SSU12_RS09660 () | 1932682..1932819 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| SSU12_RS09665 () | 1932987..1933982 | - | 996 | WP_012775367.1 | protein jag | - |
| SSU12_RS09670 () | 1934002..1934814 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| SSU12_RS09675 () | 1934798..1935157 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| SSU12_RS09680 () | 1935228..1936622 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0 |