MGE detailed information
MGE type: Genomic_island MGE length: 43227 bp
Accession: NC_017617 Location: 1819684..1862910 Organism: Streptococcus suis GZ1 Replicon: chromosome
Accession: NC_017617 Location: 1819684..1862910 Organism: Streptococcus suis GZ1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSGZ1_RS08985 () | 1815626..1818745 | + | 3120 | WP_012775354.1 | LPXTG cell wall anchor domain-containing protein | - |
| SSGZ1_RS08990 () | 1818825..1819691 | + | 867 | WP_012027852.1 | Hsp33 family molecular chaperone HslO | - |
| SSGZ1_RS08995 () | 1819684..1820688 | + | 1005 | WP_012775355.1 | tRNA dihydrouridine synthase DusB | - |
| SSGZ1_RS09000 () | 1820834..1821607 | - | 774 | WP_012027854.1 | NUDIX hydrolase | - |
| SSGZ1_RS09005 () | 1821600..1822421 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| SSGZ1_RS09010 () | 1822431..1823468 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| SSGZ1_RS09015 () | 1823582..1826035 | - | 2454 | WP_012027858.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| SSGZ1_RS09020 () | 1826041..1826499 | - | 459 | WP_012027859.1 | transcriptional regulator | - |
| SSGZ1_RS09025 () | 1826649..1826987 | + | 339 | WP_012027860.1 | thiol reductase thioredoxin | - |
| SSGZ1_RS09030 () | 1826987..1827688 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| SSGZ1_RS09035 () | 1827951..1828991 | - | 1041 | WP_012027862.1 | elongation factor Ts | - |
| SSGZ1_RS09040 () | 1829147..1829923 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| SSGZ1_RS09045 () | 1830270..1830782 | - | 513 | WP_012775452.1 | adenylate kinase | - |
| SSGZ1_RS09055 () | 1831436..1836514 | - | 5079 | WP_012775357.1 | S8 family serine peptidase | - |
| SSGZ1_RS09060 () | 1836658..1837196 | - | 539 | Protein_1733 | transcription termination/antitermination protein NusG | - |
| SSGZ1_RS09065 () | 1837306..1837482 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| SSGZ1_RS09070 () | 1837492..1837644 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| SSGZ1_RS09075 () | 1837678..1839891 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| SSGZ1_RS09080 () | 1840044..1841012 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| SSGZ1_RS09085 () | 1841014..1841880 | + | 867 | WP_012027870.1 | RluA family pseudouridine synthase | - |
| SSGZ1_RS09090 () | 1841907..1842719 | - | 813 | WP_002938438.1 | pur operon repressor | - |
| SSGZ1_RS09095 () | 1842821..1843687 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| SSGZ1_RS09100 () | 1843687..1844628 | - | 942 | WP_012775359.1 | 3'-5' exoribonuclease YhaM family protein | - |
| SSGZ1_RS09105 () | 1844618..1845856 | - | 1239 | WP_012027874.1 | DNA recombination protein RmuC | - |
| SSGZ1_RS09110 () | 1845857..1846489 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| SSGZ1_RS09115 () | 1846482..1847141 | - | 660 | WP_012027876.1 | Ribulose-phosphate 3-epimerase | VF |
| SSGZ1_RS09120 () | 1847156..1848031 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| SSGZ1_RS09130 () | 1848928..1850505 | - | 1578 | WP_012027878.1 | ABC transporter ATP-binding protein/permease | - |
| SSGZ1_RS09135 () | 1850502..1851749 | - | 1248 | WP_012027879.1 | radical SAM protein | - |
| SSGZ1_RS09140 () | 1852112..1852975 | - | 864 | WP_012027880.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| SSGZ1_RS09150 () | 1853465..1855909 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| SSGZ1_RS09155 () | 1855922..1857653 | - | 1732 | Protein_1750 | hypothetical protein | - |
| SSGZ1_RS09160 () | 1858018..1858926 | - | 909 | WP_012027884.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| SSGZ1_RS09165 () | 1858910..1859380 | - | 471 | WP_014636158.1 | DUF1697 domain-containing protein | - |
| SSGZ1_RS09170 () | 1859453..1859704 | - | 252 | WP_041179125.1 | Txe/YoeB family addiction module toxin | - |
| SSGZ1_RS09175 () | 1859713..1859972 | - | 260 | Protein_1754 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| SSGZ1_RS09180 () | 1860048..1860503 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| SSGZ1_RS09185 () | 1860510..1860839 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SSGZ1_RS09190 () | 1860829..1861116 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| SSGZ1_RS09195 () | 1861214..1861582 | - | 369 | WP_012775453.1 | hypothetical protein | - |
| SSGZ1_RS09200 () | 1861575..1862144 | - | 570 | WP_012775366.1 | ribonuclease M5 | - |
| SSGZ1_RS09205 () | 1862128..1862910 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| SSGZ1_RS09210 () | 1863017..1863154 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| SSGZ1_RS09215 () | 1863322..1864317 | - | 996 | WP_012775367.1 | protein jag | - |
| SSGZ1_RS09220 () | 1864337..1865149 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| SSGZ1_RS09225 () | 1865133..1865492 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| SSGZ1_RS09230 () | 1865563..1866957 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0 |