MGE detailed information
MGE type: Genomic_island MGE length: 43228 bp
Accession: NC_012926 Location: 1925244..1968471 Organism: Streptococcus suis BM407 Replicon: chromosome
Accession: NC_012926 Location: 1925244..1968471 Organism: Streptococcus suis BM407 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSUBM407_RS09425 () | 1921186..1924305 | + | 3120 | WP_012775697.1 | LPXTG cell wall anchor domain-containing protein | - |
| SSUBM407_RS09430 () | 1924385..1925251 | + | 867 | WP_012027852.1 | Hsp33 family molecular chaperone HslO | - |
| SSUBM407_RS09435 () | 1925244..1926248 | + | 1005 | WP_012775355.1 | tRNA dihydrouridine synthase DusB | - |
| SSUBM407_RS09440 () | 1926394..1927167 | - | 774 | WP_012027854.1 | NUDIX hydrolase | - |
| SSUBM407_RS09445 () | 1927160..1927981 | - | 822 | WP_012027855.1 | nicotinamide riboside transporter PnuC | - |
| SSUBM407_RS09450 () | 1927991..1929028 | - | 1038 | WP_012028524.1 | AAA family ATPase | - |
| SSUBM407_RS09455 () | 1929142..1931595 | - | 2454 | WP_012027858.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VF |
| SSUBM407_RS09460 () | 1931601..1932059 | - | 459 | WP_012027859.1 | transcriptional regulator | - |
| SSUBM407_RS09465 () | 1932209..1932547 | + | 339 | WP_012027860.1 | thiol reductase thioredoxin | - |
| SSUBM407_RS09470 () | 1932547..1933248 | + | 702 | WP_012027861.1 | hypothetical protein | - |
| SSUBM407_RS09475 () | 1933511..1934551 | - | 1041 | WP_012775698.1 | elongation factor Ts | - |
| SSUBM407_RS09480 () | 1934707..1935483 | - | 777 | WP_012775356.1 | 30S ribosomal protein S2 | - |
| SSUBM407_RS09485 () | 1935830..1936342 | - | 513 | WP_012775452.1 | adenylate kinase | - |
| SSUBM407_RS09495 () | 1936996..1942074 | - | 5079 | WP_012775357.1 | S8 family serine peptidase | - |
| SSUBM407_RS09500 () | 1942218..1942757 | - | 540 | WP_002940254.1 | transcription termination/antitermination protein NusG | - |
| SSUBM407_RS09505 () | 1942867..1943043 | - | 177 | WP_002940255.1 | preprotein translocase subunit SecE | - |
| SSUBM407_RS09510 () | 1943053..1943205 | - | 153 | WP_002940258.1 | 50S ribosomal protein L33 | - |
| SSUBM407_RS09515 () | 1943239..1945452 | - | 2214 | WP_012027868.1 | penicillin-binding protein PBP2A | - |
| SSUBM407_RS09520 () | 1945605..1946573 | + | 969 | WP_012027869.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| SSUBM407_RS09525 () | 1946575..1947441 | + | 867 | WP_012027870.1 | RluA family pseudouridine synthase | - |
| SSUBM407_RS09530 () | 1947468..1948280 | - | 813 | WP_002938438.1 | pur operon repressor | - |
| SSUBM407_RS09535 () | 1948382..1949248 | - | 867 | WP_012027872.1 | phosphotransferase | - |
| SSUBM407_RS09540 () | 1949248..1950189 | - | 942 | WP_012775359.1 | 3'-5' exoribonuclease YhaM family protein | - |
| SSUBM407_RS09545 () | 1950179..1951417 | - | 1239 | WP_012775699.1 | DNA recombination protein RmuC | - |
| SSUBM407_RS09550 () | 1951418..1952050 | - | 633 | WP_012027875.1 | thiamine diphosphokinase | - |
| SSUBM407_RS09555 () | 1952043..1952702 | - | 660 | WP_012027876.1 | Ribulose-phosphate 3-epimerase | VF |
| SSUBM407_RS09560 () | 1952717..1953592 | - | 876 | WP_012027877.1 | ribosome small subunit-dependent GTPase A | - |
| SSUBM407_RS09570 () | 1954489..1956066 | - | 1578 | WP_012027878.1 | ABC transporter ATP-binding protein/permease | - |
| SSUBM407_RS09575 () | 1956063..1957310 | - | 1248 | WP_012027879.1 | radical SAM protein | - |
| SSUBM407_RS09580 () | 1957673..1958536 | - | 864 | WP_012027880.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| SSUBM407_RS09585 () | 1959026..1961470 | - | 2445 | WP_012027881.1 | alkaline phosphatase family protein | - |
| SSUBM407_RS09590 () | 1961483..1963213 | - | 1731 | WP_012775361.1 | membrane protein | - |
| SSUBM407_RS09595 () | 1963578..1964486 | - | 909 | WP_012027884.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
| SSUBM407_RS09600 () | 1964470..1965000 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
| SSUBM407_RS09605 () | 1965014..1965271 | - | 258 | WP_012775363.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| SSUBM407_RS09610 () | 1965273..1965533 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| SSUBM407_RS09615 () | 1965609..1966064 | - | 456 | WP_012028534.1 | 8-oxo-dGTP diphosphatase | - |
| SSUBM407_RS09620 () | 1966071..1966400 | - | 330 | WP_012775364.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SSUBM407_RS09625 () | 1966390..1966677 | - | 288 | WP_012028535.1 | hypothetical protein | Antitoxin Detail |
| SSUBM407_RS09630 () | 1966775..1967143 | - | 369 | WP_012775453.1 | hypothetical protein | - |
| SSUBM407_RS09635 () | 1967136..1967705 | - | 570 | WP_012775700.1 | ribonuclease M5 | - |
| SSUBM407_RS09640 () | 1967689..1968471 | - | 783 | WP_012028536.1 | TatD family hydrolase | - |
| SSUBM407_RS09645 () | 1968578..1968715 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
| SSUBM407_RS09650 () | 1968883..1969878 | - | 996 | WP_012775367.1 | protein jag | - |
| SSUBM407_RS09655 () | 1969898..1970710 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
| SSUBM407_RS09660 () | 1970694..1971053 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
| SSUBM407_RS09665 () | 1971124..1972518 | - | 1395 | WP_012027899.1 | argininosuccinate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus suis SC84 | Genomic island | TA6281, TA10159 | NC_012924 | 1874993..1918220 | 0 | |
| Streptococcus suis strain ZY05719 isolate diseased pig | Genomic island | TA46538, TA46539 | NZ_CP007497 | 1873994..1917221 | 0 |