MGE detailed information
MGE type: Integron MGE length: 21863 bp
Accession: NC_011313 Location: 593499..615361 Organism: Aliivibrio salmonicida LFI1238 Replicon: chromosome
Accession: NC_011313 Location: 593499..615361 Organism: Aliivibrio salmonicida LFI1238 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VSAL_RS18835 () | 589458..590818 | + | 1361 | Protein_539 | Cache 3/Cache 2 fusion domain-containing protein | - |
| VSAL_RS18840 () | 590879..591079 | + | 201 | WP_012551853.1 | hypothetical protein | - |
| VSAL_RS18845 () | 591174..591878 | - | 705 | WP_012551854.1 | hypothetical protein | - |
| VSAL_RS18850 () | 592028..592453 | + | 426 | WP_023604663.1 | hotdog fold thioesterase | - |
| VSAL_RS18855 () | 592475..593299 | + | 825 | WP_012551856.1 | HDOD domain-containing protein | - |
| VSAL_RS23630 () | 593319..593474 | + | 156 | WP_162467884.1 | hypothetical protein | - |
| VSAL_RS18860 () | 593499..594482 | - | 984 | WP_012551858.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| VSAL_RS22980 () | 594854..595999 | + | 1146 | Protein_546 | IS91 family transposase ISVsa10 | Transposase |
| VSAL_RS18870 () | 598055..598810 | + | 756 | WP_012551859.1 | membrane protein | - |
| VSAL_RS18875 () | 599012..599725 | + | 714 | WP_012551860.1 | RES family NAD+ phosphorylase | - |
| VSAL_RS18880 () | 599883..600317 | + | 435 | WP_044583568.1 | hypothetical protein | VF |
| VSAL_RS18885 () | 600548..600817 | + | 270 | WP_044583569.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| VSAL_RS18890 () | 600814..601344 | + | 531 | WP_012551863.1 | GNAT family N-acetyltransferase | Toxin Detail |
| VSAL_RS18895 () | 601353..602048 | + | 696 | WP_012551864.1 | hypothetical protein | - |
| VSAL_RS18900 () | 602236..602490 | + | 255 | WP_012551865.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| VSAL_RS18905 () | 602481..602795 | + | 315 | WP_012551866.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| VSAL_RS18910 () | 603039..603389 | + | 351 | WP_012551867.1 | cupin domain-containing protein | - |
| VSAL_RS18915 () | 603629..604099 | + | 471 | WP_012551868.1 | hypothetical protein | - |
| VSAL_RS18920 () | 604092..604694 | + | 603 | WP_012551869.1 | putative adenosine monophosphate-protein transferase fic | VF |
| VSAL_RS18925 () | 605386..605655 | - | 270 | WP_012551870.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| VSAL_RS18930 () | 605648..605926 | - | 279 | WP_012551871.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| VSAL_RS18935 () | 606153..607745 | - | 1593 | WP_012551872.1 | RNA-directed DNA polymerase | - |
| VSAL_RS23570 () | 608314..608508 | - | 195 | WP_012551874.1 | hypothetical protein | - |
| VSAL_RS23575 () | 608674..608847 | + | 174 | WP_012551875.1 | hypothetical protein | - |
| VSAL_RS18945 () | 609002..609886 | + | 885 | WP_012551876.1 | GIY-YIG nuclease family protein | - |
| VSAL_RS18950 () | 610662..610913 | + | 252 | WP_012551877.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| VSAL_RS18955 () | 610910..611170 | + | 261 | WP_012551878.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| VSAL_RS18960 () | 611947..613092 | + | 1146 | WP_012551880.1 | IS91 family transposase ISVsa10 | Transposase |
| VSAL_RS18965 () | 613475..613732 | + | 258 | WP_012551881.1 | DUF4160 domain-containing protein | Toxin Detail |
| VSAL_RS18970 () | 613740..614264 | + | 525 | WP_012551882.1 | DUF2442 domain-containing protein | Antitoxin Detail |
| VSAL_RS18975 () | 614957..615361 | + | 405 | WP_012551883.1 | hypothetical protein | - |
| VSAL_RS18985 () | 615528..616672 | + | 1145 | WP_085941879.1 | IS3 family transposase | - |
| VSAL_RS23010 () | 616741..616977 | + | 237 | Protein_571 | transposase | - |
| VSAL_RS18990 () | 617151..617399 | + | 249 | WP_012551886.1 | DUF3297 family protein | - |
| VSAL_RS18995 () | 617672..618961 | + | 1290 | WP_044583649.1 | DEAD/DEAH box helicase | - |
| VSAL_RS19000 () | 619300..619827 | + | 528 | WP_012551888.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|