MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 131950 bp
Accession: NC_007274 Location: 1..131950 Organism: Pseudomonas syringae pv. phaseolicola 1448A Replicon: plasmid largeplasmid
Accession: NC_007274 Location: 1..131950 Organism: Pseudomonas syringae pv. phaseolicola 1448A Replicon: plasmid largeplasmid
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSPPH_RS26495 () | 304..1617 | + | 1314 | WP_032489053.1 | replication initiation protein | - |
| PSPPH_RS26500 () | 1747..2627 | - | 881 | Protein_1 | IS91 family transposase IS801 | Transposase |
| PSPPH_RS26505 () | 2807..2995 | + | 189 | WP_002556028.1 | hypothetical protein | Antitoxin Detail |
| PSPPH_RS26510 () | 2995..3276 | + | 282 | WP_002556029.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PSPPH_RS26515 () | 3428..4975 | - | 1548 | WP_041924905.1 | glycoside hydrolase family 28 protein | - |
| PSPPH_RS26520 () | 5059..5283 | - | 225 | WP_041924893.1 | carbon storage regulator | - |
| PSPPH_RS26525 () | 5387..5569 | - | 183 | WP_004661237.1 | hypothetical protein | - |
| PSPPH_RS29585 () | 5999..6313 | - | 315 | WP_081002620.1 | hypothetical protein | - |
| PSPPH_RS29590 () | 6412..6696 | - | 285 | WP_011282457.1 | type III effector HopW1-1, truncated | - |
| PSPPH_RS26535 () | 7147..9279 | + | 2133 | WP_011282444.1 | type III secretion system effector HopD1 | - |
| PSPPH_RS26540 () | 9395..10618 | - | 1224 | WP_041924895.1 | type III secretion system effector HopQ1-1 | - |
| PSPPH_RS26545 () | 10876..12100 | + | 1225 | Protein_11 | IS91 family transposase ISPsy3 | Transposase |
| PSPPH_RS26550 () | 12234..12824 | - | 591 | Protein_12 | IS256 family transposase ISPsy17 | Transposase |
| PSPPH_RS26555 () | 13010..13901 | - | 892 | Protein_13 | IS91 family transposase ISPsy3 | Transposase |
| PSPPH_RS31140 () | 14050..14130 | - | 81 | Protein_14 | IS91 family transposase ISPsy3 | Transposase |
| PSPPH_RS26560 () | 14128..14471 | - | 344 | Protein_15 | IS91 family transposase ISPsy3 | Transposase |
| PSPPH_RS29605 () | 14859..16175 | - | 1317 | WP_011282482.1 | hypothetical protein | - |
| PSPPH_RS29610 () | 16178..16594 | - | 417 | WP_011282483.1 | hypothetical protein | - |
| PSPPH_RS31145 () | 17769..17933 | - | 165 | Protein_18 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PSPPH_RS26575 () | 18141..18418 | + | 278 | Protein_19 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PSPPH_RS26580 () | 18418..18705 | + | 288 | WP_005622028.1 | helix-turn-helix domain-containing protein | - |
| PSPPH_RS26585 () | 18767..19180 | + | 414 | WP_011282452.1 | hypothetical protein | - |
| PSPPH_RS26590 () | 19415..19627 | + | 213 | Protein_22 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| PSPPH_RS26595 () | 20434..20778 | + | 345 | WP_054082685.1 | hypothetical protein | - |
| PSPPH_RS26600 () | 20926..22221 | - | 1296 | WP_011282490.1 | glycoside hydrolase family 68 protein | - |
| PSPPH_RS26605 () | 22233..22424 | - | 192 | WP_003381760.1 | Com family DNA-binding transcriptional regulator | - |
| PSPPH_RS29640 () | 22461..22670 | + | 210 | Protein_26 | hypothetical protein | - |
| PSPPH_RS26610 () | 22914..24863 | - | 1950 | WP_011282440.1 | hypothetical protein | VF |
| PSPPH_RS26615 () | 25063..25578 | + | 516 | Protein_28 | IS110 family transposase ISPsy16 | Transposase |
| PSPPH_RS26620 () | 26340..28610 | + | 2271 | WP_032704248.1 | hypothetical protein | - |
| PSPPH_RS30235 () | 28613..28783 | - | 171 | Protein_30 | IS3 family transposase ISPen2 | Transposase |
| PSPPH_RS26630 () | 29016..29360 | + | 345 | Protein_31 | conjugal transfer protein | - |
| PSPPH_RS26635 () | 29350..29727 | - | 378 | WP_003344395.1 | PIN domain-containing protein | Toxin Detail |
| PSPPH_RS26640 () | 29724..29924 | - | 201 | WP_004644067.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| PSPPH_RS26645 () | 30016..30696 | + | 681 | Protein_34 | hypothetical protein | - |
| PSPPH_RS26650 () | 30683..30952 | + | 270 | Protein_35 | type IV secretory system conjugative DNA transfer family protein | - |
| PSPPH_RS26655 () | 31210..32442 | - | 1233 | Protein_36 | IS91 family transposase IS801 | Transposase |
| PSPPH_RS26660 () | 32654..32884 | + | 231 | WP_019331426.1 | hypothetical protein | - |
| PSPPH_RS26665 () | 32974..33513 | + | 540 | WP_050772298.1 | hypothetical protein | - |
| PSPPH_RS26670 () | 34374..36404 | - | 2031 | WP_011282448.1 | IS66 family transposase ISPsy43 | VF |
| PSPPH_RS26675 () | 37268..37603 | - | 336 | Protein_40 | hypothetical protein | - |
| PSPPH_RS26680 () | 37785..39017 | - | 1233 | Protein_41 | IS91 family transposase IS801 | Transposase |
| PSPPH_RS26685 () | 39119..39892 | - | 774 | Protein_42 | HNH endonuclease | - |
| PSPPH_RS26690 () | 40090..40719 | + | 630 | WP_004666923.1 | AAA family ATPase | - |
| PSPPH_RS26695 () | 40740..40958 | + | 219 | WP_011282472.1 | chromosome partitioning protein ParB | - |
| PSPPH_RS26700 () | 41289..41570 | + | 282 | Protein_45 | SOS response-associated peptidase family protein | - |
| PSPPH_RS26705 () | 41875..42357 | + | 483 | Protein_46 | IS21 family transposase ISAri1 | Transposase |
| PSPPH_RS26710 () | 42815..43054 | + | 240 | WP_041924897.1 | ribbon-helix-helix domain-containing protein | - |
| PSPPH_RS26715 () | 43054..43464 | + | 411 | WP_011282461.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| PSPPH_RS29660 () | 43468..43617 | + | 150 | Protein_49 | DUF4158 domain-containing protein | - |
| PSPPH_RS26720 () | 43799..45031 | - | 1233 | Protein_50 | IS91 family transposase IS801 | Transposase |
| PSPPH_RS26735 () | 46036..48066 | + | 2031 | WP_038820374.1 | hypothetical protein | - |
| PSPPH_RS30245 () | 48327..48587 | - | 261 | Protein_52 | IS3 family transposase | - |
| PSPPH_RS30250 () | 48770..48895 | - | 126 | Protein_53 | IS5/IS1182 family transposase | - |
| PSPPH_RS29675 () | 48891..49151 | - | 261 | WP_081004486.1 | DUF2513 domain-containing protein | - |
| PSPPH_RS26755 () | 49335..50485 | + | 1151 | WP_086004872.1 | IS3 family transposase ISPsy29 | Transposase |
| PSPPH_RS26760 () | 50672..51670 | + | 999 | WP_011282438.1 | LysR family transcriptional regulator | - |
| PSPPH_RS26765 () | 51922..52659 | + | 738 | WP_011282422.1 | Chaperone protein caf1M | VF |
| PSPPH_RS26770 () | 52693..55188 | + | 2496 | WP_011282475.1 | F1 capsule-anchoring protein | VF |
| PSPPH_RS26775 () | 55181..55630 | + | 450 | WP_011282491.1 | invasin protein AfaD | - |
| PSPPH_RS29680 () | 55705..56265 | + | 561 | WP_054073162.1 | hypothetical protein | - |
| PSPPH_RS26780 () | 57374..58477 | + | 1104 | WP_011282424.1 | IS5 family transposase ISPsy19 | Transposase |
| PSPPH_RS26785 () | 58764..59399 | + | 636 | WP_011282469.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PSPPH_RS26790 () | 59577..59765 | + | 189 | WP_002556028.1 | hypothetical protein | Antitoxin Detail |
| PSPPH_RS26795 () | 59765..60046 | + | 282 | WP_002556029.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PSPPH_RS26800 () | 60198..61745 | - | 1548 | WP_041924905.1 | glycoside hydrolase family 28 protein | - |
| PSPPH_RS26805 () | 61829..62053 | - | 225 | WP_041924893.1 | carbon storage regulator | - |
| PSPPH_RS26810 () | 62157..62339 | - | 183 | WP_004661237.1 | hypothetical protein | - |
| PSPPH_RS29695 () | 62769..63083 | - | 315 | WP_081002620.1 | hypothetical protein | - |
| PSPPH_RS29700 () | 63182..63466 | - | 285 | WP_011282457.1 | type III effector HopW1-1, truncated | - |
| PSPPH_RS26820 () | 63629..63904 | - | 276 | Protein_70 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| PSPPH_RS26825 () | 64354..64803 | - | 450 | WP_005760341.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| PSPPH_RS26830 () | 65278..66510 | - | 1233 | Protein_72 | IS91 family transposase IS801 | Transposase |
| PSPPH_RS26835 () | 66631..66834 | - | 204 | Protein_73 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| PSPPH_RS26840 () | 66931..68544 | - | 1614 | WP_041924899.1 | Methyl-accepting chemotaxis protein CtpH | VF |
| PSPPH_RS26845 () | 68971..70074 | - | 1104 | WP_011282424.1 | IS5 family transposase ISPsy19 | Transposase |
| PSPPH_RS30255 () | 70227..70673 | + | 447 | Protein_76 | IS91 family transposase ISPsy3 | Transposase |
| PSPPH_RS26850 () | 70674..71360 | + | 687 | Protein_77 | IS91 family transposase ISPsy3 | Transposase |
| PSPPH_RS26855 () | 71644..72876 | + | 1233 | WP_011282451.1 | IS91 family transposase IS801 | Transposase |
| PSPPH_RS26860 () | 73057..74058 | - | 1002 | Protein_79 | IS110 family transposase ISPsy16 | Transposase |
| PSPPH_RS26865 () | 74169..74858 | - | 690 | Protein_80 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| PSPPH_RS26870 () | 74866..75520 | - | 655 | Protein_81 | hypothetical protein | - |
| PSPPH_RS26875 () | 75990..76655 | - | 666 | WP_011282487.1 | hypothetical protein | - |
| PSPPH_RS26880 () | 76913..77134 | - | 222 | Protein_83 | hypothetical protein | - |
| PSPPH_RS30985 () | 78689..78991 | + | 303 | WP_050772301.1 | hypothetical protein | - |
| PSPPH_RS27585 () | 78948..80273 | + | 1326 | WP_011282502.1 | SIR2 family protein | - |
| PSPPH_RS27590 () | 80289..81113 | + | 825 | WP_134933068.1 | hypothetical protein | - |
| PSPPH_RS26900 () | 81131..82093 | - | 963 | WP_011282488.1 | IS91 family transposase ISTha3 | Transposase |
| PSPPH_RS26905 () | 82424..82672 | + | 249 | WP_004662018.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PSPPH_RS26910 () | 82685..83035 | + | 351 | WP_004666861.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PSPPH_RS30990 () | 84195..84359 | + | 165 | WP_004666862.1 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| PSPPH_RS26920 () | 84470..85504 | + | 1035 | WP_004667812.1 | IS110 family transposase ISPsy16 | Transposase |
| PSPPH_RS26925 () | 86076..88025 | + | 1950 | WP_011282440.1 | hypothetical protein | VF |
| PSPPH_RS26930 () | 88114..89217 | + | 1104 | WP_004663854.1 | IS5 family transposase ISPsy19 | Transposase |
| PSPPH_RS26935 () | 89254..89865 | + | 612 | WP_011282455.1 | Tn3 family transposase ISPsy39 | Transposase |
| PSPPH_RS26940 () | 89935..90222 | + | 288 | WP_004661624.1 | hypothetical protein | - |
| PSPPH_RS26945 () | 90222..90500 | + | 279 | WP_004661626.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| PSPPH_RS26950 () | 90889..91125 | - | 237 | WP_004667076.1 | carbon storage regulator | - |
| PSPPH_RS26955 () | 91331..91909 | - | 579 | WP_004661630.1 | AAA family ATPase | - |
| PSPPH_RS26960 () | 91909..92565 | - | 657 | WP_007247578.1 | hypothetical protein | - |
| PSPPH_RS26965 () | 92602..93804 | - | 1203 | WP_081002653.1 | aspartate aminotransferase family protein | - |
| PSPPH_RS26970 () | 93845..94879 | - | 1035 | WP_004661635.1 | sulfotransferase | - |
| PSPPH_RS26975 () | 94897..95817 | - | 921 | WP_005620530.1 | TauD/TfdA family dioxygenase | - |
| PSPPH_RS26980 () | 95963..96610 | - | 648 | WP_004667074.1 | histidine phosphatase family protein | - |
| PSPPH_RS26985 () | 96851..97786 | - | 936 | WP_011282454.1 | syringolide biosynthetic protein AvrD1 | - |
| PSPPH_RS30260 () | 98082..98240 | + | 159 | Protein_106 | IS3 family transposase ISPsy24 | Transposase |
| PSPPH_RS26990 () | 98382..98846 | - | 465 | Protein_107 | IS256 family transposase ISPsy17 | Transposase |
| PSPPH_RS26995 () | 99339..99995 | + | 657 | Protein_108 | IS256 family transposase ISPsy17 | Transposase |
| PSPPH_RS27000 () | 100058..100765 | - | 708 | Protein_109 | IS5 family transposase ISPsy2 | Transposase |
| PSPPH_RS27010 () | 101220..101975 | + | 756 | Protein_110 | IS91 family transposase IS801 | Transposase |
| PSPPH_RS30065 () | 101974..102333 | - | 360 | Protein_111 | transposase zinc-binding domain-containing protein | - |
| PSPPH_RS27020 () | 102433..103491 | - | 1059 | WP_011282442.1 | avirulence protein | - |
| PSPPH_RS29740 () | 104524..104764 | + | 241 | Protein_113 | recombinase family protein | - |
| PSPPH_RS29745 () | 104814..105470 | - | 657 | WP_011282458.1 | YopT-type cysteine protease domain-containing protein | - |
| PSPPH_RS30995 () | 105780..106677 | - | 898 | Protein_115 | ExeA family protein | - |
| PSPPH_RS31000 () | 106665..106814 | - | 150 | WP_011282493.1 | hypothetical protein | - |
| PSPPH_RS29755 () | 106837..106941 | + | 105 | Protein_117 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| PSPPH_RS30265 () | 107107..108726 | - | 1620 | WP_011282445.1 | type III secretion system effector protein HopAB1 | - |
| PSPPH_RS27035 () | 109179..110213 | - | 1035 | WP_011168770.1 | IS110 family transposase ISPsy16 | Transposase |
| PSPPH_RS31005 () | 110324..110488 | - | 165 | WP_178114231.1 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| PSPPH_RS27040 () | 110821..111642 | + | 822 | WP_041924904.1 | C58 family peptidase | - |
| PSPPH_RS29770 () | 111681..111869 | + | 189 | Protein_122 | helix-turn-helix domain-containing protein | - |
| PSPPH_RS31150 () | 111873..112085 | + | 213 | Protein_123 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| PSPPH_RS29780 () | 112083..112582 | + | 500 | Protein_124 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| PSPPH_RS27060 () | 112693..113727 | + | 1035 | WP_011168770.1 | IS110 family transposase ISPsy16 | Transposase |
| PSPPH_RS27065 () | 114025..120480 | - | 6456 | WP_011282500.1 | hypothetical protein | - |
| PSPPH_RS27070 () | 121048..121680 | - | 633 | WP_004666965.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| PSPPH_RS27075 () | 121721..122140 | - | 420 | WP_004661570.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| PSPPH_RS27080 () | 122137..122394 | - | 258 | WP_003381346.1 | Arc family DNA-binding protein | Antitoxin Detail |
| PSPPH_RS27085 () | 122859..123563 | + | 705 | WP_004661990.1 | ParA family protein | - |
| PSPPH_RS27090 () | 123560..123883 | + | 324 | WP_004666942.1 | hypothetical protein | - |
| PSPPH_RS29790 () | 123994..124353 | + | 360 | Protein_132 | SOS response-associated peptidase family protein | - |
| PSPPH_RS27095 () | 124306..124968 | - | 663 | Protein_133 | IS110 family transposase | - |
| PSPPH_RS27100 () | 125043..125942 | + | 900 | Protein_134 | IS3 family transposase ISPsy24 | Transposase |
| PSPPH_RS27105 () | 125953..126162 | - | 210 | Protein_135 | hypothetical protein | - |
| PSPPH_RS27110 () | 126280..126606 | - | 327 | WP_003319696.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| PSPPH_RS27115 () | 126603..126827 | - | 225 | WP_004643921.1 | antitoxin MazE family protein | Antitoxin Detail |
| PSPPH_RS27120 () | 127165..127586 | + | 422 | Protein_138 | IS3 family transposase ISPsy29 | Transposase |
| PSPPH_RS27125 () | 127806..129581 | + | 1776 | Protein_139 | conjugal transfer protein | - |
| PSPPH_RS27135 () | 129821..130069 | + | 249 | Protein_140 | hypothetical protein | VF |
| PSPPH_RS27140 () | 130059..130592 | + | 534 | Protein_141 | hypothetical protein | VF |
| PSPPH_RS27145 () | 130713..131363 | + | 651 | WP_005730296.1 | AAA family ATPase | - |
| PSPPH_RS27150 () | 131354..131707 | + | 354 | WP_005730297.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|