MGE detailed information
MGE type: Prophage MGE length: 26444 bp
Accession: NC_002488 Location: 1514347..1540790 Organism: Xylella fastidiosa 9a5c Replicon: chromosome
Accession: NC_002488 Location: 1514347..1540790 Organism: Xylella fastidiosa 9a5c Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XF_RS06560 (XF1552) | 1509414..1510682 | - | 1269 | WP_010894051.1 | cupin domain-containing protein | - |
| XF_RS06565 (XF1553) | 1510853..1512220 | - | 1368 | WP_010894052.1 | adenylosuccinate lyase | - |
| XF_RS06570 | 1512588..1512728 | + | 141 | WP_155114991.1 | hypothetical protein | - |
| XF_RS06575 (XF1554) | 1512833..1514242 | + | 1410 | WP_010894053.1 | class II fumarate hydratase | - |
| XF_RS14650 (XF1555) | 1514391..1515383 | - | 993 | Protein_1280 | hypothetical protein ; Integrase | Integrase |
| XF_RS13275 (XF1557) | 1515383..1515631 | - | 249 | WP_010894056.1 | DUF4224 domain-containing protein | - |
| XF_RS06585 (XF1558) | 1515650..1515889 | - | 240 | WP_010894057.1 | single-stranded DNA-binding protein | - |
| XF_RS06590 (XF1559) | 1515868..1516266 | + | 399 | Protein_1283 | hypothetical protein | - |
| XF_RS06595 (XF1560) | 1516263..1517150 | + | 888 | WP_042463158.1 | YdaU family protein | - |
| XF_RS06600 | 1517056..1517820 | + | 765 | WP_195780003.1 | hypothetical protein | - |
| XF_RS06605 | 1517817..1518230 | + | 414 | WP_195780004.1 | hypothetical protein | - |
| XF_RS06610 (XF1561) | 1518250..1518948 | + | 699 | WP_042463164.1 | hypothetical protein | - |
| XF_RS06615 (XF1562) | 1519136..1519402 | + | 267 | WP_010894061.1 | BrnT family toxin | - |
| XF_RS06620 (XF1563) | 1519389..1519727 | + | 339 | WP_004085696.1 | BrnA antitoxin family protein | - |
| XF_RS06625 (XF1564) | 1519931..1520428 | + | 498 | WP_042463169.1 | lysozyme | - |
| XF_RS06630 (XF1565) | 1520421..1520750 | + | 330 | WP_010894063.1 | phage holin family protein | - |
| XF_RS06635 (XF1566) | 1520740..1521201 | + | 462 | WP_010894064.1 | hypothetical protein | - |
| XF_RS06640 (XF1567) | 1521203..1521415 | + | 213 | WP_042463172.1 | hypothetical protein | - |
| XF_RS06645 (XF1568) | 1521506..1521904 | + | 399 | WP_010894066.1 | hypothetical protein | - |
| XF_RS13280 | 1521855..1523405 | + | 1551 | Protein_1295 | phage terminase large subunit | - |
| XF_RS06660 (XF1571) | 1523402..1524790 | + | 1389 | WP_195780005.1 | DUF1073 domain-containing protein | - |
| XF_RS06665 (XF1572) | 1524839..1525120 | - | 282 | WP_004090283.1 | helix-turn-helix domain-containing protein | - |
| XF_RS06670 (XF1573) | 1525117..1525455 | - | 339 | WP_010894070.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| XF_RS06675 (XF1574) | 1525528..1526373 | + | 846 | WP_010894071.1 | phage head morphogenesis protein | - |
| XF_RS06680 (XF1575) | 1526373..1527563 | + | 1191 | WP_042463176.1 | DUF2213 domain-containing protein | - |
| XF_RS06685 (XF1576) | 1527591..1528073 | + | 483 | WP_010894073.1 | hypothetical protein | - |
| XF_RS06690 (XF1577) | 1528083..1529066 | + | 984 | WP_010894074.1 | DUF2184 domain-containing protein | - |
| XF_RS06695 (XF1578) | 1529130..1529429 | + | 300 | WP_010894075.1 | hypothetical protein | - |
| XF_RS06700 (XF1579) | 1529432..1529806 | + | 375 | WP_010894076.1 | DUF4054 domain-containing protein | - |
| XF_RS06705 (XF1580) | 1529803..1530276 | + | 474 | WP_010894077.1 | hypothetical protein | - |
| XF_RS06710 (XF1581) | 1530257..1530637 | + | 381 | WP_010894078.1 | hypothetical protein | - |
| XF_RS06715 (XF1582) | 1530561..1531094 | + | 534 | WP_195780009.1 | hypothetical protein | - |
| XF_RS06720 (XF1583) | 1531095..1532591 | + | 1497 | WP_010894080.1 | DUF3383 domain-containing protein | - |
| XF_RS06725 (XF1584) | 1532601..1533038 | + | 438 | WP_010894081.1 | DUF3277 family protein | - |
| XF_RS06730 (XF1585) | 1533035..1533457 | + | 423 | WP_010894082.1 | hypothetical protein | - |
| XF_RS06735 (XF1587) | 1533605..1535494 | + | 1890 | WP_010894084.1 | hypothetical protein | - |
| XF_RS06740 | 1535821..1536069 | + | 249 | WP_042463681.1 | hypothetical protein | - |
| XF_RS13285 (XF1588) | 1535977..1536321 | - | 345 | WP_209319998.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| XF_RS06745 (XF1589) | 1536445..1536873 | - | 429 | WP_010894086.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| XF_RS06750 (XF1590) | 1536874..1537128 | - | 255 | WP_042463183.1 | plasmid stabilization protein | Antitoxin Detail |
| XF_RS06755 (XF1591) | 1537240..1538010 | + | 771 | WP_010894088.1 | hypothetical protein | - |
| XF_RS06760 (XF1592) | 1538010..1538327 | + | 318 | WP_010894089.1 | hypothetical protein | - |
| XF_RS06765 (XF1593) | 1538324..1539154 | + | 831 | WP_010894090.1 | hypothetical protein | - |
| XF_RS06770 (XF1594) | 1539151..1539792 | + | 642 | WP_010894091.1 | hypothetical protein | - |
| XF_RS06775 (XF1595) | 1539789..1540142 | + | 354 | WP_010894092.1 | hypothetical protein | - |
| XF_RS06780 (XF1596) | 1540198..1540491 | - | 294 | WP_004085592.1 | putative addiction module antidote protein | Antitoxin Detail |
| XF_RS06785 (XF1597) | 1540494..1540790 | - | 297 | WP_010894094.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XF_RS06790 (XF1599) | 1540982..1541201 | + | 220 | Protein_1323 | tail fiber protein | - |
| XF_RS06795 (XF1600) | 1541391..1541837 | - | 447 | WP_031336674.1 | hypothetical protein | - |
| XF_RS06800 (XF1601) | 1542079..1543056 | - | 978 | WP_010894098.1 | hypothetical protein | - |
| XF_RS06805 (XF1602) | 1543053..1543928 | - | 876 | WP_023906641.1 | ABC transporter ATP-binding protein | - |
| XF_RS14655 | 1544107..1544268 | - | 162 | WP_155641627.1 | hypothetical protein | - |
| XF_RS06810 (XF1604) | 1544767..1545258 | + | 492 | WP_171817079.1 | glutathione peroxidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xylella fastidiosa strain U24d | Prophage | TA49813, TA49814 | NZ_CP009790 | 1514336..1540778 | 0 |