StrainHelicobacter pylori PeCan4
Repliconchromosome [Browse all T4SS(s) in this replicon]
Functioneffector translocation
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components

The information of T4SS components from NC_014555
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1HPPC_02535 (hslU)497158..498489 [+], 1332308182670ATP-dependent protease ATP-binding subunit HslU 
2HPPC_02540 (era)498489..499394 [+], 906308182671GTP-binding protein Era 
3HPPC_02545499391..500383 [+], 993308182672hypothetical protein 
4HPPC_02550500451..501305 [-], 855308182673hypothetical protein 
5HPPC_02555501386..501487 [+], 102308182674IS606 transposase 
6HPPC_02560501576..501923 [+], 348308182675cag pathogenicity island protein 1 
7HPPC_02565502151..503596 [+], 1446308182676cag pathogenicity island protein (cag3)  Cagdelta
8HPPC_02570503606..504115 [+], 510308182677cag pathogenicity island protein (cag4)  Caggamma
9HPPC_02575504255..506501 [-], 2247308182678cag pathogenicity island protein Beta  Cagbeta
10HPPC_02580506510..507502 [-], 993308182679virB11-like cag pathogenicity islandencoded protein / ATPase protein  Cagalpha
11HPPC_02585507507..508106 [-], 600308182680cag pathogenicity island protein Z  CagZ
12HPPC_02595510659..510754 [-], 96308182681hypothetical protein  CagY
13HPPC_02605513792..515357 [-], 1566308182682cag pathogenicity island protein X  CagX
14HPPC_02610515410..517017 [-], 1608308182683cag pathogenicity island protein W  CagW
15HPPC_02615517022..517780 [-], 759308182684cag island protein  CagV
16HPPC_02620518055..518702 [+], 648308182685cag pathogenicity island protein (cagU, cag11)  CagU
17HPPC_02625518718..519560 [+], 843308182686CAG pathogenicity island protein 12  CagT
18HPPC_02630519762..520361 [-], 600308182687CAG pathogenicity island protein 13 
19HPPC_02635520795..521007 [-], 213308182688hypothetical protein 
20HPPC_02640521273..521578 [+], 306308182689cag pathogenicity island protein (cagQ, cag14) 
21HPPC_02645521635..521838 [+], 204308182690hypothetical protein 
22HPPC_02650521835..521996 [-], 162308182691hypothetical protein 
23HPPC_02655523305..524435 [+], 1131308182692cag pathogenicity island protein (cagM, cag16)  CagM
24HPPC_02660524450..525361 [+], 912308182693cag pathogenicity island protein (cagN, cag17)  CagN
25HPPC_02665525442..526155 [-], 714308182694cag pathogenicity island protein L  CagL
26HPPC_02670526152..527291 [-], 1140308182695cag pathogenicity island protein I  CagI
27HPPC_02675527302..528246 [-], 945308182696cag pathogenicity island protein H  CagH
28HPPC_02680528233..528430 [+], 198308182697hypothetical protein 
29HPPC_02685528431..528859 [-], 429308182698cag pathogenicity island protein G  CagG
30HPPC_02690528914..529720 [-], 807308182699cag island protein  CagF
31HPPC_02695529722..532673 [-], 2952308182700cag pathogenicity island protein E  CagE
32HPPC_02700532682..533305 [-], 624308182701cag pathogenicity island protein D  CagD
33HPPC_02705533307..533654 [-], 348308182702cag pathogenicity island protein C  CagC
34HPPC_02710533797..534024 [-], 228308182703cag pathogenicity island protein B 
35HPPC_02715534448..538050 [+], 3603308182704cytotoxin-associated protein A 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

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Proteins        Genes

CagA; Peptidoglycan

The information of protein effectors
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProduct  *
1HPPC_02715 534448..538050 [+], 3603308182704cytotoxin-associated protein A  CagA

Download FASTA format files
Proteins        Genes
Identified as part of this study from NC_014555