SecReT4

T4SS
References

T4SS ID	213
Strain	Vibrio fischeri ES114
Replicon	plasmid pES100 [Browse all T4SS(s) in this replicon]
Accession	NC_006842
Location	25673..34531; 44060..45837
Name	VirB
Function	conjugation
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	VirB1	VirB2	VirB3	VirB4	VirB5	VirB6	VirB7	VirB8	VirB9
Number	0	1	1	1	1	1	1	1	1
Component	VirB10	VirB11	VirD4
Number	1	1	1

The information of T4SS components from NC_006842
Region 1: 25673..34531

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	VF_B0031	21087..21581 [+], 495	59714387	hypothetical protein
2	VF_B0032	21584..22063 [+], 480	59714388	transporter
3	VF_B0033	22074..23030 [+], 957	59714389	hypothetical protein
4	VF_B0034	23044..23466 [+], 423	59714390	hypothetical protein
5	VF_B0035	23639..24670 [+], 1032	59714391	trypsin protease precursor
6	VF_B0036	24642..24848 [+], 207	59714392	hypothetical protein
7	VF_B0037	24930..25562 [+], 633	59714393	hypothetical protein
8	VF_B0038	25673..25981 [+], 309	59714394	attachment mediating protein VirB2-like protein	VirB2
9	VF_B0056	25993..26295 [+], 303	172087628	type IV secretion (pTiA6 VirB3)	VirB3
10	VF_B0039	26299..28752 [+], 2454	59714395	VirB4 ATPase	VirB4
11	VF_B0057	28724..28846 [+], 123	172087629	type IV secretion (pTiA6 VirB7)	VirB7
12	VF_B0040	28836..29516 [+], 681	59714396	channel protein VirB8	VirB8
13	VF_B0041	29523..30431 [+], 909	59714397	channel protein VirB9	VirB9
14	VF_B0042	30428..31618 [+], 1191	59714398	channel protein VirB10	VirB10
15	VF_B0043	31621..32628 [+], 1008	59714399	VirB11 ATPase	VirB11
16	VF_B0044	32705..34531 [+], 1827	59714400	protein VirD4	VirD4
17	VF_B0045	34547..34897 [+], 351	59714401	single-strand DNA binding protein
18	VF_B0046	34953..36947 [+], 1995	59714402	DNA topoisomerase III
19	VF_B0047	36993..37541 [+], 549	59714403	outer membrane protein
20	VF_B0048	37574..38041 [+], 468	59714404	hypothetical protein
21	VF_B0049	37984..38427 [+], 444	59714405	hypothetical protein

Region 2: 44060..45837

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	VF_B0051	41985..42500 [+], 516	59714407	hypothetical protein
2	VF_B0052	42512..43210 [+], 699	59714408	hypothetical protein
3	VF_B0053	43214..43774 [+], 561	59714409	hypothetical protein
4	VF_B0054	44060..44800 [+], 741	59714410	attachment mediating protein VirB5-like protein	VirB5
5	VF_B0055	44803..45837 [+], 1035	59714411	channel protein VirB6	VirB6

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Ruby EG; Urbanowski M; Campbell J; Dunn A; Faini M; Gunsalus R; Lostroh P; Lupp C; McCann J; Millikan D; Schaefer A; Stabb E; Stevens A; Visick K; Whistler C; Greenberg EP (2005). Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with pathogenic congeners. Proc Natl Acad Sci U S A. 102(8):3004-9. [PudMed:15703294]